| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525135
Identifier: 222525135
GI number: 222525135
Start: 2367113
End: 2368648
Strand: Direct
Name: 222525135
Synonym: Chy400_1873
Alternate gene names: NA
Gene position: 2367113-2368648 (Clockwise)
Preceding gene: 222525134
Following gene: 222525136
Centisome position: 44.93
GC content: 56.38
Gene sequence:
>1536_bases GTGGAGTACCAACCCGACGTAAAACGCATCACCGGTGAAGGTGGAGTGATTGCCCGTGTCGCAGAGCAGAGTCTGGGCGA ACACATCGGTCTGCAAGCGGGTGACATCATTGTGGCGATTGATGGTCAGCGGCTTCGCGATGTGATTGATTATCGCTTTG CGATTGCGGAAGAGCGCGTAACCCTGTTGATCCGCACCGCCACCGGTGATGAACGCGAAATAACGATTGATAAAGACCCC GACGATGACCTGGGTATTGAATTTACCGAACCGCTCTTTGATCGGTTGCGTACCTGTAATAATAAATGCCCCTTCTGTTT TCTCACCCAGATGCCGAAAGGCTTTCGCAAAACACTCTATCTGAAAGATGACGATTACCGGCTATCGTTCCTCTACGCGA ATTTTGTCACCTTTACCAATCTGACCGAAGCCGATTGGGAACGGATCGAGCGTCAGCGTCTGTCGCCGTTGCACATTAGC GTCCACGCCACCGATCCCTTCTGGCGGGCGATTATGCTGGGTAAGCGCGATGTGCCTGATGTTCGTGAGCAGATTCGCCG CCTGGGCAAGATGGGCATTCGCGTTCACACCCAGATTGTGGCCTGTCCCCAGGTCAATGACGGCGAGGTGTTGCGGCAGA GTATTGAAGACCTGATCGCCCTCCATCCTATTGTCGAGTCAATTGCTGTGGTGCCGGTGGGTCTGACGAAGTTTCGCTTT GAAGGCAAAGCGCCGAAGACGATTCGGGCCGCGATCCAGATTCACGAGACGCCAGAGTGGATTGATACCAACTGGGAACG TCAGCCGCTATGGGAAGACCCCACCGCAACCATCCCTCTTCAGTCGGGGTCACAGCCGCTCCACAACCCGGAAATGGGTT TCTGCTCACGGCTCGGTGCGGTGACCGATATTCCGCTTCGCTGTTATACGCCGGTCGAGGCAGCCGCCGTGATCGATATG ATCGAGCCGTATCAGCGCCGCTGCTATGAGCAATTCGGCTTACACCTGGTGTATGCTTCCGATGAGTTCTACCTGCTGGC CGGGCGCCCGATTCCACCTGCTGAAATCTATGACGATATGCCGCAATACAGCAATGGTGTCGGAATGGTGCGCGACTTCC TCGATACCTGGATGCGCGCCCGGCGGCGCTTGCCGGCTCGGATCGCTCGCCCCACGCAACTGGCGCTGGTGTGTGGCACG CTGATCGCACCGGTCATGGAGCAGATTGCCAACCGCCTGAATCGGATTGAAAACCTGACGGTCAGGGTTGTTCCGGTCGT CAATCAGTTTTTCGGCGAAACGGTAACGGTGAGTGGGTTGTTAACGGCACAGGATGTGATTCCTGCCCTTCGTGCATCTG GTTGTGACCGGGCATTACTGCCACGGGTGATGTTCGACTACACAGGTGAACGATCTATCGACGATTACTCACCGGCCCAA ATCAGCCTGGCAGCAGGTATGCCGGTGGCTATTGCCGGTGAGGCCTCTGAACTGGTGCGCTACGTACAGGCATTGGCCCG CAGTGACCAGGAGTAG
Upstream 100 bases:
>100_bases CCGATCAATCCCTGAATGATGATACAATAGACATACTAAAGCTACGAAACACCTTCATCAGTGTAGCTTTGGCAAACATA TTTCTCGGTTAGGAGCAGGT
Downstream 100 bases:
>100_bases TAGGTGCTGGTCACATAAGTTCTCGCGTGCATCTCAGCTATGGGTCAAGAGGGGGAACTGGTTATGAACGATCAAGAACA AGCACCTAAACGCTACTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: FeS-Containing Oxidoreductase; FeS-Containing Cyanobacterial-Specific Oxidoreductase; PDZ Domain Protein; FeS-Containing Organism-Specific Oxidoreductase; FeS-Containing-Specific Oxidoreductase; Response Regulator Receiver Protein; PDZ Domain-Containing Protein
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MEYQPDVKRITGEGGVIARVAEQSLGEHIGLQAGDIIVAIDGQRLRDVIDYRFAIAEERVTLLIRTATGDEREITIDKDP DDDLGIEFTEPLFDRLRTCNNKCPFCFLTQMPKGFRKTLYLKDDDYRLSFLYANFVTFTNLTEADWERIERQRLSPLHIS VHATDPFWRAIMLGKRDVPDVREQIRRLGKMGIRVHTQIVACPQVNDGEVLRQSIEDLIALHPIVESIAVVPVGLTKFRF EGKAPKTIRAAIQIHETPEWIDTNWERQPLWEDPTATIPLQSGSQPLHNPEMGFCSRLGAVTDIPLRCYTPVEAAAVIDM IEPYQRRCYEQFGLHLVYASDEFYLLAGRPIPPAEIYDDMPQYSNGVGMVRDFLDTWMRARRRLPARIARPTQLALVCGT LIAPVMEQIANRLNRIENLTVRVVPVVNQFFGETVTVSGLLTAQDVIPALRASGCDRALLPRVMFDYTGERSIDDYSPAQ ISLAAGMPVAIAGEASELVRYVQALARSDQE
Sequences:
>Translated_511_residues MEYQPDVKRITGEGGVIARVAEQSLGEHIGLQAGDIIVAIDGQRLRDVIDYRFAIAEERVTLLIRTATGDEREITIDKDP DDDLGIEFTEPLFDRLRTCNNKCPFCFLTQMPKGFRKTLYLKDDDYRLSFLYANFVTFTNLTEADWERIERQRLSPLHIS VHATDPFWRAIMLGKRDVPDVREQIRRLGKMGIRVHTQIVACPQVNDGEVLRQSIEDLIALHPIVESIAVVPVGLTKFRF EGKAPKTIRAAIQIHETPEWIDTNWERQPLWEDPTATIPLQSGSQPLHNPEMGFCSRLGAVTDIPLRCYTPVEAAAVIDM IEPYQRRCYEQFGLHLVYASDEFYLLAGRPIPPAEIYDDMPQYSNGVGMVRDFLDTWMRARRRLPARIARPTQLALVCGT LIAPVMEQIANRLNRIENLTVRVVPVVNQFFGETVTVSGLLTAQDVIPALRASGCDRALLPRVMFDYTGERSIDDYSPAQ ISLAAGMPVAIAGEASELVRYVQALARSDQE >Mature_511_residues MEYQPDVKRITGEGGVIARVAEQSLGEHIGLQAGDIIVAIDGQRLRDVIDYRFAIAEERVTLLIRTATGDEREITIDKDP DDDLGIEFTEPLFDRLRTCNNKCPFCFLTQMPKGFRKTLYLKDDDYRLSFLYANFVTFTNLTEADWERIERQRLSPLHIS VHATDPFWRAIMLGKRDVPDVREQIRRLGKMGIRVHTQIVACPQVNDGEVLRQSIEDLIALHPIVESIAVVPVGLTKFRF EGKAPKTIRAAIQIHETPEWIDTNWERQPLWEDPTATIPLQSGSQPLHNPEMGFCSRLGAVTDIPLRCYTPVEAAAVIDM IEPYQRRCYEQFGLHLVYASDEFYLLAGRPIPPAEIYDDMPQYSNGVGMVRDFLDTWMRARRRLPARIARPTQLALVCGT LIAPVMEQIANRLNRIENLTVRVVPVVNQFFGETVTVSGLLTAQDVIPALRASGCDRALLPRVMFDYTGERSIDDYSPAQ ISLAAGMPVAIAGEASELVRYVQALARSDQE
Specific function: Unknown
COG id: COG1625
COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57753; Mature: 57753
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYQPDVKRITGEGGVIARVAEQSLGEHIGLQAGDIIVAIDGQRLRDVIDYRFAIAEERV CCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCEE TLLIRTATGDEREITIDKDPDDDLGIEFTEPLFDRLRTCNNKCPFCFLTQMPKGFRKTLY EEEEEECCCCCEEEEECCCCCCCCCCEECHHHHHHHHHHCCCCCEEEECCCCCCHHHEEE LKDDDYRLSFLYANFVTFTNLTEADWERIERQRLSPLHISVHATDPFWRAIMLGKRDVPD EECCCCEEEEEEEHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCCHH VREQIRRLGKMGIRVHTQIVACPQVNDGEVLRQSIEDLIALHPIVESIAVVPVGLTKFRF HHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE EGKAPKTIRAAIQIHETPEWIDTNWERQPLWEDPTATIPLQSGSQPLHNPEMGFCSRLGA CCCCCCEEEEEEEECCCCCHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHCCC VTDIPLRCYTPVEAAAVIDMIEPYQRRCYEQFGLHLVYASDEFYLLAGRPIPPAEIYDDM CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEECCCCCHHHHHHCC PQYSNGVGMVRDFLDTWMRARRRLPARIARPTQLALVCGTLIAPVMEQIANRLNRIENLT CHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCE VRVVPVVNQFFGETVTVSGLLTAQDVIPALRASGCDRALLPRVMFDYTGERSIDDYSPAQ EEEEEHHHHHCCCEEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCE ISLAAGMPVAIAGEASELVRYVQALARSDQE EEEECCCCEEEECCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEYQPDVKRITGEGGVIARVAEQSLGEHIGLQAGDIIVAIDGQRLRDVIDYRFAIAEERV CCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCEE TLLIRTATGDEREITIDKDPDDDLGIEFTEPLFDRLRTCNNKCPFCFLTQMPKGFRKTLY EEEEEECCCCCEEEEECCCCCCCCCCEECHHHHHHHHHHCCCCCEEEECCCCCCHHHEEE LKDDDYRLSFLYANFVTFTNLTEADWERIERQRLSPLHISVHATDPFWRAIMLGKRDVPD EECCCCEEEEEEEHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCCHH VREQIRRLGKMGIRVHTQIVACPQVNDGEVLRQSIEDLIALHPIVESIAVVPVGLTKFRF HHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE EGKAPKTIRAAIQIHETPEWIDTNWERQPLWEDPTATIPLQSGSQPLHNPEMGFCSRLGA CCCCCCEEEEEEEECCCCCHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHCCC VTDIPLRCYTPVEAAAVIDMIEPYQRRCYEQFGLHLVYASDEFYLLAGRPIPPAEIYDDM CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEECCCCCHHHHHHCC PQYSNGVGMVRDFLDTWMRARRRLPARIARPTQLALVCGTLIAPVMEQIANRLNRIENLT CHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCE VRVVPVVNQFFGETVTVSGLLTAQDVIPALRASGCDRALLPRVMFDYTGERSIDDYSPAQ EEEEEHHHHHCCCEEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCE ISLAAGMPVAIAGEASELVRYVQALARSDQE EEEECCCCEEEECCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA