Click here to switch to the map view.

The map label for this gene is amsE [H]

Identifier: 222525216

GI number: 222525216

Start: 2482103

End: 2483146

Strand: Reverse

Name: amsE [H]

Synonym: Chy400_1956

Alternate gene names: 222525216

Gene position: 2483146-2482103 (Counterclockwise)

Preceding gene: 222525217

Following gene: 222525214

Centisome position: 47.13

GC content: 56.7

Gene sequence:

>1044_bases
ATGCTAAATTTGGGGTCATATCCCATTGCAATGATCAAACCGCTTATTTCGGTTCTGCTGCCAATTCGCAACGCCGCTGC
AACACTACCGGTGTGCCTGCAATCACTGGCCCGGCAAACCTTTACCAATTACGAAGTACTGGCAATTGATGATGGTTCGA
GTGATGAGTCACCGATGATCATCGCAGCGGCAGCGGCTCGCGATGCCCGCATTGTGCCGATTATTGCCGGCAGAATTGGC
TTGCCTGCTGCCCTCAATCTTGGGTTGACATTAGCTCGTGCTCCGATTATTGCCCGGATGGACGCAGATGACGCGATGCA
CCCAACCCGGCTAGAACGTCAATACCACGCCCTCCAGGTGAATCCTGATCTGGCGCTGATTGCAAGTCGGGTGGTCGCCT
TTCCGGCGCGTGCAATACGCGCCGGCCTGCGCGAATATTTGCGCTGGCAGAATCAGGTGTTAACCTCGGAGCAAATAGCT
GCCGAAATTTACGTTGAGGCTCCGTTCGTCCATCCATCGGTAATGTTTCGGCGGGCAGTCGTGCAAGAATTGGGTGGCTA
TACCGATCACTCCTGGCCGGAAGACTACGAATTATGGCTGCGGATGCACGCTGCTGGGATGCGGATGCACAAGCTACCAG
GCAACCTGCTAGCCTGGCGTGAACATCCAACGCGAGCAACCCGAGTAGACCCAAGGTATGCACGAGACGCCTTTGACACC
CTGCGTGCTACATACCTGGCCCGTGATCCCCGTCTGCATAGTGGACGACCACTGGTATACTGGGGAGCAGGGCGGGTCAC
CCGGCAGCGTGCCCGCCGCCTGATCGAACGGGGCTTTCCCCCATTTGCCTGGATCGACATCGATCCGGCAAAGATTGGAC
AGACTATCTGGGGAGCACCGGTACATGCACCAGCCTGGCTAAATCGACAACCGCGTCCATTCGTACTGGTCTATGTAACC
AATCACGGCGCTCGCGATCTGATTGCTGGTTGGCTTGGGGAGATGGGATACCAGCCCGGCCGTGATTATTTGGGGGTGGG
GTAA

Upstream 100 bases:

>100_bases
GAGGTTTATGTGTCTGGTATTGTCACCACCTGATGCAGGTTGCACCACCAGCGCAACGGCTATGGTATGATGGAGAATAG
CAGCGTCTCGTCAGACGCCT

Downstream 100 bases:

>100_bases
CCAGATCACGTGATTACTGTCCATCACCCTCATCTTCGGGTGAGGTGATCAGACCGCTGTACAGAGATTGTAACAATGCC
CGCAACTGTTTCACTTCGTG

Product: glycosyl transferase family 2 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MLNLGSYPIAMIKPLISVLLPIRNAAATLPVCLQSLARQTFTNYEVLAIDDGSSDESPMIIAAAAARDARIVPIIAGRIG
LPAALNLGLTLARAPIIARMDADDAMHPTRLERQYHALQVNPDLALIASRVVAFPARAIRAGLREYLRWQNQVLTSEQIA
AEIYVEAPFVHPSVMFRRAVVQELGGYTDHSWPEDYELWLRMHAAGMRMHKLPGNLLAWREHPTRATRVDPRYARDAFDT
LRATYLARDPRLHSGRPLVYWGAGRVTRQRARRLIERGFPPFAWIDIDPAKIGQTIWGAPVHAPAWLNRQPRPFVLVYVT
NHGARDLIAGWLGEMGYQPGRDYLGVG

Sequences:

>Translated_347_residues
MLNLGSYPIAMIKPLISVLLPIRNAAATLPVCLQSLARQTFTNYEVLAIDDGSSDESPMIIAAAAARDARIVPIIAGRIG
LPAALNLGLTLARAPIIARMDADDAMHPTRLERQYHALQVNPDLALIASRVVAFPARAIRAGLREYLRWQNQVLTSEQIA
AEIYVEAPFVHPSVMFRRAVVQELGGYTDHSWPEDYELWLRMHAAGMRMHKLPGNLLAWREHPTRATRVDPRYARDAFDT
LRATYLARDPRLHSGRPLVYWGAGRVTRQRARRLIERGFPPFAWIDIDPAKIGQTIWGAPVHAPAWLNRQPRPFVLVYVT
NHGARDLIAGWLGEMGYQPGRDYLGVG
>Mature_347_residues
MLNLGSYPIAMIKPLISVLLPIRNAAATLPVCLQSLARQTFTNYEVLAIDDGSSDESPMIIAAAAARDARIVPIIAGRIG
LPAALNLGLTLARAPIIARMDADDAMHPTRLERQYHALQVNPDLALIASRVVAFPARAIRAGLREYLRWQNQVLTSEQIA
AEIYVEAPFVHPSVMFRRAVVQELGGYTDHSWPEDYELWLRMHAAGMRMHKLPGNLLAWREHPTRATRVDPRYARDAFDT
LRATYLARDPRLHSGRPLVYWGAGRVTRQRARRLIERGFPPFAWIDIDPAKIGQTIWGAPVHAPAWLNRQPRPFVLVYVT
NHGARDLIAGWLGEMGYQPGRDYLGVG

Specific function: Involved in the biosynthesis of amylovoran which functions as a virulence factor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI57770468, Length=361, Percent_Identity=25.7617728531856, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1790044, Length=97, Percent_Identity=34.020618556701, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38848; Mature: 38848

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLGSYPIAMIKPLISVLLPIRNAAATLPVCLQSLARQTFTNYEVLAIDDGSSDESPMI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEE
IAAAAARDARIVPIIAGRIGLPAALNLGLTLARAPIIARMDADDAMHPTRLERQYHALQV
EEEECCCCCEEEEEEECCCCCCHHHHCCCHHHHCCEEEEECCCCCCCCHHHHHHHEEEEE
NPDLALIASRVVAFPARAIRAGLREYLRWQNQVLTSEQIAAEIYVEAPFVHPSVMFRRAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHH
VQELGGYTDHSWPEDYELWLRMHAAGMRMHKLPGNLLAWREHPTRATRVDPRYARDAFDT
HHHHCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHH
LRATYLARDPRLHSGRPLVYWGAGRVTRQRARRLIERGFPPFAWIDIDPAKIGQTIWGAP
HHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCHHHHCHHHCCCC
VHAPAWLNRQPRPFVLVYVTNHGARDLIAGWLGEMGYQPGRDYLGVG
CCCCHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLNLGSYPIAMIKPLISVLLPIRNAAATLPVCLQSLARQTFTNYEVLAIDDGSSDESPMI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEE
IAAAAARDARIVPIIAGRIGLPAALNLGLTLARAPIIARMDADDAMHPTRLERQYHALQV
EEEECCCCCEEEEEEECCCCCCHHHHCCCHHHHCCEEEEECCCCCCCCHHHHHHHEEEEE
NPDLALIASRVVAFPARAIRAGLREYLRWQNQVLTSEQIAAEIYVEAPFVHPSVMFRRAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHH
VQELGGYTDHSWPEDYELWLRMHAAGMRMHKLPGNLLAWREHPTRATRVDPRYARDAFDT
HHHHCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHH
LRATYLARDPRLHSGRPLVYWGAGRVTRQRARRLIERGFPPFAWIDIDPAKIGQTIWGAP
HHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCHHHHCHHHCCCC
VHAPAWLNRQPRPFVLVYVTNHGARDLIAGWLGEMGYQPGRDYLGVG
CCCCHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7596293 [H]