| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525191
Identifier: 222525191
GI number: 222525191
Start: 2450167
End: 2451141
Strand: Direct
Name: 222525191
Synonym: Chy400_1931
Alternate gene names: NA
Gene position: 2450167-2451141 (Clockwise)
Preceding gene: 222525190
Following gene: 222525192
Centisome position: 46.5
GC content: 55.28
Gene sequence:
>975_bases ATGACCATCATTGAATTGTTGCAAGTCAACCTGCTGTCGCCGATGGTACTCGCCTTTGCGCTCGGTATCATCGCCACGCT GGTACGCAGTGATCTGAAACTACCCGATGAGTTGTACACGACGCTTTCCATCTATCTCCTGCTGGCAATTGGGCTGAAAG GTGGCGTGGCATTGGCCGAAACCAGTCTGGCCGTCTTTTGGGCACCGGCGCTGGCAACGCTATTCCTCGGCCTGATTATT CCAGTGTTTGCCTATAGCGTGGCCCGCAAGATTGGCAAAATGACCATTGCTGACGCAGCAGCACTTGCTGCTCACTACGG CTCGGTGTCGGCTGTGACGTTCGCTGCGGCACAGACCTTTCTTGACGCTGTAGGTATTCGTTATGAGGGCTTTATGCCGG CGCTGGTTGCGATTTTAGAGGTGCCGGCGATTGTGATTGCCCTGTTTATTGCTCAGGTGGCCGGTGGGCCGCAGGGGGGA GATTGGCGTGAGGCACTCCGTGAGTTGATCACCAGCAAGAGTATTTTGCTGCTCGTTGGTGGCATGATCATAGGTTGGTT GACCGGCCCTCGCGGCGGGAAAGAGGTTGCCCCGTTGTTTGTGGATTTATTTAAGGGTGCCTTGACCTTCTTTCTACTTG AACTGGGCATGGTGGCGGCCAGACGATTCCGGGATTTGCCCAGTGCTGGCCTGTTCCTGTTAGGATTTGGTATCATCATG CCAATACTCAACGGTCTGCTCGGAGTCTGGTTTGGCAGTCTTGCCGGTCTATCAGTGGGGGGCAGTACTATTTTGGGTGT CCTGGCGGCCAGCGCTTCGTATATCGCCGCACCGGCCGCAGTGCGTATTGCATTGCCCCAGGCCAATCCTGGATTCTACC TGACGGCGTCACTCGGGATTACGTTCCCGTTTAATCTGGCAATTGGGCTTCCACTCTACTACACGCTGGCGTTGTGGATT GTTGGTGGGCAATGA
Upstream 100 bases:
>100_bases CGACCGATGCCTCATATTGTAGCATTACTCGCCATGTTACGCGAGATGGTACGATAACGGAGATAGGTTGAGCAGACTTG AAATCGATGTAAGGAGTCTT
Downstream 100 bases:
>100_bases TCTGGAAAGGTAACGCCATGGAATTGACAACCGTCAAGCTGGTTACCATTATTGCCGAGGCCGTGCTGGAGGATCGTCTG TTGCACGATCTACGTCATCT
Product: hypothetical protein
Products: NA
Alternate protein names: Sodium-Dependent Bicarbonate Transporter; Sodium Bicarbonate Cotransporter; Conserved Domain Protein; SBT Type Permease Sodium-Bicarbonate; Membrane Permease; Sodium Dependent Bicarbonate Transporter; Permease-Like Protein; Domain Transmembrane Protein
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTIIELLQVNLLSPMVLAFALGIIATLVRSDLKLPDELYTTLSIYLLLAIGLKGGVALAETSLAVFWAPALATLFLGLII PVFAYSVARKIGKMTIADAAALAAHYGSVSAVTFAAAQTFLDAVGIRYEGFMPALVAILEVPAIVIALFIAQVAGGPQGG DWREALRELITSKSILLLVGGMIIGWLTGPRGGKEVAPLFVDLFKGALTFFLLELGMVAARRFRDLPSAGLFLLGFGIIM PILNGLLGVWFGSLAGLSVGGSTILGVLAASASYIAAPAAVRIALPQANPGFYLTASLGITFPFNLAIGLPLYYTLALWI VGGQ
Sequences:
>Translated_324_residues MTIIELLQVNLLSPMVLAFALGIIATLVRSDLKLPDELYTTLSIYLLLAIGLKGGVALAETSLAVFWAPALATLFLGLII PVFAYSVARKIGKMTIADAAALAAHYGSVSAVTFAAAQTFLDAVGIRYEGFMPALVAILEVPAIVIALFIAQVAGGPQGG DWREALRELITSKSILLLVGGMIIGWLTGPRGGKEVAPLFVDLFKGALTFFLLELGMVAARRFRDLPSAGLFLLGFGIIM PILNGLLGVWFGSLAGLSVGGSTILGVLAASASYIAAPAAVRIALPQANPGFYLTASLGITFPFNLAIGLPLYYTLALWI VGGQ >Mature_323_residues TIIELLQVNLLSPMVLAFALGIIATLVRSDLKLPDELYTTLSIYLLLAIGLKGGVALAETSLAVFWAPALATLFLGLIIP VFAYSVARKIGKMTIADAAALAAHYGSVSAVTFAAAQTFLDAVGIRYEGFMPALVAILEVPAIVIALFIAQVAGGPQGGD WREALRELITSKSILLLVGGMIIGWLTGPRGGKEVAPLFVDLFKGALTFFLLELGMVAARRFRDLPSAGLFLLGFGIIMP ILNGLLGVWFGSLAGLSVGGSTILGVLAASASYIAAPAAVRIALPQANPGFYLTASLGITFPFNLAIGLPLYYTLALWIV GGQ
Specific function: Unknown
COG id: COG3329
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33851; Mature: 33720
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIIELLQVNLLSPMVLAFALGIIATLVRSDLKLPDELYTTLSIYLLLAIGLKGGVALAE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHH TSLAVFWAPALATLFLGLIIPVFAYSVARKIGKMTIADAAALAAHYGSVSAVTFAAAQTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LDAVGIRYEGFMPALVAILEVPAIVIALFIAQVAGGPQGGDWREALRELITSKSILLLVG HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHH GMIIGWLTGPRGGKEVAPLFVDLFKGALTFFLLELGMVAARRFRDLPSAGLFLLGFGIIM HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH PILNGLLGVWFGSLAGLSVGGSTILGVLAASASYIAAPAAVRIALPQANPGFYLTASLGI HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCC TFPFNLAIGLPLYYTLALWIVGGQ EECHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TIIELLQVNLLSPMVLAFALGIIATLVRSDLKLPDELYTTLSIYLLLAIGLKGGVALAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHH TSLAVFWAPALATLFLGLIIPVFAYSVARKIGKMTIADAAALAAHYGSVSAVTFAAAQTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LDAVGIRYEGFMPALVAILEVPAIVIALFIAQVAGGPQGGDWREALRELITSKSILLLVG HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHH GMIIGWLTGPRGGKEVAPLFVDLFKGALTFFLLELGMVAARRFRDLPSAGLFLLGFGIIM HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH PILNGLLGVWFGSLAGLSVGGSTILGVLAASASYIAAPAAVRIALPQANPGFYLTASLGI HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCC TFPFNLAIGLPLYYTLALWIVGGQ EECHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA