| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is kch [C]
Identifier: 222525159
GI number: 222525159
Start: 2400032
End: 2401729
Strand: Direct
Name: kch [C]
Synonym: Chy400_1897
Alternate gene names: 222525159
Gene position: 2400032-2401729 (Clockwise)
Preceding gene: 222525158
Following gene: 222525162
Centisome position: 45.55
GC content: 58.36
Gene sequence:
>1698_bases ATGGCTCAGGATGTACGACTGACACGGTTACGTCGTCGTAGATTTGCGCTCTGGCGCCTGATAGTTGCGAATCTGCTTGA CGATCTGCGCGTGCTGCGGGAAGCCTGGTTTCCCCTCACAGCGCTTGCACTGGTGCTGACCAGCGGGGTGTTGTACCTGC GCTGGTTTTATTTGCCACCTGTCTGTGGCTGTAGCCCTGATCTTGAAGTTGCCCTCTTTGAAACGCTGAAGCTGCTCATT TTTCAAACCGACCTCGACCTGCCGACCGATCCCGCCGGTCGCGTGCTCTTCTTCCTCATTCCACTCCTTGGTCTGTTCTT CCTGTTGCAAAGTGCGGTTGATATAGGGCGTCTGCTGGTTGACAAACGCGCACGTCCCGAGCGATGGCAGGAAGCGTTAG CTGCAACCTACCGCCGACACATGATCGTCTGTGGTCTGGGCCGGGTGGGGTATCGGGCTGTGCTGCAATTGCTTGATTGC CGACGTGAGGTGGTCGCGATTGAGCCTGATCCGGGCTGTGAATTTTTGCCGATCCTGTACCAGTTGGGTGTGCCGGTCGT GCGTGGCGATGCCCGCGATCCGGCAGTACTGGTGAGGGCAGGTCTGCGCCGTGCCCAGGGGTTAATTGCCACCATTGATG ATGACCTGAAAAATCTGGAGATCGCACTGGCAGCCCGCCGTATTCGGCCTGAATTGCCGACGGTGCAGCGTATCTTCAGT CGCGCCCTTGATGCGCGCATCGAACGCTCGTTTGGCCGGAATTCAGCCTTTAGCCCGGCAGCCCTGGCTGCGCCTACATT TGCCGCTGCCCTCTTGAGTTCCAATGTCCGTTATGTGCTTGATCTAACGGCGGGACTCTTGGGGATAGCCTTCGTCAATG TGAGTGATGATAGCCCACTGATCGGACCGGTCGCCGATCTGGAAACACGGTTTGGTGTCCGCCGCTTGCCCGGTCCTAAT GCCCATCTCCCAATTCTGCCGAGCGAAGAGATTGCGCTGATTGGCCCACTCCCTGCTCTTGAGGCAGTGCAGTGGGCTAA TCGACCTCATCCCACTCGGCGCAATGGTGGCCTGATCGTTTGTGGGTTGGGGAAGGTTGGTACCCAGGTCGTGCGACTAC TCAGTCGGCGCGAACCACGTCCTCCGCTCACCGTCATCTGCACCGTCGAGACACCACTGCGCTACGTTGAAGCCTTGACT GCCCAGGGCATACGGGTCTTGCGTGGTGATGCTCGTGATCCGGTTCTGCTTCGCGAAGCAGGAATCGAAGAGGCAGCGGC ACTGGCCGCGCTCTACAGCGATGATCTGCTCAATTTGCAGATCGGGCTGGCCGTGCGCAGCATGTATCCTGATGTGCATC TGGTGCTGCGCGTCTTCAGTGATGTGTTGGCCGACCGCCTCGTTGATCTGTTTGGAATCCATACTGCATTCAGCACCTCG GCTCTTGCCGCTCCCAGCCTGGTTGCGGCTGCCCTGCTCCCCGACGTCGAGGCGGCATTTGACGTTGGCGATCACCTGTT GGTCGTTCGCCGTCAGATCATGACTGATGGTCGGGTCGGCCAGACGGTAGCCGAATTACGCACTGCCGGTCAGTTACCAC TCAGTCTGCGCCGCGGTGAACAGTATCAATGGTTGCCACCAGATGAAACGGTGATTGAGGCGAACGACGAAGTTGAATTG CTTACGTTCCTGACGTAA
Upstream 100 bases:
>100_bases GTGGCGATGGCCCGTCATAGTATCGACAGTGGCCGAGCGCTGGAGCGGTTGAACCAGATGATTGCTGTCAGTCGTGGCGA ATGAAGGCGACGGTCGTGGT
Downstream 100 bases:
>100_bases ACACCCGTCCACTGCTGTCCTTAGCGGGTAAAGACAATCCGCCCGCCAACCATCGTCAACATCACCCGCGTTGTCGCAAT CTGATCAGGTGGGATCGTCG
Product: TrkA-N domain-containing protein
Products: K (I) [Cytoplasm] [C]
Alternate protein names: TrkA-N Domain-Containing Protein; TrkA-N Domain Family; TrkA-N Domain Protein; TrkA-C Domain-Containing Protein; Regulator Of K+ Conductance; Potassium Channel; Potassium Channel Protein; Trka-N Domain Protein; TrkA Family Protein; TrkA-N
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MAQDVRLTRLRRRRFALWRLIVANLLDDLRVLREAWFPLTALALVLTSGVLYLRWFYLPPVCGCSPDLEVALFETLKLLI FQTDLDLPTDPAGRVLFFLIPLLGLFFLLQSAVDIGRLLVDKRARPERWQEALAATYRRHMIVCGLGRVGYRAVLQLLDC RREVVAIEPDPGCEFLPILYQLGVPVVRGDARDPAVLVRAGLRRAQGLIATIDDDLKNLEIALAARRIRPELPTVQRIFS RALDARIERSFGRNSAFSPAALAAPTFAAALLSSNVRYVLDLTAGLLGIAFVNVSDDSPLIGPVADLETRFGVRRLPGPN AHLPILPSEEIALIGPLPALEAVQWANRPHPTRRNGGLIVCGLGKVGTQVVRLLSRREPRPPLTVICTVETPLRYVEALT AQGIRVLRGDARDPVLLREAGIEEAAALAALYSDDLLNLQIGLAVRSMYPDVHLVLRVFSDVLADRLVDLFGIHTAFSTS ALAAPSLVAAALLPDVEAAFDVGDHLLVVRRQIMTDGRVGQTVAELRTAGQLPLSLRRGEQYQWLPPDETVIEANDEVEL LTFLT
Sequences:
>Translated_565_residues MAQDVRLTRLRRRRFALWRLIVANLLDDLRVLREAWFPLTALALVLTSGVLYLRWFYLPPVCGCSPDLEVALFETLKLLI FQTDLDLPTDPAGRVLFFLIPLLGLFFLLQSAVDIGRLLVDKRARPERWQEALAATYRRHMIVCGLGRVGYRAVLQLLDC RREVVAIEPDPGCEFLPILYQLGVPVVRGDARDPAVLVRAGLRRAQGLIATIDDDLKNLEIALAARRIRPELPTVQRIFS RALDARIERSFGRNSAFSPAALAAPTFAAALLSSNVRYVLDLTAGLLGIAFVNVSDDSPLIGPVADLETRFGVRRLPGPN AHLPILPSEEIALIGPLPALEAVQWANRPHPTRRNGGLIVCGLGKVGTQVVRLLSRREPRPPLTVICTVETPLRYVEALT AQGIRVLRGDARDPVLLREAGIEEAAALAALYSDDLLNLQIGLAVRSMYPDVHLVLRVFSDVLADRLVDLFGIHTAFSTS ALAAPSLVAAALLPDVEAAFDVGDHLLVVRRQIMTDGRVGQTVAELRTAGQLPLSLRRGEQYQWLPPDETVIEANDEVEL LTFLT >Mature_564_residues AQDVRLTRLRRRRFALWRLIVANLLDDLRVLREAWFPLTALALVLTSGVLYLRWFYLPPVCGCSPDLEVALFETLKLLIF QTDLDLPTDPAGRVLFFLIPLLGLFFLLQSAVDIGRLLVDKRARPERWQEALAATYRRHMIVCGLGRVGYRAVLQLLDCR REVVAIEPDPGCEFLPILYQLGVPVVRGDARDPAVLVRAGLRRAQGLIATIDDDLKNLEIALAARRIRPELPTVQRIFSR ALDARIERSFGRNSAFSPAALAAPTFAAALLSSNVRYVLDLTAGLLGIAFVNVSDDSPLIGPVADLETRFGVRRLPGPNA HLPILPSEEIALIGPLPALEAVQWANRPHPTRRNGGLIVCGLGKVGTQVVRLLSRREPRPPLTVICTVETPLRYVEALTA QGIRVLRGDARDPVLLREAGIEEAAALAALYSDDLLNLQIGLAVRSMYPDVHLVLRVFSDVLADRLVDLFGIHTAFSTSA LAAPSLVAAALLPDVEAAFDVGDHLLVVRRQIMTDGRVGQTVAELRTAGQLPLSLRRGEQYQWLPPDETVIEANDEVELL TFLT
Specific function: May Play A Role In The Defense Against Osmotic Shock. [C]
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62299; Mature: 62167
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQDVRLTRLRRRRFALWRLIVANLLDDLRVLREAWFPLTALALVLTSGVLYLRWFYLPP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCC VCGCSPDLEVALFETLKLLIFQTDLDLPTDPAGRVLFFLIPLLGLFFLLQSAVDIGRLLV CCCCCCCCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKRARPERWQEALAATYRRHMIVCGLGRVGYRAVLQLLDCRREVVAIEPDPGCEFLPILY HCCCCHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH QLGVPVVRGDARDPAVLVRAGLRRAQGLIATIDDDLKNLEIALAARRIRPELPTVQRIFS HCCCCEEECCCCCHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHH RALDARIERSFGRNSAFSPAALAAPTFAAALLSSNVRYVLDLTAGLLGIAFVNVSDDSPL HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHEEEEECCCCCC IGPVADLETRFGVRRLPGPNAHLPILPSEEIALIGPLPALEAVQWANRPHPTRRNGGLIV CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCEEE CGLGKVGTQVVRLLSRREPRPPLTVICTVETPLRYVEALTAQGIRVLRGDARDPVLLREA EECCHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCHHEECCCCCCCEEHHHC GIEEAAALAALYSDDLLNLQIGLAVRSMYPDVHLVLRVFSDVLADRLVDLFGIHTAFSTS CHHHHHHHHHHHHCCHHEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAAPSLVAAALLPDVEAAFDVGDHLLVVRRQIMTDGRVGQTVAELRTAGQLPLSLRRGE HHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHCCC QYQWLPPDETVIEANDEVELLTFLT CCCCCCCCCCEEECCCCEEEEEECC >Mature Secondary Structure AQDVRLTRLRRRRFALWRLIVANLLDDLRVLREAWFPLTALALVLTSGVLYLRWFYLPP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCC VCGCSPDLEVALFETLKLLIFQTDLDLPTDPAGRVLFFLIPLLGLFFLLQSAVDIGRLLV CCCCCCCCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKRARPERWQEALAATYRRHMIVCGLGRVGYRAVLQLLDCRREVVAIEPDPGCEFLPILY HCCCCHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH QLGVPVVRGDARDPAVLVRAGLRRAQGLIATIDDDLKNLEIALAARRIRPELPTVQRIFS HCCCCEEECCCCCHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHH RALDARIERSFGRNSAFSPAALAAPTFAAALLSSNVRYVLDLTAGLLGIAFVNVSDDSPL HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHEEEEECCCCCC IGPVADLETRFGVRRLPGPNAHLPILPSEEIALIGPLPALEAVQWANRPHPTRRNGGLIV CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCEEE CGLGKVGTQVVRLLSRREPRPPLTVICTVETPLRYVEALTAQGIRVLRGDARDPVLLREA EECCHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCHHEECCCCCCCEEHHHC GIEEAAALAALYSDDLLNLQIGLAVRSMYPDVHLVLRVFSDVLADRLVDLFGIHTAFSTS CHHHHHHHHHHHHCCHHEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAAPSLVAAALLPDVEAAFDVGDHLLVVRRQIMTDGRVGQTVAELRTAGQLPLSLRRGE HHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHCCC QYQWLPPDETVIEANDEVELLTFLT CCCCCCCCCCEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA