| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525223
Identifier: 222525223
GI number: 222525223
Start: 2492132
End: 2493034
Strand: Direct
Name: 222525223
Synonym: Chy400_1963
Alternate gene names: NA
Gene position: 2492132-2493034 (Clockwise)
Preceding gene: 222525222
Following gene: 222525224
Centisome position: 47.3
GC content: 46.29
Gene sequence:
>903_bases ATGACAAATCAAACCATCACGCATATTGGTTTCAGCGACGAGTCCAACTGGAATACGGGGCGATTTCGCAGTCTTGGGTT GGTGACTTTGCCAATCTGCCATCTTGATAGCTTCAATCGTGAACTTTGCAGTCTTCTCAGAGAATCTCAGATACACGAGT TCAAGTGGAACAAGGTAAATGGTGCCAAAGAGCGATTTGCAGCGCAAAAGATGTGTCATTTCGCAATTGAAAAGGCGCGA AATGATCAGTTACGTGTAGATGTGCTCATCTGGAATATTCAAGACAGTCGGCACAGCATCAAGGGGAGAGACGACGTCGC TAATCTCGAGCGGATGTATTATCATCTTTTTCGCAATGTGATGAGGGCACGATGGCCGAATAATGCCGTTTGGAGACTTC ATCCCGATGAGCACACTGGCTTTGATTGGAAGACAATTCAGGACTGCCTTAAAGCCAAAAGTGTGACTTTCAAAGAAGAA CATCCGCTCTTTAGCGGTGGTTTCAGAGTCAGGCTACACCAGGAATTTGGTATCGAAGAGATTCGACAGGTATCGTCTCA GCAACATCTACTGCTGCAAATTGCCGACCTGTTCGCCGGTTTAGCCGTGTTCTCCTATGAAAAATATGAGAAATACGAGC AGTGGATCAATACTCAATCGTCCCAGTTGACTTTATTCGGTAACGAGCAGCATTCAGCGAACGAATCACCAACACGCAGC GAGAATGAACGCTTTCAAGTTCTTAAGACGTTTGATGATCGATGCAAACAGCTCAAGCTTGGGGTCAGCCTTAAGAGCAA TCGCGGACTACGGACACCTGATCCGAACAATCCGATTAACTTCTGGATGTATGAACCACAACATCCCGAAGACCGCGCAC CTGTAAAGAATACGAAGTCGTAG
Upstream 100 bases:
>100_bases GGTGTGATTACAGACAGATATTTTTTGTGCAACGTGCTCCTGTCGAAGTTTATTCTTAGGTATATCTGAATAATGCGGAA TGGTTTTGGTAGGGGCGATT
Downstream 100 bases:
>100_bases GAGCGACGCATGCGTCGCTCCGACCCTGAACGGCAACGCACAATCTAGGGACGACACGTGTGTCGTTCCAATCCCCGGAG GACGTATGGCGCATTTGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTNQTITHIGFSDESNWNTGRFRSLGLVTLPICHLDSFNRELCSLLRESQIHEFKWNKVNGAKERFAAQKMCHFAIEKAR NDQLRVDVLIWNIQDSRHSIKGRDDVANLERMYYHLFRNVMRARWPNNAVWRLHPDEHTGFDWKTIQDCLKAKSVTFKEE HPLFSGGFRVRLHQEFGIEEIRQVSSQQHLLLQIADLFAGLAVFSYEKYEKYEQWINTQSSQLTLFGNEQHSANESPTRS ENERFQVLKTFDDRCKQLKLGVSLKSNRGLRTPDPNNPINFWMYEPQHPEDRAPVKNTKS
Sequences:
>Translated_300_residues MTNQTITHIGFSDESNWNTGRFRSLGLVTLPICHLDSFNRELCSLLRESQIHEFKWNKVNGAKERFAAQKMCHFAIEKAR NDQLRVDVLIWNIQDSRHSIKGRDDVANLERMYYHLFRNVMRARWPNNAVWRLHPDEHTGFDWKTIQDCLKAKSVTFKEE HPLFSGGFRVRLHQEFGIEEIRQVSSQQHLLLQIADLFAGLAVFSYEKYEKYEQWINTQSSQLTLFGNEQHSANESPTRS ENERFQVLKTFDDRCKQLKLGVSLKSNRGLRTPDPNNPINFWMYEPQHPEDRAPVKNTKS >Mature_299_residues TNQTITHIGFSDESNWNTGRFRSLGLVTLPICHLDSFNRELCSLLRESQIHEFKWNKVNGAKERFAAQKMCHFAIEKARN DQLRVDVLIWNIQDSRHSIKGRDDVANLERMYYHLFRNVMRARWPNNAVWRLHPDEHTGFDWKTIQDCLKAKSVTFKEEH PLFSGGFRVRLHQEFGIEEIRQVSSQQHLLLQIADLFAGLAVFSYEKYEKYEQWINTQSSQLTLFGNEQHSANESPTRSE NERFQVLKTFDDRCKQLKLGVSLKSNRGLRTPDPNNPINFWMYEPQHPEDRAPVKNTKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35336; Mature: 35205
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNQTITHIGFSDESNWNTGRFRSLGLVTLPICHLDSFNRELCSLLRESQIHEFKWNKVN CCCCEEEEEECCCCCCCCCCCEEECCEEEEHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC GAKERFAAQKMCHFAIEKARNDQLRVDVLIWNIQDSRHSIKGRDDVANLERMYYHLFRNV CHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH MRARWPNNAVWRLHPDEHTGFDWKTIQDCLKAKSVTFKEEHPLFSGGFRVRLHQEFGIEE HHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHCCHHH IRQVSSQQHLLLQIADLFAGLAVFSYEKYEKYEQWINTQSSQLTLFGNEQHSANESPTRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC ENERFQVLKTFDDRCKQLKLGVSLKSNRGLRTPDPNNPINFWMYEPQHPEDRAPVKNTKS CCHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure TNQTITHIGFSDESNWNTGRFRSLGLVTLPICHLDSFNRELCSLLRESQIHEFKWNKVN CCCEEEEEECCCCCCCCCCCEEECCEEEEHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC GAKERFAAQKMCHFAIEKARNDQLRVDVLIWNIQDSRHSIKGRDDVANLERMYYHLFRNV CHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH MRARWPNNAVWRLHPDEHTGFDWKTIQDCLKAKSVTFKEEHPLFSGGFRVRLHQEFGIEE HHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHCCHHH IRQVSSQQHLLLQIADLFAGLAVFSYEKYEKYEQWINTQSSQLTLFGNEQHSANESPTRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC ENERFQVLKTFDDRCKQLKLGVSLKSNRGLRTPDPNNPINFWMYEPQHPEDRAPVKNTKS CCHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1336177 [H]