| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is htpX1 [H]
Identifier: 222525013
GI number: 222525013
Start: 2208876
End: 2209769
Strand: Direct
Name: htpX1 [H]
Synonym: Chy400_1748
Alternate gene names: 222525013
Gene position: 2208876-2209769 (Clockwise)
Preceding gene: 222525012
Following gene: 222525014
Centisome position: 41.92
GC content: 57.61
Gene sequence:
>894_bases GTGACAATGCTGGTAAATAGTTTGAAGACCGTTGGTTTGCTTGGACTGCTCACCGGTCTCTTCATCATGATTGGTGGTGC AATTGGTGGTCAGATTGGGATGATCATCGCGCTCGTTCTGGCTGTCGTGATGAATATGGGTGCCTGGTGGTTCTCCGACA AACTGGCACTCAAGATGAGCGGTGCGCAGGAAGTGACACCCGATCAGGCACCTGAGCTTCATGCGATGGTGGAAGAGCTA TCACGGCGGGCTGGTATTCCCAAACCGCGCGTGTACATCATCGAAACTGACGCTCCCAACGCCTTTGCTACCGGTCGTGA TCCGGCGCACGGCGCAGTAGCCGTAACCACCGGGATTGCACGCCTGCTCACACGCGAGGAGCTGGCCGGCGTCATCGCAC ACGAGCTGGCACACATCAAGCATCGTGACACCCTGATCTCATCCATCGCAGCCACTATTGCCGGTGCTATCGGTATGCTG GCCGATATGGTGATGTGGAGCATGATCTTCGCCGGTTTCGGTGGTAATGATGAAGAAGAAGGTGGTGGCGTTGCCGGACT GGTTGGTGGCATCCTGACGGCCATGCTGGCACCAATTATGGCCCTTATCATTCAGATGGCAATTTCGCGTTCGCGTGAGT ACATGGCAGATGCCGGCGGCGCGCAGATTCTCGGCAATCCATTGCCGTTAGCCAGTGCCCTTGAGAAGCTGGAATGGGCT GCTGGGCGGATGCCAATGGATGAAGCACGTCCGGCGACGGCACACATGTACATTGTCAATCCGGTGCTGGGTGGCCTGGC CAGCCTCTTCCGCACCCACCCCGAAACCCACAAGCGTATCTCGCGCCTGCGTGCGATGGCCAATCGCAGTGGTAACACAG CGATGGCGGCGTAA
Upstream 100 bases:
>100_bases AGGAGAGGCCCCCCCTTTGGTAGAACGTTGCGATGCAATATACTGGCAGTGCGAAAACGACATCCTGTGCAGGATCGTAG TATAAAGTGGAGGAACTGCC
Downstream 100 bases:
>100_bases GTCACATCTGCGCAGCGCGTTGACATAGATTTCCTCCCTATTCCAGGCATCACTCAATGGCGAGTGGTGCCCTTTTTGCG GTAGAATACTCTTGTCTGGA
Product: peptidase M48 Ste24p
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MTMLVNSLKTVGLLGLLTGLFIMIGGAIGGQIGMIIALVLAVVMNMGAWWFSDKLALKMSGAQEVTPDQAPELHAMVEEL SRRAGIPKPRVYIIETDAPNAFATGRDPAHGAVAVTTGIARLLTREELAGVIAHELAHIKHRDTLISSIAATIAGAIGML ADMVMWSMIFAGFGGNDEEEGGGVAGLVGGILTAMLAPIMALIIQMAISRSREYMADAGGAQILGNPLPLASALEKLEWA AGRMPMDEARPATAHMYIVNPVLGGLASLFRTHPETHKRISRLRAMANRSGNTAMAA
Sequences:
>Translated_297_residues MTMLVNSLKTVGLLGLLTGLFIMIGGAIGGQIGMIIALVLAVVMNMGAWWFSDKLALKMSGAQEVTPDQAPELHAMVEEL SRRAGIPKPRVYIIETDAPNAFATGRDPAHGAVAVTTGIARLLTREELAGVIAHELAHIKHRDTLISSIAATIAGAIGML ADMVMWSMIFAGFGGNDEEEGGGVAGLVGGILTAMLAPIMALIIQMAISRSREYMADAGGAQILGNPLPLASALEKLEWA AGRMPMDEARPATAHMYIVNPVLGGLASLFRTHPETHKRISRLRAMANRSGNTAMAA >Mature_296_residues TMLVNSLKTVGLLGLLTGLFIMIGGAIGGQIGMIIALVLAVVMNMGAWWFSDKLALKMSGAQEVTPDQAPELHAMVEELS RRAGIPKPRVYIIETDAPNAFATGRDPAHGAVAVTTGIARLLTREELAGVIAHELAHIKHRDTLISSIAATIAGAIGMLA DMVMWSMIFAGFGGNDEEEGGGVAGLVGGILTAMLAPIMALIIQMAISRSREYMADAGGAQILGNPLPLASALEKLEWAA GRMPMDEARPATAHMYIVNPVLGGLASLFRTHPETHKRISRLRAMANRSGNTAMAA
Specific function: Unknown Function. Overexpression Of A Truncated Form Of The Htpx Protein Leads To An Increase In The Degradation Of Abnormal Proteins. [C]
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M48B family [H]
Homologues:
Organism=Escherichia coli, GI1788133, Length=291, Percent_Identity=31.2714776632302, Blast_Score=92, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022919 - InterPro: IPR001915 [H]
Pfam domain/function: PF01435 Peptidase_M48 [H]
EC number: 3.4.24.-
Molecular weight: Translated: 31240; Mature: 31109
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.8 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMLVNSLKTVGLLGLLTGLFIMIGGAIGGQIGMIIALVLAVVMNMGAWWFSDKLALKMS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEEC GAQEVTPDQAPELHAMVEELSRRAGIPKPRVYIIETDAPNAFATGRDPAHGAVAVTTGIA CCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH RLLTREELAGVIAHELAHIKHRDTLISSIAATIAGAIGMLADMVMWSMIFAGFGGNDEEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GGGVAGLVGGILTAMLAPIMALIIQMAISRSREYMADAGGAQILGNPLPLASALEKLEWA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHH AGRMPMDEARPATAHMYIVNPVLGGLASLFRTHPETHKRISRLRAMANRSGNTAMAA HCCCCHHHCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TMLVNSLKTVGLLGLLTGLFIMIGGAIGGQIGMIIALVLAVVMNMGAWWFSDKLALKMS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEEC GAQEVTPDQAPELHAMVEELSRRAGIPKPRVYIIETDAPNAFATGRDPAHGAVAVTTGIA CCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH RLLTREELAGVIAHELAHIKHRDTLISSIAATIAGAIGMLADMVMWSMIFAGFGGNDEEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GGGVAGLVGGILTAMLAPIMALIIQMAISRSREYMADAGGAQILGNPLPLASALEKLEWA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHH AGRMPMDEARPATAHMYIVNPVLGGLASLFRTHPETHKRISRLRAMANRSGNTAMAA HCCCCHHHCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]