| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is iorB [H]
Identifier: 222525133
GI number: 222525133
Start: 2363832
End: 2365997
Strand: Direct
Name: iorB [H]
Synonym: Chy400_1871
Alternate gene names: 222525133
Gene position: 2363832-2365997 (Clockwise)
Preceding gene: 222525132
Following gene: 222525134
Centisome position: 44.86
GC content: 62.88
Gene sequence:
>2166_bases ATGAAGCAGGATACATCACCAAAACGCTGGCGGATGACGCGACGGGGTTTTCTGATCGGGATGGGGCTGGCTGGCGGTGG GTTGGCGCTGGGCGCAATCTTTGGTCTACCGGCGGCACGGCTGGCGCTGGCCGACATGTTCGCTGATGTGATCAATATTC CGTCGAATATGCCGCGCGAACCGCAGCTCTGGTTCACGATCCAGCCCGATGGCCGTGTGACGATGACGATGCCCAAGGTG GAGATGGGGCAGGGTGTGCATACGGCGCTGGCTCAGATTGCGGCTGAGGAGCTGGGTGTGAGTTGGGAACAGATGCAGGT GGTGCAGAGCAGTTCGCTCGGCCCGGTTGCCGATGGTGCCGGTACCAGTGCTTCCTATTCGGTGATCTCACTCTTCCCGT TGCTCCGCGAGATGGCGGCGACGTTGCGCGAGATGTTGCGCACCGCCGGTGCCGATCAGCTCGGTATTGCACCGGCGCAA ACCCGAATTGAGCAGGGATTCGTGGTTGATGCCGATCAGCCGGCACGCCGGATCAGTTTCGCTGAACTGGTCGCCCAACC TCGTAACTGGGAGACTCCCACCGAAGCCGCTCCGCTCACGCCACCTGAGCGCTGGCAGATTATTGGTCAGCCAGTGCCGC GGCTCGATCTCCCGGCCAAGATTCGTGGGGAAGCGGTGTACGGCTACGACGCTCGGATTGAGGGGATGCTCTACGGCGCT GTTGCCCGACCACCGCGTCTGGGGGCAAAGCTGCGGCGGGCAGCAGCGGGTACGGCTCGCAACCGACCGGGCGTGGTTGA GGTGGTGATTCGCGATGGCTTTGCCGGCGTGGTCGCCGAGTCGCGGCTGACGGCGTATGCTGCACTGAACGATCTGGAAC TGGATTGGGAACTGCCGCCGCCGTTCAATCTGGCAGAGCTTCAAGCCCGGCTCGCAGCGCAGGCCGGATCGGGAACGGTG ATTCAGCGGCAGGGTGATGCTGCGGCAGCGCTGCGCGGTGCCGGCGTGATTGAGGCAACCTATCAGACTCCTCTGGCTGC ACACGCCAATCTTGAGCCGCAGGCCGCCCTGGTCGATGTGCAACCGGATCGGGTTCGAGCCTGGGTCAGCACACAATCAC CGGTGCAGGTTGCGCGCACCATAGCCGAGGTGATCGGTCGTAAGCCGGAGACGGTTGAGGTTACGCCAACCTACCTGGGA GGCGGATTTGGACGCAAAGTGACCACAACTGTTGCCACCGAAGCGGCACTGTTGTCGGCAGCGGTTGGGCGTCCTGTTCA CGTTGGCTGGACGCGCACCGAGGAGTTTCGCTACGGGTATCTGCGTCCACCGACCTACGCAACCTTTCGGGCTACCCTCA CGGACGATGGTCGGATCGCCGCGCTTGTGCAACACCATGTGAGCGGGAACGTGTTGTTTGATCTCTTTCCGCCGCCACTG CGCTGGCTGTTCGGTAGTGATTTTGGCGGTTGGCGTGGTGCCCGGCTTATCTACGACATTCCCAACCTGGAAGTCAAGGC GCAAACGGTCGATCTGCCGGTGCCAACCGGCCCCTGGCGGGGGTTGGGTCTACTGGCGAACGTCTTTGCCGTCGAAAGTT TTATCGATGAACTGGCGGTGGCTGCCGGTAGCGATCCGCTCGATTTTCGCCTGCGGCACCTGCCCGATACTGCGACGGGC AATCGCTTCCGTGCCGCGTTGGAGGCAGTTGCTGCAATGGCCGGCTGGTACGATCAGCCACCACCTGGCCGGGCGCGGGG GATTGCCTGTAGTATTGATGCCGGCACAATAGCTGCCCATGTCGCTGAGGTGGGTCTGGTCGAAGGCCGGTTGCGGGTCT ATCGGGTGTGGGCCGCTGTCGATCCCGGTGTCGCCATCAACCCCGACGGTCTGGCGGCTCAGACCGAGGGCGGCATCATG ATGGGGCTGAGTGCAGCACTGTTCGAGCAGATTACGATTGCCGATGGGCGGATTGAAGCCGGTAATTTTGATCGCTACCC GCTCTTGACCATCGCCGATGCGCCAGAGGTGTTTGTGCAGATTCTGCGCAGCGGCGATCAACCGTTTGGCGGTGGTGAAC CGCCGATGGGGCCGATTGCGGCAGCGGTAGCCAATGCGCTGGCTCGCTTAACCGGTGAACGGCGTCGGCAGTGGCCGTTG GTGTAG
Upstream 100 bases:
>100_bases TGATTGCGGCGATGCGTTATAACTACTGTCGTTGTGGCACCTATGCCCGGATCGGGCGAGCAGTGATGCGGGCGGCAGAG CTGATGAAGGAGCGGGCGGG
Downstream 100 bases:
>100_bases GGGGGTGGTTAGGAAATAGGATGTAGAAGATAGGATATAGGGTGTAGGATATAAGATATCGTGGGGCTGAAGCTCTTGCT CACGATGTGCAAGTTCCTGC
Product: molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 721; Mature: 721
Protein sequence:
>721_residues MKQDTSPKRWRMTRRGFLIGMGLAGGGLALGAIFGLPAARLALADMFADVINIPSNMPREPQLWFTIQPDGRVTMTMPKV EMGQGVHTALAQIAAEELGVSWEQMQVVQSSSLGPVADGAGTSASYSVISLFPLLREMAATLREMLRTAGADQLGIAPAQ TRIEQGFVVDADQPARRISFAELVAQPRNWETPTEAAPLTPPERWQIIGQPVPRLDLPAKIRGEAVYGYDARIEGMLYGA VARPPRLGAKLRRAAAGTARNRPGVVEVVIRDGFAGVVAESRLTAYAALNDLELDWELPPPFNLAELQARLAAQAGSGTV IQRQGDAAAALRGAGVIEATYQTPLAAHANLEPQAALVDVQPDRVRAWVSTQSPVQVARTIAEVIGRKPETVEVTPTYLG GGFGRKVTTTVATEAALLSAAVGRPVHVGWTRTEEFRYGYLRPPTYATFRATLTDDGRIAALVQHHVSGNVLFDLFPPPL RWLFGSDFGGWRGARLIYDIPNLEVKAQTVDLPVPTGPWRGLGLLANVFAVESFIDELAVAAGSDPLDFRLRHLPDTATG NRFRAALEAVAAMAGWYDQPPPGRARGIACSIDAGTIAAHVAEVGLVEGRLRVYRVWAAVDPGVAINPDGLAAQTEGGIM MGLSAALFEQITIADGRIEAGNFDRYPLLTIADAPEVFVQILRSGDQPFGGGEPPMGPIAAAVANALARLTGERRRQWPL V
Sequences:
>Translated_721_residues MKQDTSPKRWRMTRRGFLIGMGLAGGGLALGAIFGLPAARLALADMFADVINIPSNMPREPQLWFTIQPDGRVTMTMPKV EMGQGVHTALAQIAAEELGVSWEQMQVVQSSSLGPVADGAGTSASYSVISLFPLLREMAATLREMLRTAGADQLGIAPAQ TRIEQGFVVDADQPARRISFAELVAQPRNWETPTEAAPLTPPERWQIIGQPVPRLDLPAKIRGEAVYGYDARIEGMLYGA VARPPRLGAKLRRAAAGTARNRPGVVEVVIRDGFAGVVAESRLTAYAALNDLELDWELPPPFNLAELQARLAAQAGSGTV IQRQGDAAAALRGAGVIEATYQTPLAAHANLEPQAALVDVQPDRVRAWVSTQSPVQVARTIAEVIGRKPETVEVTPTYLG GGFGRKVTTTVATEAALLSAAVGRPVHVGWTRTEEFRYGYLRPPTYATFRATLTDDGRIAALVQHHVSGNVLFDLFPPPL RWLFGSDFGGWRGARLIYDIPNLEVKAQTVDLPVPTGPWRGLGLLANVFAVESFIDELAVAAGSDPLDFRLRHLPDTATG NRFRAALEAVAAMAGWYDQPPPGRARGIACSIDAGTIAAHVAEVGLVEGRLRVYRVWAAVDPGVAINPDGLAAQTEGGIM MGLSAALFEQITIADGRIEAGNFDRYPLLTIADAPEVFVQILRSGDQPFGGGEPPMGPIAAAVANALARLTGERRRQWPL V >Mature_721_residues MKQDTSPKRWRMTRRGFLIGMGLAGGGLALGAIFGLPAARLALADMFADVINIPSNMPREPQLWFTIQPDGRVTMTMPKV EMGQGVHTALAQIAAEELGVSWEQMQVVQSSSLGPVADGAGTSASYSVISLFPLLREMAATLREMLRTAGADQLGIAPAQ TRIEQGFVVDADQPARRISFAELVAQPRNWETPTEAAPLTPPERWQIIGQPVPRLDLPAKIRGEAVYGYDARIEGMLYGA VARPPRLGAKLRRAAAGTARNRPGVVEVVIRDGFAGVVAESRLTAYAALNDLELDWELPPPFNLAELQARLAAQAGSGTV IQRQGDAAAALRGAGVIEATYQTPLAAHANLEPQAALVDVQPDRVRAWVSTQSPVQVARTIAEVIGRKPETVEVTPTYLG GGFGRKVTTTVATEAALLSAAVGRPVHVGWTRTEEFRYGYLRPPTYATFRATLTDDGRIAALVQHHVSGNVLFDLFPPPL RWLFGSDFGGWRGARLIYDIPNLEVKAQTVDLPVPTGPWRGLGLLANVFAVESFIDELAVAAGSDPLDFRLRHLPDTATG NRFRAALEAVAAMAGWYDQPPPGRARGIACSIDAGTIAAHVAEVGLVEGRLRVYRVWAAVDPGVAINPDGLAAQTEGGIM MGLSAALFEQITIADGRIEAGNFDRYPLLTIADAPEVFVQILRSGDQPFGGGEPPMGPIAAAVANALARLTGERRRQWPL V
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789230, Length=396, Percent_Identity=28.2828282828283, Blast_Score=86, Evalue=1e-17, Organism=Escherichia coli, GI1789246, Length=554, Percent_Identity=22.9241877256318, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI1786478, Length=390, Percent_Identity=27.4358974358974, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 77186; Mature: 77186
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQDTSPKRWRMTRRGFLIGMGLAGGGLALGAIFGLPAARLALADMFADVINIPSNMPRE CCCCCCCHHHHHHHCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC PQLWFTIQPDGRVTMTMPKVEMGQGVHTALAQIAAEELGVSWEQMQVVQSSSLGPVADGA CCEEEEECCCCEEEEEECCHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC GTSASYSVISLFPLLREMAATLREMLRTAGADQLGIAPAQTRIEQGFVVDADQPARRISF CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCEEECCCCCHHHHHH AELVAQPRNWETPTEAAPLTPPERWQIIGQPVPRLDLPAKIRGEAVYGYDARIEGMLYGA HHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEECCCCEECEEEEEC VARPPRLGAKLRRAAAGTARNRPGVVEVVIRDGFAGVVAESRLTAYAALNDLELDWELPP CCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHEEEECCCCEEEECCCC PFNLAELQARLAAQAGSGTVIQRQGDAAAALRGAGVIEATYQTPLAAHANLEPQAALVDV CCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCEEEEECCCCEEECCCCCCCEEEEEC QPDRVRAWVSTQSPVQVARTIAEVIGRKPETVEVTPTYLGGGFGRKVTTTVATEAALLSA CHHHEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCEEEHHHHHHHHHHHH AVGRPVHVGWTRTEEFRYGYLRPPTYATFRATLTDDGRIAALVQHHVSGNVLFDLFPPPL HCCCCEEECCCCCHHCCCCCCCCCCCEEEEEEECCCCCEEEEHHHHCCCCEEEECCCCHH RWLFGSDFGGWRGARLIYDIPNLEVKAQTVDLPVPTGPWRGLGLLANVFAVESFIDELAV HHHHCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH AAGSDPLDFRLRHLPDTATGNRFRAALEAVAAMAGWYDQPPPGRARGIACSIDAGTIAAH HCCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHH VAEVGLVEGRLRVYRVWAAVDPGVAINPDGLAAQTEGGIMMGLSAALFEQITIADGRIEA HHHHHHHCCCEEEEEEEEECCCCCEECCCCCCEECCCCEEEHHHHHHHHHEEEECCEEEC GNFDRYPLLTIADAPEVFVQILRSGDQPFGGGEPPMGPIAAAVANALARLTGERRRQWPL CCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC V C >Mature Secondary Structure MKQDTSPKRWRMTRRGFLIGMGLAGGGLALGAIFGLPAARLALADMFADVINIPSNMPRE CCCCCCCHHHHHHHCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC PQLWFTIQPDGRVTMTMPKVEMGQGVHTALAQIAAEELGVSWEQMQVVQSSSLGPVADGA CCEEEEECCCCEEEEEECCHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC GTSASYSVISLFPLLREMAATLREMLRTAGADQLGIAPAQTRIEQGFVVDADQPARRISF CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCEEECCCCCHHHHHH AELVAQPRNWETPTEAAPLTPPERWQIIGQPVPRLDLPAKIRGEAVYGYDARIEGMLYGA HHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEECCCCEECEEEEEC VARPPRLGAKLRRAAAGTARNRPGVVEVVIRDGFAGVVAESRLTAYAALNDLELDWELPP CCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHEEEECCCCEEEECCCC PFNLAELQARLAAQAGSGTVIQRQGDAAAALRGAGVIEATYQTPLAAHANLEPQAALVDV CCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCEEEEECCCCEEECCCCCCCEEEEEC QPDRVRAWVSTQSPVQVARTIAEVIGRKPETVEVTPTYLGGGFGRKVTTTVATEAALLSA CHHHEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCEEEHHHHHHHHHHHH AVGRPVHVGWTRTEEFRYGYLRPPTYATFRATLTDDGRIAALVQHHVSGNVLFDLFPPPL HCCCCEEECCCCCHHCCCCCCCCCCCEEEEEEECCCCCEEEEHHHHCCCCEEEECCCCHH RWLFGSDFGGWRGARLIYDIPNLEVKAQTVDLPVPTGPWRGLGLLANVFAVESFIDELAV HHHHCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH AAGSDPLDFRLRHLPDTATGNRFRAALEAVAAMAGWYDQPPPGRARGIACSIDAGTIAAH HCCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHH VAEVGLVEGRLRVYRVWAAVDPGVAINPDGLAAQTEGGIMMGLSAALFEQITIADGRIEA HHHHHHHCCCEEEEEEEEECCCCCEECCCCCCEECCCCEEEHHHHHHHHHEEEECCEEEC GNFDRYPLLTIADAPEVFVQILRSGDQPFGGGEPPMGPIAAAVANALARLTGERRRQWPL CCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]