| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525286
Identifier: 222525286
GI number: 222525286
Start: 2567397
End: 2567957
Strand: Direct
Name: 222525286
Synonym: Chy400_2027
Alternate gene names: NA
Gene position: 2567397-2567957 (Clockwise)
Preceding gene: 222525284
Following gene: 222525288
Centisome position: 48.73
GC content: 58.82
Gene sequence:
>561_bases ATGGAATCACCTGCGTTAAGTTCACTTATCCCGCATCTCCTGGCACTCAAATTGCTGCCGCGCACCGGTTGGTTACAACG TGGAGTACGTGATGTCGAAAGTGTTGCCGAACACTCGTTTGGAGTGGCGGTTCTCTGTCTGCTGATCGGGGATCAGATTG CCGACATTGATCGCGGGCGATTGCTGGCAATTGCCTTGTTGCACGACCTGGCCGAGTCGCTGTTGAGCGATTTGCCGGCA TCGGCCACTCGACTACTTGGCAAAGAGGCGAAGCGCCAGGCCGAACGGGATGGCCTGGCGGCGTTGATCGGTCATCTGTC CCGCAGTGATGAGTATCTCACGCTGTGGGATGAGTATGTTGACGGTACCTCACGGGAGGCCCGGTTGGTCAAAGCGGTTG ATCGGCTTGAGCTGATGGCTCAGGCGCTGGCCTACGAACGCAGCGGTGTCCGCGGTCTTGACTCATTCTGGCCGCTCGAT GACGAGTGGGCAACAGAGTTTCCGCCAGTCGCCGCGTTGGCCGCACATTTACGTACCGAACGCAGCCGGTCGTCCGGTTG A
Upstream 100 bases:
>100_bases GCGATGACGTTTCTTGAACTGGATTTGACTTAGTCATTGTTGTTACCTATACACGATTGGCAATCCCATGCATGTATCAG ACATTTCTGGAAAGAATCAC
Downstream 100 bases:
>100_bases TCCTCACTGTGCGGCCCGTCGGATCGCTCCATCGAGATCTGCCCAGAGATCATCAACATCTTCAATCCCAACGCTAAGCC GCAGTAGCGTGGGTGGCAGA
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: Metal-Dependent Phosphohydrolase; Metal-Dependent Phosphohydrolase HD Superfamily; HAD Superfamily Hydrolase; HD Superfamily Hydrolase; Xin-Antitoxin System Toxin Component PIN Family; Nucleotidase; HD Superfamily Metal-Dependent Phosphohydrolase; HD Domain Protein; Oxetanocin-Like Protein; Hd Superfamily Hydrolase
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MESPALSSLIPHLLALKLLPRTGWLQRGVRDVESVAEHSFGVAVLCLLIGDQIADIDRGRLLAIALLHDLAESLLSDLPA SATRLLGKEAKRQAERDGLAALIGHLSRSDEYLTLWDEYVDGTSREARLVKAVDRLELMAQALAYERSGVRGLDSFWPLD DEWATEFPPVAALAAHLRTERSRSSG
Sequences:
>Translated_186_residues MESPALSSLIPHLLALKLLPRTGWLQRGVRDVESVAEHSFGVAVLCLLIGDQIADIDRGRLLAIALLHDLAESLLSDLPA SATRLLGKEAKRQAERDGLAALIGHLSRSDEYLTLWDEYVDGTSREARLVKAVDRLELMAQALAYERSGVRGLDSFWPLD DEWATEFPPVAALAAHLRTERSRSSG >Mature_186_residues MESPALSSLIPHLLALKLLPRTGWLQRGVRDVESVAEHSFGVAVLCLLIGDQIADIDRGRLLAIALLHDLAESLLSDLPA SATRLLGKEAKRQAERDGLAALIGHLSRSDEYLTLWDEYVDGTSREARLVKAVDRLELMAQALAYERSGVRGLDSFWPLD DEWATEFPPVAALAAHLRTERSRSSG
Specific function: Unknown
COG id: COG1896
COG function: function code R; Predicted hydrolases of HD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI116875826, Length=174, Percent_Identity=31.0344827586207, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6319719, Length=150, Percent_Identity=33.3333333333333, Blast_Score=91, Evalue=9e-20, Organism=Saccharomyces cerevisiae, GI6321337, Length=149, Percent_Identity=32.8859060402685, Blast_Score=82, Evalue=4e-17, Organism=Drosophila melanogaster, GI24582262, Length=154, Percent_Identity=31.8181818181818, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24582260, Length=154, Percent_Identity=31.8181818181818, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI20129283, Length=154, Percent_Identity=31.8181818181818, Blast_Score=79, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20433; Mature: 20433
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESPALSSLIPHLLALKLLPRTGWLQRGVRDVESVAEHSFGVAVLCLLIGDQIADIDRGR CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LLAIALLHDLAESLLSDLPASATRLLGKEAKRQAERDGLAALIGHLSRSDEYLTLWDEYV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC DGTSREARLVKAVDRLELMAQALAYERSGVRGLDSFWPLDDEWATEFPPVAALAAHLRTE CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHH RSRSSG HHCCCC >Mature Secondary Structure MESPALSSLIPHLLALKLLPRTGWLQRGVRDVESVAEHSFGVAVLCLLIGDQIADIDRGR CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LLAIALLHDLAESLLSDLPASATRLLGKEAKRQAERDGLAALIGHLSRSDEYLTLWDEYV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC DGTSREARLVKAVDRLELMAQALAYERSGVRGLDSFWPLDDEWATEFPPVAALAAHLRTE CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHH RSRSSG HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA