| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yugP [H]
Identifier: 222525104
GI number: 222525104
Start: 2330365
End: 2331072
Strand: Direct
Name: yugP [H]
Synonym: Chy400_1842
Alternate gene names: 222525104
Gene position: 2330365-2331072 (Clockwise)
Preceding gene: 222525102
Following gene: 222525105
Centisome position: 44.23
GC content: 55.51
Gene sequence:
>708_bases ATGCCGTTCTTTTTCGATCCAACTTATCTGATCTTTGCCGTGCCGGCGATGCTCTTTGCCCTTTGGGCACAGTTTCAGGT TCAGTCGGCCTTTAATAAATGGTCGCAAGTCGCCAATATGCGCCGCCTGAATGGGTTTGATGTGGCGCGGGTGTTGATGC GTAACGAAGGACTGGATCATGTCGGGGTCGAGACGATTCCCGGTATGCTAACCGATCACTACGATCCTTCCAGCAAAGTC ATCCGGCTTTCGCAAGGGTCATTGCAGCCGTCAGTCGCAGCGATGGCCATTGTCGCGCATGAGTTGGGCCACGCCGCACA AGATAAAGAGGGCTATGCCTGGTTGCGGGTTCGTTCCGGGATTGTCGGTTTTGCCAACATCGGTTCTCAGCTTGGTACCT GGCTCTTCTTTATCGGGATGCTGCTGAGTGCTGCCGGAGGCCGGGGGTTCGGTTTCCAGTTGGCCGTTGTTGGGGTCATT CTGTTCAGTGCAGCGGTAGCTTTTACGCTGGTTACCCTGCCGGTTGAGTTTAACGCCAGCGCTCGTGCCCGTGAGATGTT GCAACGGGCCGGTCTGGTCACTGTGCAAGAGGCCGAAGGCGTGAACGCGGTGTTGAATGCAGCGGCGTTAACGTATGTTG CTGCCGCAGCACAGGCTATTGCGCAGTTGCTGTACTTTGTGACTGTTTTGATGCGACGGAGGGAATAA
Upstream 100 bases:
>100_bases TGCAAAAATCCAACATTCTACCAACATCCGGTTGTCATTCAAGAGTGGTATACTGTGCGTAGCATTGAGACACATTACAT TCCCTCTGAGGAGGTCGTCT
Downstream 100 bases:
>100_bases TCGCATGACGGAAGAAGAGTTGCGGCGAAAGTTAGTCCACGGGTTGCTGAGTCTGGTGCTGAGCCTGGCAGCAGCATGGC TGGCGACGTATCTGACGAAT
Product: peptidase membrane zinc metallopeptidase putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MPFFFDPTYLIFAVPAMLFALWAQFQVQSAFNKWSQVANMRRLNGFDVARVLMRNEGLDHVGVETIPGMLTDHYDPSSKV IRLSQGSLQPSVAAMAIVAHELGHAAQDKEGYAWLRVRSGIVGFANIGSQLGTWLFFIGMLLSAAGGRGFGFQLAVVGVI LFSAAVAFTLVTLPVEFNASARAREMLQRAGLVTVQEAEGVNAVLNAAALTYVAAAAQAIAQLLYFVTVLMRRRE
Sequences:
>Translated_235_residues MPFFFDPTYLIFAVPAMLFALWAQFQVQSAFNKWSQVANMRRLNGFDVARVLMRNEGLDHVGVETIPGMLTDHYDPSSKV IRLSQGSLQPSVAAMAIVAHELGHAAQDKEGYAWLRVRSGIVGFANIGSQLGTWLFFIGMLLSAAGGRGFGFQLAVVGVI LFSAAVAFTLVTLPVEFNASARAREMLQRAGLVTVQEAEGVNAVLNAAALTYVAAAAQAIAQLLYFVTVLMRRRE >Mature_234_residues PFFFDPTYLIFAVPAMLFALWAQFQVQSAFNKWSQVANMRRLNGFDVARVLMRNEGLDHVGVETIPGMLTDHYDPSSKVI RLSQGSLQPSVAAMAIVAHELGHAAQDKEGYAWLRVRSGIVGFANIGSQLGTWLFFIGMLLSAAGGRGFGFQLAVVGVIL FSAAVAFTLVTLPVEFNASARAREMLQRAGLVTVQEAEGVNAVLNAAALTYVAAAAQAIAQLLYFVTVLMRRRE
Specific function: Unknown
COG id: COG2738
COG function: function code R; Predicted Zn-dependent protease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007395 [H]
Pfam domain/function: PF04298 Zn_peptidase_2 [H]
EC number: NA
Molecular weight: Translated: 25529; Mature: 25398
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFFFDPTYLIFAVPAMLFALWAQFQVQSAFNKWSQVANMRRLNGFDVARVLMRNEGLDH CCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC VGVETIPGMLTDHYDPSSKVIRLSQGSLQPSVAAMAIVAHELGHAAQDKEGYAWLRVRSG CCHHHHCHHHHCCCCCCHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC IVGFANIGSQLGTWLFFIGMLLSAAGGRGFGFQLAVVGVILFSAAVAFTLVTLPVEFNAS CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEECCCC ARAREMLQRAGLVTVQEAEGVNAVLNAAALTYVAAAAQAIAQLLYFVTVLMRRRE HHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PFFFDPTYLIFAVPAMLFALWAQFQVQSAFNKWSQVANMRRLNGFDVARVLMRNEGLDH CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC VGVETIPGMLTDHYDPSSKVIRLSQGSLQPSVAAMAIVAHELGHAAQDKEGYAWLRVRSG CCHHHHCHHHHCCCCCCHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC IVGFANIGSQLGTWLFFIGMLLSAAGGRGFGFQLAVVGVILFSAAVAFTLVTLPVEFNAS CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEECCCC ARAREMLQRAGLVTVQEAEGVNAVLNAAALTYVAAAAQAIAQLLYFVTVLMRRRE HHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]