| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525054
Identifier: 222525054
GI number: 222525054
Start: 2264030
End: 2264500
Strand: Reverse
Name: 222525054
Synonym: Chy400_1790
Alternate gene names: NA
Gene position: 2264500-2264030 (Counterclockwise)
Preceding gene: 222525057
Following gene: 222525052
Centisome position: 42.98
GC content: 50.74
Gene sequence:
>471_bases ATGGAGCCGAAACCTCTATCAAGGACGGGAGCCTTGCTCATCGGTCTGTTCTTCGCAATCATCGGCGCTGTCGTTATATT TGTAGGATGGCTATTGCAACAATCAATCCGCGAGCAGTTGAACACGATGATCAGTGGCACAGGCACGGTTGTTGAGATCA TTAAAGTTGACGAGATTGGCGAAGACCCCAGATTCTACCCGGTCATTGAATTCCGCACTCCAGCGGGTGAAGTCATTCGT TTTGAGGAAAAAACCGGTGGCAGTCAATTCGCCTACCGAGTCGGCCAACAAGTAGCCATCCTGTATGATCCTCAATTCCC ACAAGATGCTAGAATTGACTCCTGGTTCGAGCTATGGTTTCCTGCTTTTGCGGTCATCTTGCTCGGTAGTGGTGCATTGG TAGCGGGTCTGGCAGGATGCGGCATGGCCATCTTCGATACACGTAACCAGACCACATCGCATCCAGGGTAA
Upstream 100 bases:
>100_bases GAATATAGAACCGATTGATATTGATCGGCAAATATGTTTATATGACAGAGAACATTTCTCGACAATGACATCTTACCTAT CGTAAGGGGATAGCCTCGTT
Downstream 100 bases:
>100_bases TCCCTCTCAACAACCCATCGCTAGCCCACAGAGTCTACTCCCACAAATCACAACCCGTTTCAGGAGGGGAAACGTAATGG ATCACCTCTCCTGTCCCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MEPKPLSRTGALLIGLFFAIIGAVVIFVGWLLQQSIREQLNTMISGTGTVVEIIKVDEIGEDPRFYPVIEFRTPAGEVIR FEEKTGGSQFAYRVGQQVAILYDPQFPQDARIDSWFELWFPAFAVILLGSGALVAGLAGCGMAIFDTRNQTTSHPG
Sequences:
>Translated_156_residues MEPKPLSRTGALLIGLFFAIIGAVVIFVGWLLQQSIREQLNTMISGTGTVVEIIKVDEIGEDPRFYPVIEFRTPAGEVIR FEEKTGGSQFAYRVGQQVAILYDPQFPQDARIDSWFELWFPAFAVILLGSGALVAGLAGCGMAIFDTRNQTTSHPG >Mature_156_residues MEPKPLSRTGALLIGLFFAIIGAVVIFVGWLLQQSIREQLNTMISGTGTVVEIIKVDEIGEDPRFYPVIEFRTPAGEVIR FEEKTGGSQFAYRVGQQVAILYDPQFPQDARIDSWFELWFPAFAVILLGSGALVAGLAGCGMAIFDTRNQTTSHPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17109; Mature: 17109
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPKPLSRTGALLIGLFFAIIGAVVIFVGWLLQQSIREQLNTMISGTGTVVEIIKVDEIG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC EDPRFYPVIEFRTPAGEVIRFEEKTGGSQFAYRVGQQVAILYDPQFPQDARIDSWFELWF CCCCEEEEEEEECCCCCEEEECCCCCCHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHH PAFAVILLGSGALVAGLAGCGMAIFDTRNQTTSHPG HHHHHHHHCCCHHHHHHHHCCEEEEECCCCCCCCCC >Mature Secondary Structure MEPKPLSRTGALLIGLFFAIIGAVVIFVGWLLQQSIREQLNTMISGTGTVVEIIKVDEIG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC EDPRFYPVIEFRTPAGEVIRFEEKTGGSQFAYRVGQQVAILYDPQFPQDARIDSWFELWF CCCCEEEEEEEECCCCCEEEECCCCCCHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHH PAFAVILLGSGALVAGLAGCGMAIFDTRNQTTSHPG HHHHHHHHCCCHHHHHHHHCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA