| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525367
Identifier: 222525367
GI number: 222525367
Start: 2685888
End: 2686322
Strand: Reverse
Name: 222525367
Synonym: Chy400_2112
Alternate gene names: NA
Gene position: 2686322-2685888 (Counterclockwise)
Preceding gene: 222525368
Following gene: 222525366
Centisome position: 50.98
GC content: 56.09
Gene sequence:
>435_bases ATGCCACGCCTGAGTCGCTATTTCATCCGTGCTTCGCTGATATATTTGTTGCTGGGGCTTACCGCCGGCGCACTGATACT TACTAACAAAGGTATCCCTTTTGCGCCGTTGGTCTGGGTCTTGCTCCCGCTACACATCGAGACGATGTTTGTGGGATGGA TGAGTCAACTGGCGTTGGGGGTTGCGTTCTGGATTTTGCCCAGGCTGGCAGGGGATGCGCCGCGCGGGAACGAACGCTGG AGCTGGGCCGCTTTGGTATTGATCAATCTCGGCCTGATCGTTGCGATGGCTGCGCCGTTTAGCCAATGGCCCTGGCCGAG CACGCTGGCCCGTTCGCTTGAAGCGGTAGGATTCATTGCGTTTGTCTTGGGGAACTGGCGACGAATCTATTCGCCCACAT TTGGGTTGCAAACACTGAGAAGAAACCAGGGTTGA
Upstream 100 bases:
>100_bases CATCGTTGGGGGTTGGATGCTGGTGCTTTCCGCCCTCTTGCAATGGCTGGCAGGGGTTGGTTTCATCATTAACATCTGGC CACGGGTGAGGGGTAAATAG
Downstream 100 bases:
>100_bases AGAGCGAAACGACCGCCAGGTTGTAACTATCGAGGGGGGAGATGTGCTACGCCGCGTATGGATTGGCCTGCTATGGTTGC TCGTGGTGGGGAGCAGTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MPRLSRYFIRASLIYLLLGLTAGALILTNKGIPFAPLVWVLLPLHIETMFVGWMSQLALGVAFWILPRLAGDAPRGNERW SWAALVLINLGLIVAMAAPFSQWPWPSTLARSLEAVGFIAFVLGNWRRIYSPTFGLQTLRRNQG
Sequences:
>Translated_144_residues MPRLSRYFIRASLIYLLLGLTAGALILTNKGIPFAPLVWVLLPLHIETMFVGWMSQLALGVAFWILPRLAGDAPRGNERW SWAALVLINLGLIVAMAAPFSQWPWPSTLARSLEAVGFIAFVLGNWRRIYSPTFGLQTLRRNQG >Mature_143_residues PRLSRYFIRASLIYLLLGLTAGALILTNKGIPFAPLVWVLLPLHIETMFVGWMSQLALGVAFWILPRLAGDAPRGNERWS WAALVLINLGLIVAMAAPFSQWPWPSTLARSLEAVGFIAFVLGNWRRIYSPTFGLQTLRRNQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16118; Mature: 15987
Theoretical pI: Translated: 12.09; Mature: 12.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLSRYFIRASLIYLLLGLTAGALILTNKGIPFAPLVWVLLPLHIETMFVGWMSQLALG CCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VAFWILPRLAGDAPRGNERWSWAALVLINLGLIVAMAAPFSQWPWPSTLARSLEAVGFIA HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH FVLGNWRRIYSPTFGLQTLRRNQG HHHHCCHHHHCCHHHHHHHHHCCC >Mature Secondary Structure PRLSRYFIRASLIYLLLGLTAGALILTNKGIPFAPLVWVLLPLHIETMFVGWMSQLALG CCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VAFWILPRLAGDAPRGNERWSWAALVLINLGLIVAMAAPFSQWPWPSTLARSLEAVGFIA HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH FVLGNWRRIYSPTFGLQTLRRNQG HHHHCCHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA