| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525330
Identifier: 222525330
GI number: 222525330
Start: 2633203
End: 2634417
Strand: Reverse
Name: 222525330
Synonym: Chy400_2072
Alternate gene names: NA
Gene position: 2634417-2633203 (Counterclockwise)
Preceding gene: 222525331
Following gene: 222525328
Centisome position: 50.0
GC content: 58.19
Gene sequence:
>1215_bases TTGCCTGCCAAACGGCGGATCGTTTTTCTCTTGCCAATGGGCATTGAACGGCCTTCCGGGAGGCGTTATCTCAACATTGC GCGCGGTCTGGTTCAGCAAGGGTTCCAGGTGCGCATCCTGGCCCTCCATCCTGATCTCGCCAGTTGTGCCCAACGCCGGT TTGTAATCGATGGTGTTGAGGTCTGGTATGTCGGACAGATGCACGCACGCAAGGTCGGTAGCACACCGGTACGATTTACT CCTCTTGAACTACTTTTTGTGCTGCTCTCCTCAACACTTGGCATGATGTGGGGGGTGCTGTGCTCGCCGGCAGAGTGGTA TCATCTGGGAAAACCACAACCGATCAACGGCCTGGCGGCGCTGCTTGCAGTGCGTCTCTGGCGGCGACAGCCATTTCTTG TCGATTGCGACGATGACGAGGTAACGGCCAACCGCTTTACTGCACGCTGGCAACGGGCCGTCTTTGCCTTCTGGCAATGG CTGTTGCCGCGTCTGGCCGCTGGCATTACCGTCAATACCCGCTATCTGGCAGATCGAATGGCCCGGCTGCAACGCCCCTG CGTCATTGTGCCCAACGGTGTGGCCCGTGATTTTCTCCCGCCACCACAACCAATCCGCACAGCTCTCAGGCAGGCGTTGA GATTACCCGCAGGGCCGGTGATTGCCTATGCAGGAACCCTGGCTCTCCACAACCATCCAGTTGATCTCCTGTTGCAGGCC TTTGCTCAGATTATCATCCACTACCCAACGGCACGCTTGTTGCTGATCGGTGGCGGTGAGGATTTGCCGGTTATCCAACG CTATGTATCACAACAATCCTGGCGCAACCAGGTTCTTTTGACCGGTCATGTTTCGCATCAGACGGTACGCGCTTTACTGG CATTAGCCGATCTCAGTGTTGATCCAGTTTACGATGATGCGGTAGCGCGTGCTCGCTGGCCACTCAAGATCGCGGAAAGT CTGGCTTTGGGTGTGCCGGTGGTGACCGGCGATGTTGGGGATCGCGCCGAAATCCTGGGGTACGGTACAGCCGGGATCGT GGTACCGCCTGGTGACGCCACAGCACTGGCCACAGGCATTACAGAACTGCTAGCCGACCCGGCACGCCTGACAGCAATGG CCGCCGCAGCTCAGGTGCAGGCGAAGCGGTACGATTGGGAGCTGCTGTCCAAGCGTTGGGCAACGATCTATGATTGGGTG TCACGCACCTCGTAG
Upstream 100 bases:
>100_bases GTCAATCATTACCGATCTGGCACACGAACTGAACCGAAGATAGATGTTTCTTGCAGAATACATGAATATATTCGCACATA CCCGTCAGCAACAGGGGAAA
Downstream 100 bases:
>100_bases TCAGAACAGATTCTATTCCTGACTCTCCATTATTATCGTTGGGACAAGGGGGATCGGTGTAGCGAATACTGGAACAGGTC ACTACTGCCCCGGAATAAAG
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Stealth protein SCO2592 [H]
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MPAKRRIVFLLPMGIERPSGRRYLNIARGLVQQGFQVRILALHPDLASCAQRRFVIDGVEVWYVGQMHARKVGSTPVRFT PLELLFVLLSSTLGMMWGVLCSPAEWYHLGKPQPINGLAALLAVRLWRRQPFLVDCDDDEVTANRFTARWQRAVFAFWQW LLPRLAAGITVNTRYLADRMARLQRPCVIVPNGVARDFLPPPQPIRTALRQALRLPAGPVIAYAGTLALHNHPVDLLLQA FAQIIIHYPTARLLLIGGGEDLPVIQRYVSQQSWRNQVLLTGHVSHQTVRALLALADLSVDPVYDDAVARARWPLKIAES LALGVPVVTGDVGDRAEILGYGTAGIVVPPGDATALATGITELLADPARLTAMAAAAQVQAKRYDWELLSKRWATIYDWV SRTS
Sequences:
>Translated_404_residues MPAKRRIVFLLPMGIERPSGRRYLNIARGLVQQGFQVRILALHPDLASCAQRRFVIDGVEVWYVGQMHARKVGSTPVRFT PLELLFVLLSSTLGMMWGVLCSPAEWYHLGKPQPINGLAALLAVRLWRRQPFLVDCDDDEVTANRFTARWQRAVFAFWQW LLPRLAAGITVNTRYLADRMARLQRPCVIVPNGVARDFLPPPQPIRTALRQALRLPAGPVIAYAGTLALHNHPVDLLLQA FAQIIIHYPTARLLLIGGGEDLPVIQRYVSQQSWRNQVLLTGHVSHQTVRALLALADLSVDPVYDDAVARARWPLKIAES LALGVPVVTGDVGDRAEILGYGTAGIVVPPGDATALATGITELLADPARLTAMAAAAQVQAKRYDWELLSKRWATIYDWV SRTS >Mature_403_residues PAKRRIVFLLPMGIERPSGRRYLNIARGLVQQGFQVRILALHPDLASCAQRRFVIDGVEVWYVGQMHARKVGSTPVRFTP LELLFVLLSSTLGMMWGVLCSPAEWYHLGKPQPINGLAALLAVRLWRRQPFLVDCDDDEVTANRFTARWQRAVFAFWQWL LPRLAAGITVNTRYLADRMARLQRPCVIVPNGVARDFLPPPQPIRTALRQALRLPAGPVIAYAGTLALHNHPVDLLLQAF AQIIIHYPTARLLLIGGGEDLPVIQRYVSQQSWRNQVLLTGHVSHQTVRALLALADLSVDPVYDDAVARARWPLKIAESL ALGVPVVTGDVGDRAEILGYGTAGIVVPPGDATALATGITELLADPARLTAMAAAAQVQAKRYDWELLSKRWATIYDWVS RTS
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the stealth family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 44822; Mature: 44691
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAKRRIVFLLPMGIERPSGRRYLNIARGLVQQGFQVRILALHPDLASCAQRRFVIDGVE CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHCCEEECCEE VWYVGQMHARKVGSTPVRFTPLELLFVLLSSTLGMMWGVLCSPAEWYHLGKPQPINGLAA EEEECCHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHH LLAVRLWRRQPFLVDCDDDEVTANRFTARWQRAVFAFWQWLLPRLAAGITVNTRYLADRM HHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHH ARLQRPCVIVPNGVARDFLPPPQPIRTALRQALRLPAGPVIAYAGTLALHNHPVDLLLQA HHHCCCEEEECCCCHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCEECCCCHHHHHHH FAQIIIHYPTARLLLIGGGEDLPVIQRYVSQQSWRNQVLLTGHVSHQTVRALLALADLSV HHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCC DPVYDDAVARARWPLKIAESLALGVPVVTGDVGDRAEILGYGTAGIVVPPGDATALATGI CCCHHHHHHHCCCCHHHHHHHHHCCCEEECCCCCCCCEEEECCCCEEECCCCHHHHHHHH TELLADPARLTAMAAAAQVQAKRYDWELLSKRWATIYDWVSRTS HHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PAKRRIVFLLPMGIERPSGRRYLNIARGLVQQGFQVRILALHPDLASCAQRRFVIDGVE CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHCCEEECCEE VWYVGQMHARKVGSTPVRFTPLELLFVLLSSTLGMMWGVLCSPAEWYHLGKPQPINGLAA EEEECCHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHH LLAVRLWRRQPFLVDCDDDEVTANRFTARWQRAVFAFWQWLLPRLAAGITVNTRYLADRM HHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHH ARLQRPCVIVPNGVARDFLPPPQPIRTALRQALRLPAGPVIAYAGTLALHNHPVDLLLQA HHHCCCEEEECCCCHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCEECCCCHHHHHHH FAQIIIHYPTARLLLIGGGEDLPVIQRYVSQQSWRNQVLLTGHVSHQTVRALLALADLSV HHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCC DPVYDDAVARARWPLKIAESLALGVPVVTGDVGDRAEILGYGTAGIVVPPGDATALATGI CCCHHHHHHHCCCCHHHHHHHHHCCCEEECCCCCCCCEEEECCCCEEECCCCHHHHHHHH TELLADPARLTAMAAAAQVQAKRYDWELLSKRWATIYDWVSRTS HHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]