| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is epsJ [H]
Identifier: 222525037
GI number: 222525037
Start: 2240914
End: 2241921
Strand: Direct
Name: epsJ [H]
Synonym: Chy400_1773
Alternate gene names: 222525037
Gene position: 2240914-2241921 (Clockwise)
Preceding gene: 222525036
Following gene: 222525038
Centisome position: 42.53
GC content: 50.79
Gene sequence:
>1008_bases ATGACAGCCAATCATCAAGTACCATTATTATCGGTCACGGTTCTGAATTACAACTATGGGCATTTTCTGGCGAACTGCCT TGATTCAATCCTGCATCAGAGCTTTACCGATTTTGAAGTCATCCTGATCAATGATTGTTCAACCGACAATTCGCTGGAGG TAATTCAACCGTATCTGCGCGATCCGCGAATCCGCTTGGTCAATCATACGCAGAATAAAGGCTTCGTGGCTTCGTTGATC GAAGGAATGGCATTGTCGCGGGGAACCTATCTGAATGTGATCTCGGCTGATGACTGGGTTGTTTCGCCGCATGCGTTTGC CCGTCAGATCGAGGTTCTCGAACGCCATCCACAGGTGGTGATGGCGTTTAGTGCCTATGGCCTGTACGCCGATGAGCAGA CGCTGAGCTTTGTCAGTCGGTTGGCCCCGGCCAGCTATGTGCGCGATGGGCGTGATGTCTTCACCGATTTTCTGCTTAAA GGGTATCCCCAGCATAGTGGCACCATGATCCGCAAGAGCGCATATCAGGCGATTGGTGGTTATGATCCAACGCTGCGCTG GTCGCTTGATGCTCAAATGTGGCTGGGATTATGCCATTTTGGGGATATTGCCTACATTGATGAGATGCTCTACGCCTATC GTCGGCATCCATCCAGCATGTCGAAGGATCCTACCGCGTTACGCAATGCCATTCTTGAACTATTTCGTATCTTTGACTGG ACATTCAGTCTGATGCCAGAAGAGGAACAACGTAAACGGCAGTGGTTATACCGTAAAGCACGCCAGCGTGCCCTGATTTC GTTTGCTGCTGATGCTGTATTCAGCGGGAATATTCCGTTGGGCTGGCAATTTTACAAGGTCGGTTTGCAGGTAAGCCCCT GGGAGACCTTGTTCCAAAAGGGATCGCTGGCAATTGCGTTACGTGCACTGCTTGGCGCCCGGCTCTATGATCGCTTGTTC CGTCGTCAGCCATCGGTTACTTCTGAGCAGACAATGGCATCGGCTTAA
Upstream 100 bases:
>100_bases TCCTGTTGCCCTTCTACCCGCAGATGACTGCGGATGAGCAGGAGTATGTGGTTGCGACGCTGGCAGCAGCCTGTACAGCG TAAACATCAGGGAGCTGGCA
Downstream 100 bases:
>100_bases CCGGGGATTGCTATGAATGTACGTGCGGTGGTTAGTAAAACTATCGATCAGGTTGGGAATGTGTTGTTAAGTCCACCGTA TGGTGGGTTTGGCTACTACT
Product: glycosyl transferase family 2 protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MTANHQVPLLSVTVLNYNYGHFLANCLDSILHQSFTDFEVILINDCSTDNSLEVIQPYLRDPRIRLVNHTQNKGFVASLI EGMALSRGTYLNVISADDWVVSPHAFARQIEVLERHPQVVMAFSAYGLYADEQTLSFVSRLAPASYVRDGRDVFTDFLLK GYPQHSGTMIRKSAYQAIGGYDPTLRWSLDAQMWLGLCHFGDIAYIDEMLYAYRRHPSSMSKDPTALRNAILELFRIFDW TFSLMPEEEQRKRQWLYRKARQRALISFAADAVFSGNIPLGWQFYKVGLQVSPWETLFQKGSLAIALRALLGARLYDRLF RRQPSVTSEQTMASA
Sequences:
>Translated_335_residues MTANHQVPLLSVTVLNYNYGHFLANCLDSILHQSFTDFEVILINDCSTDNSLEVIQPYLRDPRIRLVNHTQNKGFVASLI EGMALSRGTYLNVISADDWVVSPHAFARQIEVLERHPQVVMAFSAYGLYADEQTLSFVSRLAPASYVRDGRDVFTDFLLK GYPQHSGTMIRKSAYQAIGGYDPTLRWSLDAQMWLGLCHFGDIAYIDEMLYAYRRHPSSMSKDPTALRNAILELFRIFDW TFSLMPEEEQRKRQWLYRKARQRALISFAADAVFSGNIPLGWQFYKVGLQVSPWETLFQKGSLAIALRALLGARLYDRLF RRQPSVTSEQTMASA >Mature_334_residues TANHQVPLLSVTVLNYNYGHFLANCLDSILHQSFTDFEVILINDCSTDNSLEVIQPYLRDPRIRLVNHTQNKGFVASLIE GMALSRGTYLNVISADDWVVSPHAFARQIEVLERHPQVVMAFSAYGLYADEQTLSFVSRLAPASYVRDGRDVFTDFLLKG YPQHSGTMIRKSAYQAIGGYDPTLRWSLDAQMWLGLCHFGDIAYIDEMLYAYRRHPSSMSKDPTALRNAILELFRIFDWT FSLMPEEEQRKRQWLYRKARQRALISFAADAVFSGNIPLGWQFYKVGLQVSPWETLFQKGSLAIALRALLGARLYDRLFR RQPSVTSEQTMASA
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790044, Length=92, Percent_Identity=38.0434782608696, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 38312; Mature: 38181
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANHQVPLLSVTVLNYNYGHFLANCLDSILHQSFTDFEVILINDCSTDNSLEVIQPYLR CCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHC DPRIRLVNHTQNKGFVASLIEGMALSRGTYLNVISADDWVVSPHAFARQIEVLERHPQVV CCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCEECHHHHHHHHHHHHHCCCEE MAFSAYGLYADEQTLSFVSRLAPASYVRDGRDVFTDFLLKGYPQHSGTMIRKSAYQAIGG EEEHHHCCCCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC YDPTLRWSLDAQMWLGLCHFGDIAYIDEMLYAYRRHPSSMSKDPTALRNAILELFRIFDW CCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH TFSLMPEEEQRKRQWLYRKARQRALISFAADAVFSGNIPLGWQFYKVGLQVSPWETLFQK HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCEECHHHHHHHC GSLAIALRALLGARLYDRLFRRQPSVTSEQTMASA CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC >Mature Secondary Structure TANHQVPLLSVTVLNYNYGHFLANCLDSILHQSFTDFEVILINDCSTDNSLEVIQPYLR CCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHC DPRIRLVNHTQNKGFVASLIEGMALSRGTYLNVISADDWVVSPHAFARQIEVLERHPQVV CCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCEECHHHHHHHHHHHHHCCCEE MAFSAYGLYADEQTLSFVSRLAPASYVRDGRDVFTDFLLKGYPQHSGTMIRKSAYQAIGG EEEHHHCCCCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC YDPTLRWSLDAQMWLGLCHFGDIAYIDEMLYAYRRHPSSMSKDPTALRNAILELFRIFDW CCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH TFSLMPEEEQRKRQWLYRKARQRALISFAADAVFSGNIPLGWQFYKVGLQVSPWETLFQK HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCEECHHHHHHHC GSLAIALRALLGARLYDRLFRRQPSVTSEQTMASA CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]