| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525359
Identifier: 222525359
GI number: 222525359
Start: 2675366
End: 2675923
Strand: Reverse
Name: 222525359
Synonym: Chy400_2104
Alternate gene names: NA
Gene position: 2675923-2675366 (Counterclockwise)
Preceding gene: 222525366
Following gene: 222525354
Centisome position: 50.79
GC content: 58.42
Gene sequence:
>558_bases ATGATTGCATCCAACGCAACGGCTGGCGGCTTTGTGGCTGCGACACCGCGACCAACTGCTACCCCACGCCCTACGGCTGC ACCTGCCCCAACGCAGCCCCCGGCGGCTCAACCAACCACCGCTCCGGCCACGCAGGCAGCCAATGCACCGGGTGGTTCGA ATGTGGTCAATGAAACGCCTGCCCAAACAGTTGAGGTACGTGCTGCTCCAGATGCCCTGGCGTTTGCCCAAACATCACTC TCCTTACCGGCAAATACGGTCGTGCGCCTCGATTTCGTCAATCAGAATAACCTGGGTGTCCAACACAACTGGGTGCTGGT AAATGGTGGCGATGATGTAGCCGCCGCTGTCAATACTGCCGCTCAAAATAACGCCGATGCTCTCTTCGTGCCACCACCTG ACACCCCAAATGCACTGGCCTGGACGGCGATGCTCAATGCTGGCGAGAGTGGCAGCGTCACATTCCGTACTCCAGCCCCG GGTACATACCTTTACATTTGTACCTTCCCCGGGCACTATCTGGCCGGTATGAAGGGAACATTAACGGTAACGCCGTAG
Upstream 100 bases:
>100_bases TAATGGAGGTTCGACGTTTTCGGGAGGAAGCGCCGGTGGGCCACCATTGATTGTGATGATGGGTCTGGCATTCGGTGCTG GTTTGATTATGTTGATTGTC
Downstream 100 bases:
>100_bases CGATTTTCTGATGCCGACGGTTGCGGCTAGTCGTTTACGCGACGTTCCAGCACTGCCATGACTTCAACGTGTGGTGTGTG CGGAAACATATCGTAGCCGC
Product: blue (type 1) copper domain-containing protein
Products: NA
Alternate protein names: Ac-B
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MIASNATAGGFVAATPRPTATPRPTAAPAPTQPPAAQPTTAPATQAANAPGGSNVVNETPAQTVEVRAAPDALAFAQTSL SLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFRTPAP GTYLYICTFPGHYLAGMKGTLTVTP
Sequences:
>Translated_185_residues MIASNATAGGFVAATPRPTATPRPTAAPAPTQPPAAQPTTAPATQAANAPGGSNVVNETPAQTVEVRAAPDALAFAQTSL SLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFRTPAP GTYLYICTFPGHYLAGMKGTLTVTP >Mature_185_residues MIASNATAGGFVAATPRPTATPRPTAAPAPTQPPAAQPTTAPATQAANAPGGSNVVNETPAQTVEVRAAPDALAFAQTSL SLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFRTPAP GTYLYICTFPGHYLAGMKGTLTVTP
Specific function: Can donate electrons to cytochrome c-554
COG id: COG3241
COG function: function code C; Azurin
Gene ontology:
Cell location: Membrane; Peripheral membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 plastocyanin-like domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AURB_CHLAA (P27197)
Other databases:
- EMBL: U78046 - EMBL: CP000909 - RefSeq: YP_001635554.1 - PDB: 1OV8 - PDB: 1QHQ - PDBsum: 1OV8 - PDBsum: 1QHQ - ProteinModelPortal: P27197 - SMR: P27197 - GeneID: 5826401 - GenomeReviews: CP000909_GR - KEGG: cau:Caur_1950 - HOGENOM: HBG653810 - OMA: HYLAGMK - ProtClustDB: CLSK2477013 - GO: GO:0006810 - InterPro: IPR000923 - InterPro: IPR002355 - InterPro: IPR008972 - Gene3D: G3DSA:2.60.40.420
Pfam domain/function: PF00127 Copper-bind; SSF49503 Cupredoxin
EC number: NA
Molecular weight: Translated: 18713; Mature: 18713
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00196 COPPER_BLUE; PS00079 MULTICOPPER_OXIDASE1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIASNATAGGFVAATPRPTATPRPTAAPAPTQPPAAQPTTAPATQAANAPGGSNVVNETP CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AQTVEVRAAPDALAFAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTA CCEEEEEECCCCEEEEECCCCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCEEEEEHHC AQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGT CCCCCCEEEECCCCCCCCEEEEEEECCCCCCCEEEECCCCCCEEEEEECCCHHHCCCCEE LTVTP EEECC >Mature Secondary Structure MIASNATAGGFVAATPRPTATPRPTAAPAPTQPPAAQPTTAPATQAANAPGGSNVVNETP CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AQTVEVRAAPDALAFAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTA CCEEEEEECCCCEEEEECCCCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCEEEEEHHC AQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGT CCCCCCEEEECCCCCCCCEEEEEEECCCCCCCEEEECCCCCCEEEEEECCCHHHCCCCEE LTVTP EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1313011; 11178893