| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is wcaA [C]
Identifier: 222525040
GI number: 222525040
Start: 2243695
End: 2244627
Strand: Direct
Name: wcaA [C]
Synonym: Chy400_1776
Alternate gene names: 222525040
Gene position: 2243695-2244627 (Clockwise)
Preceding gene: 222525039
Following gene: 222525041
Centisome position: 42.58
GC content: 53.38
Gene sequence:
>933_bases ATGCTGGTTTCAGTCATTATTGCAACAAAGCAGCGCCCACAGCCGTTATACGATGCGGTGCAGAGTGTTTTTCAGAGCAC GTATCAGGAGTTTGAGTTGTTCGTGATTGATCAAAGTCCTGATAATGCCAGTGAGATGATTCTCTCTCCATTCCACAGCG ATCCGCGCTTCCACTATCTGCTCAATCGGCGCCCCGGCTTTGGGGCGGCGAGTTCGCGGAATCTGGGAATTGCGGCGAGT CACGGTGAGATTGTAGCGTTGATTGATGATGATGTGGTTGTGAAACCCGATTGGCTGGCCCAGATTGTTGCCGAATTCAG TGCTGATCCAGAGCTGGATTTTATTGCCGGAAGACTCAGCGCATCACCATACGACCGGACGGCCGGCTATACGCCGGAAT TTGAGGCATGGCCGTACCTGTCGCGCTGGCACTTTCCGTTGCACGCTTCAGGCGCTAACTTTAGTATGCGACGACGCCTG TTTGATCGAGTTGGTGGCTACGATGAATTTTGTGGCCCTGGGAGCCGTCTGCGGGCATCAGATGATACCGATCTGTGCTG GCGAATTGTGCGGAGTGGCGCTCGCTACAAGATTTGTCCGCATATTGAAGTGGTGCATCTCCATGGATTTCGTCCGCAAG CTGAAGCTGAAGCGCTCTTTGCCCGCTATCAGTATGGCAACGGCGGCAATTTTGGGCGATTTACCCGGCGTGGCGATCTG TTCGCCGGTGCCTGGTTTCTGGCTCGTGAAGTAAAACATCTTGTGCGGGCACTGCCAGCCCTACTGCGTGGAGATCGCCG GGAGTTGATGTACTCGCACCAGCGGTTACGTGGTTTCTGGGATGGTTTTCGGCTGCCTCCGAATGAAGGTTTTGTCAGTG GTGAAAAATTGCGTCAAATGATGGTATCCCTATCTGAGACTTCCTCTGCATAA
Upstream 100 bases:
>100_bases GCGGTCTGGCCCATCCAATAAACCGTGCGCAGCTTGTCTATCAAGGGGTAACAGGGGTGCCGGCAATCATCGAGCGATCA CTGTAGTGTGGAGAGAATAT
Downstream 100 bases:
>100_bases TACACTCGTGATGGAAATAGAGCAGTTGCTGTCCGATCTTTGTTTTAGTCAATGCTCTTAGATTCAGTGCAGAAGACTCA ACTATGTTGCTCCCTACTAT
Product: glycosyl transferase family 2 protein
Products: NA
Alternate protein names: Glycosyltransferase; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Glycosyl Transferase Group 2 Family Protein; Glycosyltransferase Protein; Succinoglycan Biosynthesis Protein; Glycosyl Transferase; Glycoside Hydrolase Family 2 Protein; LOW QUALITY PROTEIN Succinoglycan Biosynthesis Protein; Group 2 Glycosyl Transferase; WecB/TagA/CpsF Family Glycosyl Transferase
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MLVSVIIATKQRPQPLYDAVQSVFQSTYQEFELFVIDQSPDNASEMILSPFHSDPRFHYLLNRRPGFGAASSRNLGIAAS HGEIVALIDDDVVVKPDWLAQIVAEFSADPELDFIAGRLSASPYDRTAGYTPEFEAWPYLSRWHFPLHASGANFSMRRRL FDRVGGYDEFCGPGSRLRASDDTDLCWRIVRSGARYKICPHIEVVHLHGFRPQAEAEALFARYQYGNGGNFGRFTRRGDL FAGAWFLAREVKHLVRALPALLRGDRRELMYSHQRLRGFWDGFRLPPNEGFVSGEKLRQMMVSLSETSSA
Sequences:
>Translated_310_residues MLVSVIIATKQRPQPLYDAVQSVFQSTYQEFELFVIDQSPDNASEMILSPFHSDPRFHYLLNRRPGFGAASSRNLGIAAS HGEIVALIDDDVVVKPDWLAQIVAEFSADPELDFIAGRLSASPYDRTAGYTPEFEAWPYLSRWHFPLHASGANFSMRRRL FDRVGGYDEFCGPGSRLRASDDTDLCWRIVRSGARYKICPHIEVVHLHGFRPQAEAEALFARYQYGNGGNFGRFTRRGDL FAGAWFLAREVKHLVRALPALLRGDRRELMYSHQRLRGFWDGFRLPPNEGFVSGEKLRQMMVSLSETSSA >Mature_310_residues MLVSVIIATKQRPQPLYDAVQSVFQSTYQEFELFVIDQSPDNASEMILSPFHSDPRFHYLLNRRPGFGAASSRNLGIAAS HGEIVALIDDDVVVKPDWLAQIVAEFSADPELDFIAGRLSASPYDRTAGYTPEFEAWPYLSRWHFPLHASGANFSMRRRL FDRVGGYDEFCGPGSRLRASDDTDLCWRIVRSGARYKICPHIEVVHLHGFRPQAEAEALFARYQYGNGGNFGRFTRRGDL FAGAWFLAREVKHLVRALPALLRGDRRELMYSHQRLRGFWDGFRLPPNEGFVSGEKLRQMMVSLSETSSA
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35196; Mature: 35196
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVSVIIATKQRPQPLYDAVQSVFQSTYQEFELFVIDQSPDNASEMILSPFHSDPRFHYL CEEEEEEECCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHCCCCCCCCEEEE LNRRPGFGAASSRNLGIAASHGEIVALIDDDVVVKPDWLAQIVAEFSADPELDFIAGRLS EECCCCCCCCCCCCCCEEECCCCEEEEECCCEEECCHHHHHHHHHHCCCCCHHHHHHHCC ASPYDRTAGYTPEFEAWPYLSRWHFPLHASGANFSMRRRLFDRVGGYDEFCGPGSRLRAS CCCCCCCCCCCCCCCCCCCHHHCCCEEECCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCC DDTDLCWRIVRSGARYKICPHIEVVHLHGFRPQAEAEALFARYQYGNGGNFGRFTRRGDL CCHHHHHHHHHCCCCEEECCCEEEEEEECCCCCHHHHHHHHHEECCCCCCCCCCCCCCCH FAGAWFLAREVKHLVRALPALLRGDRRELMYSHQRLRGFWDGFRLPPNEGFVSGEKLRQM HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH MVSLSETSSA HHHHHHCCCC >Mature Secondary Structure MLVSVIIATKQRPQPLYDAVQSVFQSTYQEFELFVIDQSPDNASEMILSPFHSDPRFHYL CEEEEEEECCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHCCCCCCCCEEEE LNRRPGFGAASSRNLGIAASHGEIVALIDDDVVVKPDWLAQIVAEFSADPELDFIAGRLS EECCCCCCCCCCCCCCEEECCCCEEEEECCCEEECCHHHHHHHHHHCCCCCHHHHHHHCC ASPYDRTAGYTPEFEAWPYLSRWHFPLHASGANFSMRRRLFDRVGGYDEFCGPGSRLRAS CCCCCCCCCCCCCCCCCCCHHHCCCEEECCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCC DDTDLCWRIVRSGARYKICPHIEVVHLHGFRPQAEAEALFARYQYGNGGNFGRFTRRGDL CCHHHHHHHHHCCCCEEECCCEEEEEEECCCCCHHHHHHHHHEECCCCCCCCCCCCCCCH FAGAWFLAREVKHLVRALPALLRGDRRELMYSHQRLRGFWDGFRLPPNEGFVSGEKLRQM HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH MVSLSETSSA HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA