| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525327
Identifier: 222525327
GI number: 222525327
Start: 2628044
End: 2628880
Strand: Reverse
Name: 222525327
Synonym: Chy400_2069
Alternate gene names: NA
Gene position: 2628880-2628044 (Counterclockwise)
Preceding gene: 222525328
Following gene: 222525321
Centisome position: 49.89
GC content: 53.76
Gene sequence:
>837_bases ATGGGTACCGTATTCGTGATGTGGTTAGCAATGCTCAGTTCTATCCAGCTCGCGAATATCGGCGTCAACATCGAGTTACC CCTACGCAACGCGCAAGTCGGTCGTCTCCTCGCTACCAGTTTCTGTCTGGTTTTACAGGGTTGGTTGCTCGCGATCACCC CATCACTTGCATTACGCCTGTATCCAATATTTGCGCAACCGACACCCATATCACCGGTGCAACTGCTGGCTCGTATACTG GCGTTGTGGGGAATGATGTTGATCATCATCATTATTGCCGTGCCTTTCCTCAGCATCTTGCCTCTCTTCGGGAGTCTGAG TCTGGCCGAGATGATCTGGGTGCTGATCGTGATCGTGATGACGAATCTCCTGCTTTGTACGATATGTATCTGTTGGCTCA CTCTGGCCCGAACACCACCGGCAGGTTTGTTTGCGACATACGGTACAATTCTGGCCTGGTTGATCGTGCCAATCCTGCTG ATTGCCACTAACGCTGTCCCTCCTGCTTCGGCACGGGTGATCGCTGCCTTCAACCCATTGACTGCCCTGGTCGCACCGTT GGCACCAGCCTTCCCGCTCGATGGGCCGATTGCAAATAACCTGGATATGCTGCTCCAGATTACCCACGGCGCTATCGAGC GAACTGTACCACTACACCAACCTTATCTGGCCGGCAGCGGTCTTATAGGATGGCTGATCTTTGGTCTGACCAGTTTTCTT GCCCGCCCTCTGCCCCGTCGCTGGCAACGCTTCGATACGCTCTGGCTGATTGGGCTGGTGGTCTATCTAATATTCATGTT TTTGGAGCCTGAATGGTGGAGCGCAGCGTTCCGTTGA
Upstream 100 bases:
>100_bases TTATTGTCACCGGTGGGGTGCAGGGAGTTGTGCCGTGATAGCAGCATTCCAGGGTGCATGGCAGCAGCTCGTTCAAAGCC GACGGGTGAGCATATGCGTG
Downstream 100 bases:
>100_bases ATTGTCAGGAGGAAGGAGAAAATAGGGTGGAGGAAGGAGGAAATAGGGTGGAGAAGAGAGGAAATAGGGTGGAGGAGGGA GGAAATAGGGTGATAGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MGTVFVMWLAMLSSIQLANIGVNIELPLRNAQVGRLLATSFCLVLQGWLLAITPSLALRLYPIFAQPTPISPVQLLARIL ALWGMMLIIIIIAVPFLSILPLFGSLSLAEMIWVLIVIVMTNLLLCTICICWLTLARTPPAGLFATYGTILAWLIVPILL IATNAVPPASARVIAAFNPLTALVAPLAPAFPLDGPIANNLDMLLQITHGAIERTVPLHQPYLAGSGLIGWLIFGLTSFL ARPLPRRWQRFDTLWLIGLVVYLIFMFLEPEWWSAAFR
Sequences:
>Translated_278_residues MGTVFVMWLAMLSSIQLANIGVNIELPLRNAQVGRLLATSFCLVLQGWLLAITPSLALRLYPIFAQPTPISPVQLLARIL ALWGMMLIIIIIAVPFLSILPLFGSLSLAEMIWVLIVIVMTNLLLCTICICWLTLARTPPAGLFATYGTILAWLIVPILL IATNAVPPASARVIAAFNPLTALVAPLAPAFPLDGPIANNLDMLLQITHGAIERTVPLHQPYLAGSGLIGWLIFGLTSFL ARPLPRRWQRFDTLWLIGLVVYLIFMFLEPEWWSAAFR >Mature_277_residues GTVFVMWLAMLSSIQLANIGVNIELPLRNAQVGRLLATSFCLVLQGWLLAITPSLALRLYPIFAQPTPISPVQLLARILA LWGMMLIIIIIAVPFLSILPLFGSLSLAEMIWVLIVIVMTNLLLCTICICWLTLARTPPAGLFATYGTILAWLIVPILLI ATNAVPPASARVIAAFNPLTALVAPLAPAFPLDGPIANNLDMLLQITHGAIERTVPLHQPYLAGSGLIGWLIFGLTSFLA RPLPRRWQRFDTLWLIGLVVYLIFMFLEPEWWSAAFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30597; Mature: 30466
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTVFVMWLAMLSSIQLANIGVNIELPLRNAQVGRLLATSFCLVLQGWLLAITPSLALRL CCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YPIFAQPTPISPVQLLARILALWGMMLIIIIIAVPFLSILPLFGSLSLAEMIWVLIVIVM EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH TNLLLCTICICWLTLARTPPAGLFATYGTILAWLIVPILLIATNAVPPASARVIAAFNPL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHH TALVAPLAPAFPLDGPIANNLDMLLQITHGAIERTVPLHQPYLAGSGLIGWLIFGLTSFL HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH ARPLPRRWQRFDTLWLIGLVVYLIFMFLEPEWWSAAFR HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCC >Mature Secondary Structure GTVFVMWLAMLSSIQLANIGVNIELPLRNAQVGRLLATSFCLVLQGWLLAITPSLALRL CHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YPIFAQPTPISPVQLLARILALWGMMLIIIIIAVPFLSILPLFGSLSLAEMIWVLIVIVM EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH TNLLLCTICICWLTLARTPPAGLFATYGTILAWLIVPILLIATNAVPPASARVIAAFNPL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHH TALVAPLAPAFPLDGPIANNLDMLLQITHGAIERTVPLHQPYLAGSGLIGWLIFGLTSFL HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH ARPLPRRWQRFDTLWLIGLVVYLIFMFLEPEWWSAAFR HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA