| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525146
Identifier: 222525146
GI number: 222525146
Start: 2380873
End: 2382657
Strand: Direct
Name: 222525146
Synonym: Chy400_1884
Alternate gene names: NA
Gene position: 2380873-2382657 (Clockwise)
Preceding gene: 222525145
Following gene: 222525147
Centisome position: 45.19
GC content: 52.89
Gene sequence:
>1785_bases ATGAGTGATCTGCTGATCATCAGCCATGATGTCGTTGGTCAACGAATGGCTGGACCTGGCATTCGGATGTGGGAGCTGGC ACGAACGTTGGCCAGACAGATTCCGGTGACCTTGATAGCACCTCGCCCTATTGATTTGCCGTTAGCGCCGGGGATCACGT ATGGACATTACACCTGGGGTGACAAAACCTCGCTCACACCGTATCTGAACGGAGCGACCACAGTACTGGCAAATGGTTTC GTTGCCTCTGTTCATCCCGAACTGCTTACGTTTCATGGCCGATTGATAGTTGATCTTTACGATCCTATCGTCTTTGAAAA TCTCGAACTGTTTCGCCAGCGACCGATTGCCGAACGGGAAGCACAGACACAACGTGACATAACGTTATTGCGAGGGCTGC TCCTGCGTGGCGACCATTTTCTCTGCGCTACCGAACGGCAGCGCGATCTGTACATCGGCGGATTACTGGCGCTTGGCCGA TTGTCACCTGCGATGGTTGATAGCGATCCGCTGCTACGTGACCTGATCGACGTTGTGCCATTCGGGGTGAGCGATGATCC GCCGCAGGCAAGTGGCCAACCGGCACTACGTGGTGTCCTTGATGACCTGAACGCCGATCATCAGATCATTCTCTGGAGCA GTGGCCTCTGGGACTGGCTCGATCCGCTGACAGTAGTACGGGCGATGCCGGATGTGCTGCCTGTTGTACCAAAAGCCCGC CTGGTCTTCCTGGCCGGACGACATCCAGGCCAGGTTCCTGAAATGACAACCCTCCAGCAAACTCGCCAACTGGCTACCGA CCTGGGATTACTCGGCAACGGCATTCACTTCTACAACGAATGGATACCCTACGCACGACGCGCCGACTTTCTGCTGGAAG CGGCGATTATGGTATCATTGCACCAGGAACATTTAGAGACACGCTATGCCGCTGTAAGGTCGCGTATTCTTGATCATTTC TGGGTAGGACGCCCCAGCATTGTCAGCGCCGGTGATGCTGCTGCCGAACTCATCAGGGAACATCAGGCCGGAGAGGTTGT TCCGATTGGTGACAGTCAGGCGGTCGCTGCCGCGCTTATTCGTTTACTAACCGATCAGCAGTACTGTGCACATCAGAGTG CTCAGGCCACAGCCCTTGGCCAGCGCTTGCGCTGGTCCCAGGTGGTAGCGCCGTTGTGGCGTATGGTATCATCTCCTATA AGGAAGACTGAATGCAGCACAACCGAGAAACGGCAATCAACCATGGATAATCTGCAAACCATTCTGCAAGAGCGCAATGC ATTAATCCACGAACTGGAAAAGTACTGGCAGGTCGCTCCAGATTCTTCCCAACCAGGCTCAATGCTCGGGCGCGTAAAGC AATGGCTGCAACGACGAATAACTGGTTCACTACACGCCGACCTGTGTCGAATTGCGGATCAGCAACGGGCGTTTAATGCA GCATTGATCAATCTGGTATATCGTTTATCCAGTGCTTTCGATGAACAGGCGCGACGAACGGAAGAGCAACTGCATACGCT CCGCTATGAGACAACGCTCTATCAGCAGCATGTAGCAAATCATCTGGCGTCGCTCACCCAACAACTTGCCGAGATGAAGC CGTTGCTGGAAGTAGTCAGACAGGAGCAGATTACACTCAATACTGAATTACAAAAAGCTCGCGACACATTACCACCACTC CATCAACACATTATTGATCTCGAAACACGTATCCTTGATTTGGATGAAGTGCTCTCACAAGTGGCACAGCGATTAAGCGA TCTATCTCTCTCTTTATCAAAATGA
Upstream 100 bases:
>100_bases TTGATGTTCACGACCGCATGTATCCTCTGGTCATCCATAGTGATGGTCTGAGCCAACGGTACGGCATGGTGTTCTGCGAA GGGAACTGGAGCTGGCACGG
Downstream 100 bases:
>100_bases AAGCAAGCGTTGTTATTCCATTGTTGCAGGGTGGGTTATACATTCGCGACTGCCTGCAATCATTGCAACAACAGTCAGAA CAACCGGCCATTATTGTCGT
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyltransferase; Diverged Glycosyltransferase Domain-Containing Protein; Glycosyl Transferase Family Protein; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 594; Mature: 593
Protein sequence:
>594_residues MSDLLIISHDVVGQRMAGPGIRMWELARTLARQIPVTLIAPRPIDLPLAPGITYGHYTWGDKTSLTPYLNGATTVLANGF VASVHPELLTFHGRLIVDLYDPIVFENLELFRQRPIAEREAQTQRDITLLRGLLLRGDHFLCATERQRDLYIGGLLALGR LSPAMVDSDPLLRDLIDVVPFGVSDDPPQASGQPALRGVLDDLNADHQIILWSSGLWDWLDPLTVVRAMPDVLPVVPKAR LVFLAGRHPGQVPEMTTLQQTRQLATDLGLLGNGIHFYNEWIPYARRADFLLEAAIMVSLHQEHLETRYAAVRSRILDHF WVGRPSIVSAGDAAAELIREHQAGEVVPIGDSQAVAAALIRLLTDQQYCAHQSAQATALGQRLRWSQVVAPLWRMVSSPI RKTECSTTEKRQSTMDNLQTILQERNALIHELEKYWQVAPDSSQPGSMLGRVKQWLQRRITGSLHADLCRIADQQRAFNA ALINLVYRLSSAFDEQARRTEEQLHTLRYETTLYQQHVANHLASLTQQLAEMKPLLEVVRQEQITLNTELQKARDTLPPL HQHIIDLETRILDLDEVLSQVAQRLSDLSLSLSK
Sequences:
>Translated_594_residues MSDLLIISHDVVGQRMAGPGIRMWELARTLARQIPVTLIAPRPIDLPLAPGITYGHYTWGDKTSLTPYLNGATTVLANGF VASVHPELLTFHGRLIVDLYDPIVFENLELFRQRPIAEREAQTQRDITLLRGLLLRGDHFLCATERQRDLYIGGLLALGR LSPAMVDSDPLLRDLIDVVPFGVSDDPPQASGQPALRGVLDDLNADHQIILWSSGLWDWLDPLTVVRAMPDVLPVVPKAR LVFLAGRHPGQVPEMTTLQQTRQLATDLGLLGNGIHFYNEWIPYARRADFLLEAAIMVSLHQEHLETRYAAVRSRILDHF WVGRPSIVSAGDAAAELIREHQAGEVVPIGDSQAVAAALIRLLTDQQYCAHQSAQATALGQRLRWSQVVAPLWRMVSSPI RKTECSTTEKRQSTMDNLQTILQERNALIHELEKYWQVAPDSSQPGSMLGRVKQWLQRRITGSLHADLCRIADQQRAFNA ALINLVYRLSSAFDEQARRTEEQLHTLRYETTLYQQHVANHLASLTQQLAEMKPLLEVVRQEQITLNTELQKARDTLPPL HQHIIDLETRILDLDEVLSQVAQRLSDLSLSLSK >Mature_593_residues SDLLIISHDVVGQRMAGPGIRMWELARTLARQIPVTLIAPRPIDLPLAPGITYGHYTWGDKTSLTPYLNGATTVLANGFV ASVHPELLTFHGRLIVDLYDPIVFENLELFRQRPIAEREAQTQRDITLLRGLLLRGDHFLCATERQRDLYIGGLLALGRL SPAMVDSDPLLRDLIDVVPFGVSDDPPQASGQPALRGVLDDLNADHQIILWSSGLWDWLDPLTVVRAMPDVLPVVPKARL VFLAGRHPGQVPEMTTLQQTRQLATDLGLLGNGIHFYNEWIPYARRADFLLEAAIMVSLHQEHLETRYAAVRSRILDHFW VGRPSIVSAGDAAAELIREHQAGEVVPIGDSQAVAAALIRLLTDQQYCAHQSAQATALGQRLRWSQVVAPLWRMVSSPIR KTECSTTEKRQSTMDNLQTILQERNALIHELEKYWQVAPDSSQPGSMLGRVKQWLQRRITGSLHADLCRIADQQRAFNAA LINLVYRLSSAFDEQARRTEEQLHTLRYETTLYQQHVANHLASLTQQLAEMKPLLEVVRQEQITLNTELQKARDTLPPLH QHIIDLETRILDLDEVLSQVAQRLSDLSLSLSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66801; Mature: 66669
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLLIISHDVVGQRMAGPGIRMWELARTLARQIPVTLIAPRPIDLPLAPGITYGHYTWG CCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCC DKTSLTPYLNGATTVLANGFVASVHPELLTFHGRLIVDLYDPIVFENLELFRQRPIAERE CCCCCCCCCCCHHHHHHCCCHHHCCHHHHHHCCEEEEEHHHHHHHHHHHHHHHCCCHHHH AQTQRDITLLRGLLLRGDHFLCATERQRDLYIGGLLALGRLSPAMVDSDPLLRDLIDVVP HHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCHHCCCCHHHHHHHHHCC FGVSDDPPQASGQPALRGVLDDLNADHQIILWSSGLWDWLDPLTVVRAMPDVLPVVPKAR CCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCE LVFLAGRHPGQVPEMTTLQQTRQLATDLGLLGNGIHFYNEWIPYARRADFLLEAAIMVSL EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHH HQEHLETRYAAVRSRILDHFWVGRPSIVSAGDAAAELIREHQAGEVVPIGDSQAVAAALI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHH RLLTDQQYCAHQSAQATALGQRLRWSQVVAPLWRMVSSPIRKTECSTTEKRQSTMDNLQT HHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHH ILQERNALIHELEKYWQVAPDSSQPGSMLGRVKQWLQRRITGSLHADLCRIADQQRAFNA HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH ALINLVYRLSSAFDEQARRTEEQLHTLRYETTLYQQHVANHLASLTQQLAEMKPLLEVVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEQITLNTELQKARDTLPPLHQHIIDLETRILDLDEVLSQVAQRLSDLSLSLSK HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SDLLIISHDVVGQRMAGPGIRMWELARTLARQIPVTLIAPRPIDLPLAPGITYGHYTWG CCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCC DKTSLTPYLNGATTVLANGFVASVHPELLTFHGRLIVDLYDPIVFENLELFRQRPIAERE CCCCCCCCCCCHHHHHHCCCHHHCCHHHHHHCCEEEEEHHHHHHHHHHHHHHHCCCHHHH AQTQRDITLLRGLLLRGDHFLCATERQRDLYIGGLLALGRLSPAMVDSDPLLRDLIDVVP HHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCHHCCCCHHHHHHHHHCC FGVSDDPPQASGQPALRGVLDDLNADHQIILWSSGLWDWLDPLTVVRAMPDVLPVVPKAR CCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCE LVFLAGRHPGQVPEMTTLQQTRQLATDLGLLGNGIHFYNEWIPYARRADFLLEAAIMVSL EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHH HQEHLETRYAAVRSRILDHFWVGRPSIVSAGDAAAELIREHQAGEVVPIGDSQAVAAALI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHH RLLTDQQYCAHQSAQATALGQRLRWSQVVAPLWRMVSSPIRKTECSTTEKRQSTMDNLQT HHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHH ILQERNALIHELEKYWQVAPDSSQPGSMLGRVKQWLQRRITGSLHADLCRIADQQRAFNA HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH ALINLVYRLSSAFDEQARRTEEQLHTLRYETTLYQQHVANHLASLTQQLAEMKPLLEVVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEQITLNTELQKARDTLPPLHQHIIDLETRILDLDEVLSQVAQRLSDLSLSLSK HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA