Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is kch [C]

Identifier: 222525159

GI number: 222525159

Start: 2400032

End: 2401729

Strand: Direct

Name: kch [C]

Synonym: Chy400_1897

Alternate gene names: 222525159

Gene position: 2400032-2401729 (Clockwise)

Preceding gene: 222525158

Following gene: 222525162

Centisome position: 45.55

GC content: 58.36

Gene sequence:

>1698_bases
ATGGCTCAGGATGTACGACTGACACGGTTACGTCGTCGTAGATTTGCGCTCTGGCGCCTGATAGTTGCGAATCTGCTTGA
CGATCTGCGCGTGCTGCGGGAAGCCTGGTTTCCCCTCACAGCGCTTGCACTGGTGCTGACCAGCGGGGTGTTGTACCTGC
GCTGGTTTTATTTGCCACCTGTCTGTGGCTGTAGCCCTGATCTTGAAGTTGCCCTCTTTGAAACGCTGAAGCTGCTCATT
TTTCAAACCGACCTCGACCTGCCGACCGATCCCGCCGGTCGCGTGCTCTTCTTCCTCATTCCACTCCTTGGTCTGTTCTT
CCTGTTGCAAAGTGCGGTTGATATAGGGCGTCTGCTGGTTGACAAACGCGCACGTCCCGAGCGATGGCAGGAAGCGTTAG
CTGCAACCTACCGCCGACACATGATCGTCTGTGGTCTGGGCCGGGTGGGGTATCGGGCTGTGCTGCAATTGCTTGATTGC
CGACGTGAGGTGGTCGCGATTGAGCCTGATCCGGGCTGTGAATTTTTGCCGATCCTGTACCAGTTGGGTGTGCCGGTCGT
GCGTGGCGATGCCCGCGATCCGGCAGTACTGGTGAGGGCAGGTCTGCGCCGTGCCCAGGGGTTAATTGCCACCATTGATG
ATGACCTGAAAAATCTGGAGATCGCACTGGCAGCCCGCCGTATTCGGCCTGAATTGCCGACGGTGCAGCGTATCTTCAGT
CGCGCCCTTGATGCGCGCATCGAACGCTCGTTTGGCCGGAATTCAGCCTTTAGCCCGGCAGCCCTGGCTGCGCCTACATT
TGCCGCTGCCCTCTTGAGTTCCAATGTCCGTTATGTGCTTGATCTAACGGCGGGACTCTTGGGGATAGCCTTCGTCAATG
TGAGTGATGATAGCCCACTGATCGGACCGGTCGCCGATCTGGAAACACGGTTTGGTGTCCGCCGCTTGCCCGGTCCTAAT
GCCCATCTCCCAATTCTGCCGAGCGAAGAGATTGCGCTGATTGGCCCACTCCCTGCTCTTGAGGCAGTGCAGTGGGCTAA
TCGACCTCATCCCACTCGGCGCAATGGTGGCCTGATCGTTTGTGGGTTGGGGAAGGTTGGTACCCAGGTCGTGCGACTAC
TCAGTCGGCGCGAACCACGTCCTCCGCTCACCGTCATCTGCACCGTCGAGACACCACTGCGCTACGTTGAAGCCTTGACT
GCCCAGGGCATACGGGTCTTGCGTGGTGATGCTCGTGATCCGGTTCTGCTTCGCGAAGCAGGAATCGAAGAGGCAGCGGC
ACTGGCCGCGCTCTACAGCGATGATCTGCTCAATTTGCAGATCGGGCTGGCCGTGCGCAGCATGTATCCTGATGTGCATC
TGGTGCTGCGCGTCTTCAGTGATGTGTTGGCCGACCGCCTCGTTGATCTGTTTGGAATCCATACTGCATTCAGCACCTCG
GCTCTTGCCGCTCCCAGCCTGGTTGCGGCTGCCCTGCTCCCCGACGTCGAGGCGGCATTTGACGTTGGCGATCACCTGTT
GGTCGTTCGCCGTCAGATCATGACTGATGGTCGGGTCGGCCAGACGGTAGCCGAATTACGCACTGCCGGTCAGTTACCAC
TCAGTCTGCGCCGCGGTGAACAGTATCAATGGTTGCCACCAGATGAAACGGTGATTGAGGCGAACGACGAAGTTGAATTG
CTTACGTTCCTGACGTAA

Upstream 100 bases:

>100_bases
GTGGCGATGGCCCGTCATAGTATCGACAGTGGCCGAGCGCTGGAGCGGTTGAACCAGATGATTGCTGTCAGTCGTGGCGA
ATGAAGGCGACGGTCGTGGT

Downstream 100 bases:

>100_bases
ACACCCGTCCACTGCTGTCCTTAGCGGGTAAAGACAATCCGCCCGCCAACCATCGTCAACATCACCCGCGTTGTCGCAAT
CTGATCAGGTGGGATCGTCG

Product: TrkA-N domain-containing protein

Products: K (I) [Cytoplasm] [C]

Alternate protein names: TrkA-N Domain-Containing Protein; TrkA-N Domain Family; TrkA-N Domain Protein; TrkA-C Domain-Containing Protein; Regulator Of K+ Conductance; Potassium Channel; Potassium Channel Protein; Trka-N Domain Protein; TrkA Family Protein; TrkA-N

Number of amino acids: Translated: 565; Mature: 564

Protein sequence:

>565_residues
MAQDVRLTRLRRRRFALWRLIVANLLDDLRVLREAWFPLTALALVLTSGVLYLRWFYLPPVCGCSPDLEVALFETLKLLI
FQTDLDLPTDPAGRVLFFLIPLLGLFFLLQSAVDIGRLLVDKRARPERWQEALAATYRRHMIVCGLGRVGYRAVLQLLDC
RREVVAIEPDPGCEFLPILYQLGVPVVRGDARDPAVLVRAGLRRAQGLIATIDDDLKNLEIALAARRIRPELPTVQRIFS
RALDARIERSFGRNSAFSPAALAAPTFAAALLSSNVRYVLDLTAGLLGIAFVNVSDDSPLIGPVADLETRFGVRRLPGPN
AHLPILPSEEIALIGPLPALEAVQWANRPHPTRRNGGLIVCGLGKVGTQVVRLLSRREPRPPLTVICTVETPLRYVEALT
AQGIRVLRGDARDPVLLREAGIEEAAALAALYSDDLLNLQIGLAVRSMYPDVHLVLRVFSDVLADRLVDLFGIHTAFSTS
ALAAPSLVAAALLPDVEAAFDVGDHLLVVRRQIMTDGRVGQTVAELRTAGQLPLSLRRGEQYQWLPPDETVIEANDEVEL
LTFLT

Sequences:

>Translated_565_residues
MAQDVRLTRLRRRRFALWRLIVANLLDDLRVLREAWFPLTALALVLTSGVLYLRWFYLPPVCGCSPDLEVALFETLKLLI
FQTDLDLPTDPAGRVLFFLIPLLGLFFLLQSAVDIGRLLVDKRARPERWQEALAATYRRHMIVCGLGRVGYRAVLQLLDC
RREVVAIEPDPGCEFLPILYQLGVPVVRGDARDPAVLVRAGLRRAQGLIATIDDDLKNLEIALAARRIRPELPTVQRIFS
RALDARIERSFGRNSAFSPAALAAPTFAAALLSSNVRYVLDLTAGLLGIAFVNVSDDSPLIGPVADLETRFGVRRLPGPN
AHLPILPSEEIALIGPLPALEAVQWANRPHPTRRNGGLIVCGLGKVGTQVVRLLSRREPRPPLTVICTVETPLRYVEALT
AQGIRVLRGDARDPVLLREAGIEEAAALAALYSDDLLNLQIGLAVRSMYPDVHLVLRVFSDVLADRLVDLFGIHTAFSTS
ALAAPSLVAAALLPDVEAAFDVGDHLLVVRRQIMTDGRVGQTVAELRTAGQLPLSLRRGEQYQWLPPDETVIEANDEVEL
LTFLT
>Mature_564_residues
AQDVRLTRLRRRRFALWRLIVANLLDDLRVLREAWFPLTALALVLTSGVLYLRWFYLPPVCGCSPDLEVALFETLKLLIF
QTDLDLPTDPAGRVLFFLIPLLGLFFLLQSAVDIGRLLVDKRARPERWQEALAATYRRHMIVCGLGRVGYRAVLQLLDCR
REVVAIEPDPGCEFLPILYQLGVPVVRGDARDPAVLVRAGLRRAQGLIATIDDDLKNLEIALAARRIRPELPTVQRIFSR
ALDARIERSFGRNSAFSPAALAAPTFAAALLSSNVRYVLDLTAGLLGIAFVNVSDDSPLIGPVADLETRFGVRRLPGPNA
HLPILPSEEIALIGPLPALEAVQWANRPHPTRRNGGLIVCGLGKVGTQVVRLLSRREPRPPLTVICTVETPLRYVEALTA
QGIRVLRGDARDPVLLREAGIEEAAALAALYSDDLLNLQIGLAVRSMYPDVHLVLRVFSDVLADRLVDLFGIHTAFSTSA
LAAPSLVAAALLPDVEAAFDVGDHLLVVRRQIMTDGRVGQTVAELRTAGQLPLSLRRGEQYQWLPPDETVIEANDEVELL
TFLT

Specific function: May Play A Role In The Defense Against Osmotic Shock. [C]

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62299; Mature: 62167

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQDVRLTRLRRRRFALWRLIVANLLDDLRVLREAWFPLTALALVLTSGVLYLRWFYLPP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCC
VCGCSPDLEVALFETLKLLIFQTDLDLPTDPAGRVLFFLIPLLGLFFLLQSAVDIGRLLV
CCCCCCCCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKRARPERWQEALAATYRRHMIVCGLGRVGYRAVLQLLDCRREVVAIEPDPGCEFLPILY
HCCCCHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH
QLGVPVVRGDARDPAVLVRAGLRRAQGLIATIDDDLKNLEIALAARRIRPELPTVQRIFS
HCCCCEEECCCCCHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHH
RALDARIERSFGRNSAFSPAALAAPTFAAALLSSNVRYVLDLTAGLLGIAFVNVSDDSPL
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHEEEEECCCCCC
IGPVADLETRFGVRRLPGPNAHLPILPSEEIALIGPLPALEAVQWANRPHPTRRNGGLIV
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCEEE
CGLGKVGTQVVRLLSRREPRPPLTVICTVETPLRYVEALTAQGIRVLRGDARDPVLLREA
EECCHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCHHEECCCCCCCEEHHHC
GIEEAAALAALYSDDLLNLQIGLAVRSMYPDVHLVLRVFSDVLADRLVDLFGIHTAFSTS
CHHHHHHHHHHHHCCHHEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAAPSLVAAALLPDVEAAFDVGDHLLVVRRQIMTDGRVGQTVAELRTAGQLPLSLRRGE
HHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHCCC
QYQWLPPDETVIEANDEVELLTFLT
CCCCCCCCCCEEECCCCEEEEEECC
>Mature Secondary Structure 
AQDVRLTRLRRRRFALWRLIVANLLDDLRVLREAWFPLTALALVLTSGVLYLRWFYLPP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCC
VCGCSPDLEVALFETLKLLIFQTDLDLPTDPAGRVLFFLIPLLGLFFLLQSAVDIGRLLV
CCCCCCCCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKRARPERWQEALAATYRRHMIVCGLGRVGYRAVLQLLDCRREVVAIEPDPGCEFLPILY
HCCCCHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH
QLGVPVVRGDARDPAVLVRAGLRRAQGLIATIDDDLKNLEIALAARRIRPELPTVQRIFS
HCCCCEEECCCCCHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHH
RALDARIERSFGRNSAFSPAALAAPTFAAALLSSNVRYVLDLTAGLLGIAFVNVSDDSPL
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHEEEEECCCCCC
IGPVADLETRFGVRRLPGPNAHLPILPSEEIALIGPLPALEAVQWANRPHPTRRNGGLIV
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCEEE
CGLGKVGTQVVRLLSRREPRPPLTVICTVETPLRYVEALTAQGIRVLRGDARDPVLLREA
EECCHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCHHEECCCCCCCEEHHHC
GIEEAAALAALYSDDLLNLQIGLAVRSMYPDVHLVLRVFSDVLADRLVDLFGIHTAFSTS
CHHHHHHHHHHHHCCHHEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAAPSLVAAALLPDVEAAFDVGDHLLVVRRQIMTDGRVGQTVAELRTAGQLPLSLRRGE
HHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHCCC
QYQWLPPDETVIEANDEVELLTFLT
CCCCCCCCCCEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: K (I) [Periplasm] [C]

Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA