| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is hemK [H]
Identifier: 222525022
GI number: 222525022
Start: 2219009
End: 2219860
Strand: Direct
Name: hemK [H]
Synonym: Chy400_1757
Alternate gene names: 222525022
Gene position: 2219009-2219860 (Clockwise)
Preceding gene: 222525021
Following gene: 222525023
Centisome position: 42.11
GC content: 57.86
Gene sequence:
>852_bases ATGACGATCCAACAAGCCATTCAGCACGCAATCACCCAATTGCGAACCATCTCGCCGACCGCCCGGCTTGACGCCGAACT CCTGCTTGCTCACATTCTCGGCTGGTCGCGGGCAAAAGTAGTTGCTGAACGGGATCATGTCCTGACGCCAGAGCAAGAGA TGGCCTTCAACGCCTTGATCGAACGTCGGGCCAACCGTGAGCCGGTTGCGTACCTCATCGGCCATCGCGAGTTCTTTGGC CTTGATCTGTTCGTTGACCGTCGCGTGCTCATCCCGCGCCCGGAAACCGAGTTGCTGGTCGAACTGACTCTCAAGGAAGC GCAACGCTTCAACCACACCCCACTGATCATTGCCGACATCGGCACCGGTAGCGGTGCTATTGCAATTGCACTGGCTATGC ACCTGCCGCACGCCCTGATCTACGGCGTTGACATCAGTCCTGATGCGCTGGCAGTAGCCGCCATCAACGTTACCCGCTAT CGACTCGACGACCGGATCAGGCTGCTTGAAGGTGATCTCTGCACGCCACTCCCCGCCCCGGTCGATATTCTGGTCAGCAA CCCACCATACACGATCCTGACTGAAATTGACGAGGGCGTCTATCGTCACGAACCACACCTTGCCCTCGATGGCGGCAGCG ATGGCCTCGACTGCTACCGACGCCTGATCGCTGCTGCTCCGACCTATCTCAAACCCAACGGGGCGATCTTGCTGGAAATC GGTTCAACCCAGGCTGCATCTGTGGTACACTTACTACGTCAGGCGTTGCCGATGGCAGAAACCGGTATAGAACGTGATCT GGCCGGTCACGACAGGATCGTTTGGGCACGTAATCGATATGTCATCCACTGA
Upstream 100 bases:
>100_bases TACTGTCGTTGGTGCCTGGCATGCGTTCATGCGCCAGTACGATGGTTGGGTAGCACGACAGCACAGCTTTCTGAGGTAAG TTCTAACCTACAACAACCTT
Downstream 100 bases:
>100_bases TCTGGCCCCTGGTTCTATCTTGTCGATATACTATGGGTAGAGATCAGGAGGATTGCTATGACTGCACTCTTTGTCGCCCT TGGCATCGCCATCATTACTC
Product: protein-(glutamine-N5) methyltransferase, release factor-specific
Products: NA
Alternate protein names: M.XfaHemK2P [H]
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MTIQQAIQHAITQLRTISPTARLDAELLLAHILGWSRAKVVAERDHVLTPEQEMAFNALIERRANREPVAYLIGHREFFG LDLFVDRRVLIPRPETELLVELTLKEAQRFNHTPLIIADIGTGSGAIAIALAMHLPHALIYGVDISPDALAVAAINVTRY RLDDRIRLLEGDLCTPLPAPVDILVSNPPYTILTEIDEGVYRHEPHLALDGGSDGLDCYRRLIAAAPTYLKPNGAILLEI GSTQAASVVHLLRQALPMAETGIERDLAGHDRIVWARNRYVIH
Sequences:
>Translated_283_residues MTIQQAIQHAITQLRTISPTARLDAELLLAHILGWSRAKVVAERDHVLTPEQEMAFNALIERRANREPVAYLIGHREFFG LDLFVDRRVLIPRPETELLVELTLKEAQRFNHTPLIIADIGTGSGAIAIALAMHLPHALIYGVDISPDALAVAAINVTRY RLDDRIRLLEGDLCTPLPAPVDILVSNPPYTILTEIDEGVYRHEPHLALDGGSDGLDCYRRLIAAAPTYLKPNGAILLEI GSTQAASVVHLLRQALPMAETGIERDLAGHDRIVWARNRYVIH >Mature_282_residues TIQQAIQHAITQLRTISPTARLDAELLLAHILGWSRAKVVAERDHVLTPEQEMAFNALIERRANREPVAYLIGHREFFGL DLFVDRRVLIPRPETELLVELTLKEAQRFNHTPLIIADIGTGSGAIAIALAMHLPHALIYGVDISPDALAVAAINVTRYR LDDRIRLLEGDLCTPLPAPVDILVSNPPYTILTEIDEGVYRHEPHLALDGGSDGLDCYRRLIAAAPTYLKPNGAILLEIG STQAASVVHLLRQALPMAETGIERDLAGHDRIVWARNRYVIH
Specific function: Probable protein methyltransferase. May methylate a Gln residue in target proteins [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=278, Percent_Identity=35.6115107913669, Blast_Score=127, Evalue=1e-29, Organism=Escherichia coli, GI1787463, Length=283, Percent_Identity=37.1024734982332, Blast_Score=142, Evalue=2e-35, Organism=Escherichia coli, GI87082085, Length=246, Percent_Identity=36.9918699186992, Blast_Score=132, Evalue=3e-32, Organism=Saccharomyces cerevisiae, GI6324266, Length=249, Percent_Identity=26.9076305220884, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24582226, Length=271, Percent_Identity=28.0442804428044, Blast_Score=102, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 31382; Mature: 31251
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIQQAIQHAITQLRTISPTARLDAELLLAHILGWSRAKVVAERDHVLTPEQEMAFNALI CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHEEECCCCCCCCHHHHHHHHHH ERRANREPVAYLIGHREFFGLDLFVDRRVLIPRPETELLVELTLKEAQRFNHTPLIIADI HHHCCCCCEEEEECCHHHCCEEEEECCEEECCCCCHHHHEEEEHHHHHHCCCCCEEEEEC GTGSGAIAIALAMHLPHALIYGVDISPDALAVAAINVTRYRLDDRIRLLEGDLCTPLPAP CCCCCHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEEEEEECCCCEEEECCCCCCCCCCC VDILVSNPPYTILTEIDEGVYRHEPHLALDGGSDGLDCYRRLIAAAPTYLKPNGAILLEI EEEEECCCCEEEEEECCCCHHHCCCCEEECCCCCCHHHHHHHHHCCCCEECCCCEEEEEE GSTQAASVVHLLRQALPMAETGIERDLAGHDRIVWARNRYVIH CCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEECCCEEEC >Mature Secondary Structure TIQQAIQHAITQLRTISPTARLDAELLLAHILGWSRAKVVAERDHVLTPEQEMAFNALI CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHEEECCCCCCCCHHHHHHHHHH ERRANREPVAYLIGHREFFGLDLFVDRRVLIPRPETELLVELTLKEAQRFNHTPLIIADI HHHCCCCCEEEEECCHHHCCEEEEECCEEECCCCCHHHHEEEEHHHHHHCCCCCEEEEEC GTGSGAIAIALAMHLPHALIYGVDISPDALAVAAINVTRYRLDDRIRLLEGDLCTPLPAP CCCCCHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEEEEEECCCCEEEECCCCCCCCCCC VDILVSNPPYTILTEIDEGVYRHEPHLALDGGSDGLDCYRRLIAAAPTYLKPNGAILLEI EEEEECCCCEEEEEECCCCHHHCCCCEEECCCCCCHHHHHHHHHCCCCEECCCCEEEEEE GSTQAASVVHLLRQALPMAETGIERDLAGHDRIVWARNRYVIH CCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]