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The map label for this gene is ftsY [H]

Identifier: 222525130

GI number: 222525130

Start: 2361295

End: 2362272

Strand: Reverse

Name: ftsY [H]

Synonym: Chy400_1868

Alternate gene names: 222525130

Gene position: 2362272-2361295 (Counterclockwise)

Preceding gene: 222525131

Following gene: 222525129

Centisome position: 44.83

GC content: 58.08

Gene sequence:

>978_bases
ATGTTTCGCCGTCTATTCGGTCGCGCTCAGGATGCACCGCGCAGCGAAGAAGAAGCTGCGCGCGAAGAAGAGCAGGTTGC
TGCGTCACTGGAAAAATCGCGCAAAGGTATCTTTGGCCGGATCGCGCAACTCTTCGCTGGTGACGATCCTATCACCGATG
AGCTGTGGGACGAACTGGAAGAGGCATTGATCCAGGCCGATGTCGGGCTGGAGACAACCCAGTATCTGGTCAACCGCACC
ATTGACCGGGTCAATCGTCACGGGGTCAAAAAGGCACGCGAGGCGCGCGAGATGCTCAAAGCCGAAATGGTGCGTACCTT
TGCCGAGTACGCCGGTCAACAGCGCCCCAATGCCCGACCCTACGTGATTCTGGTCGTTGGCGTGAACGGTGCCGGCAAAA
CAACCCTGATCGCGAAGCTGGCCCATCGCTACAAAAACCGTTTCGGTAAGAAGGTCTTGCTGGCAGCAGGAGACACCTTC
CGCGCGGCTGCCACCGAACAACTCGAAACCTGGGCCGAGCGAGCCGGCGTGCCGTGTGTCAGCCTCGGCCAGGGTGCCGA
CGCCGCTGCCGTTGTCTACAAGGCCATTGATGCCGCGCTCGAACAAGACGTTGACGTGCTGATTATCGACACTGCCGGTC
GCCTGCACGCCAAATACAACCTGATGCAAGAACTGGAAAAAATCCGCAACATCATTGGCCGCAAACTACCGGGAGCACCG
CACGAGACCATCCTGGTGATCGATGCCACAACCGGCCAGAACGGCGTGTTACAGGCGAAGGCATTTCTGAAAGCTGCCGG
CGTCACCGATGTCGCCATCACCAAAATGGACGGCACAGCGAAGGGAGGCATTGCCTTCGCGATTGCCCAGGACATCGAAC
GACCAATTCGCTACATCGGCACCGGCGAAAAGATGGACGATCTGGCGCTGTTTGATGCGCAAACCTTCGTTGATGCACTT
TTTGCCGATTCAAAGTAG

Upstream 100 bases:

>100_bases
CTGGTTACGTTGCCCAACGGAGCTGACCTGCCACAATCCGCAGCTAATCAGCGAACAACCGCCAGCAGCGTGTTGTTCGC
ACCGCATAAGGGGAACCGGT

Downstream 100 bases:

>100_bases
TAAGTCAAATAGCACGCAAAGCAATGCGCTAACCGACCTTTCTTACTCACCAAACGAGTAAGCGGGTCGTAGGGATACGT
GTGGCGTGTTCAGGTTCAGA

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MFRRLFGRAQDAPRSEEEAAREEEQVAASLEKSRKGIFGRIAQLFAGDDPITDELWDELEEALIQADVGLETTQYLVNRT
IDRVNRHGVKKAREAREMLKAEMVRTFAEYAGQQRPNARPYVILVVGVNGAGKTTLIAKLAHRYKNRFGKKVLLAAGDTF
RAAATEQLETWAERAGVPCVSLGQGADAAAVVYKAIDAALEQDVDVLIIDTAGRLHAKYNLMQELEKIRNIIGRKLPGAP
HETILVIDATTGQNGVLQAKAFLKAAGVTDVAITKMDGTAKGGIAFAIAQDIERPIRYIGTGEKMDDLALFDAQTFVDAL
FADSK

Sequences:

>Translated_325_residues
MFRRLFGRAQDAPRSEEEAAREEEQVAASLEKSRKGIFGRIAQLFAGDDPITDELWDELEEALIQADVGLETTQYLVNRT
IDRVNRHGVKKAREAREMLKAEMVRTFAEYAGQQRPNARPYVILVVGVNGAGKTTLIAKLAHRYKNRFGKKVLLAAGDTF
RAAATEQLETWAERAGVPCVSLGQGADAAAVVYKAIDAALEQDVDVLIIDTAGRLHAKYNLMQELEKIRNIIGRKLPGAP
HETILVIDATTGQNGVLQAKAFLKAAGVTDVAITKMDGTAKGGIAFAIAQDIERPIRYIGTGEKMDDLALFDAQTFVDAL
FADSK
>Mature_325_residues
MFRRLFGRAQDAPRSEEEAAREEEQVAASLEKSRKGIFGRIAQLFAGDDPITDELWDELEEALIQADVGLETTQYLVNRT
IDRVNRHGVKKAREAREMLKAEMVRTFAEYAGQQRPNARPYVILVVGVNGAGKTTLIAKLAHRYKNRFGKKVLLAAGDTF
RAAATEQLETWAERAGVPCVSLGQGADAAAVVYKAIDAALEQDVDVLIIDTAGRLHAKYNLMQELEKIRNIIGRKLPGAP
HETILVIDATTGQNGVLQAKAFLKAAGVTDVAITKMDGTAKGGIAFAIAQDIERPIRYIGTGEKMDDLALFDAQTFVDAL
FADSK

Specific function: Required for normal cell growth and morphogenesis; translocation of at least 1 protein is impaired in its absence [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=289, Percent_Identity=31.4878892733564, Blast_Score=133, Evalue=2e-31,
Organism=Homo sapiens, GI226371618, Length=201, Percent_Identity=36.318407960199, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI295424842, Length=351, Percent_Identity=27.3504273504274, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI23308697, Length=351, Percent_Identity=27.3504273504274, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=2e-15,
Organism=Escherichia coli, GI1789874, Length=327, Percent_Identity=45.2599388379205, Blast_Score=243, Evalue=2e-65,
Organism=Escherichia coli, GI1788963, Length=269, Percent_Identity=36.4312267657993, Blast_Score=153, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17539958, Length=302, Percent_Identity=29.1390728476821, Blast_Score=132, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI193206261, Length=317, Percent_Identity=29.3375394321767, Blast_Score=97, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6325345, Length=200, Percent_Identity=39.5, Blast_Score=139, Evalue=9e-34,
Organism=Saccharomyces cerevisiae, GI6320498, Length=233, Percent_Identity=30.9012875536481, Blast_Score=83, Evalue=7e-17,
Organism=Drosophila melanogaster, GI17647949, Length=278, Percent_Identity=31.6546762589928, Blast_Score=136, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24641198, Length=263, Percent_Identity=31.1787072243346, Blast_Score=99, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 35541; Mature: 35541

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRRLFGRAQDAPRSEEEAAREEEQVAASLEKSRKGIFGRIAQLFAGDDPITDELWDELE
CCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
EALIQADVGLETTQYLVNRTIDRVNRHGVKKAREAREMLKAEMVRTFAEYAGQQRPNARP
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
YVILVVGVNGAGKTTLIAKLAHRYKNRFGKKVLLAAGDTFRAAATEQLETWAERAGVPCV
EEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEE
SLGQGADAAAVVYKAIDAALEQDVDVLIIDTAGRLHAKYNLMQELEKIRNIIGRKLPGAP
ECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
HETILVIDATTGQNGVLQAKAFLKAAGVTDVAITKMDGTAKGGIAFAIAQDIERPIRYIG
CCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHC
TGEKMDDLALFDAQTFVDALFADSK
CCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFRRLFGRAQDAPRSEEEAAREEEQVAASLEKSRKGIFGRIAQLFAGDDPITDELWDELE
CCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
EALIQADVGLETTQYLVNRTIDRVNRHGVKKAREAREMLKAEMVRTFAEYAGQQRPNARP
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
YVILVVGVNGAGKTTLIAKLAHRYKNRFGKKVLLAAGDTFRAAATEQLETWAERAGVPCV
EEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEE
SLGQGADAAAVVYKAIDAALEQDVDVLIIDTAGRLHAKYNLMQELEKIRNIIGRKLPGAP
ECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
HETILVIDATTGQNGVLQAKAFLKAAGVTDVAITKMDGTAKGGIAFAIAQDIERPIRYIG
CCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHC
TGEKMDDLALFDAQTFVDALFADSK
CCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584053; 9384377; 8654983 [H]