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The map label for this gene is ykwD [H]

Identifier: 222524963

GI number: 222524963

Start: 2144967

End: 2145767

Strand: Direct

Name: ykwD [H]

Synonym: Chy400_1698

Alternate gene names: 222524963

Gene position: 2144967-2145767 (Clockwise)

Preceding gene: 222524962

Following gene: 222524964

Centisome position: 40.71

GC content: 58.18

Gene sequence:

>801_bases
ATGCTGATCCGCTCTTGGCGCCTGCTATGCGGCACGATCTGTCTCGGCCTCTTGATCATCGCCACCTTGCCCCGCCTGCC
TGCACCTCCACTCCTTGCCCAATCCGACCCGATGCAACAGGTGATCGAGCTGACCAACCAGATACGGATGGCCAACGGTC
TATCGCCACTCAAGCGGAACGATAACCTGCAACAGGCAGCGGTGTTCATCGTCGAAGACAACGCCAGTCGCAACCTCCTC
TCACACACCGATGTCCAGGGACGAAGTATGGGTCAGCGCTTTATCGCCTTTGGCTACAACTACTCCATAGCGGCTGAAAA
CCTGGCGGCAGGGTATGGTTCCCCGGACGCTGTAATCAATGGCTGGATGAACAGCGATGGTCATCGGGCAAATATTCTGC
GGAACGGCCTGTGCGAGATGGGTGCCGGTTACACCTACCGCAGTGGGACAACCTACGGCCATTTCTGGTCGCAGACCTTC
GGCTGCCGCTGGAATACCTATCCGGTGGTGATCAACGGCGAAGCGGCGACCACCACCTCATCAACGGTGCAACTGTACAT
CTACGGGGCAGGATGGGCCGAACAGATGCGATTGAGCAATGATGGTGTGACCTGGACGGCGTGGCAGCCGTACAGCACCA
CCTACACCTGGACGTTAGCCAGCGGCAGCGGTGAACGCACCGTCTTCGTGCAGATCCGCCAGGGTGCGACAACCTACCAG
GCGAGTGATACGATTGTGGTGCAGCAGGCCAGTAGCTCACCAACAGGGATACAAGTGCATATTCCACTGGTGGTACGATA
A

Upstream 100 bases:

>100_bases
CGCAAACAGCTCAGGAGATACGGCTCCCCATCCTGAGAAATCTCCCCCCAGAGTGCGGATCTCCGACAGCCATACCACAC
ATTGATGAGGTGATCAACAT

Downstream 100 bases:

>100_bases
ATCATCTGCGGAGCAGGATACGCAATCTATACGGCGATTAACCGGCCGTTGTTGGATTTGGTCGTATCCTGCTCTGTGTT
ATGAGAAGCTATTTCAAGCT

Product: SCP-like extracellular

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MLIRSWRLLCGTICLGLLIIATLPRLPAPPLLAQSDPMQQVIELTNQIRMANGLSPLKRNDNLQQAAVFIVEDNASRNLL
SHTDVQGRSMGQRFIAFGYNYSIAAENLAAGYGSPDAVINGWMNSDGHRANILRNGLCEMGAGYTYRSGTTYGHFWSQTF
GCRWNTYPVVINGEAATTTSSTVQLYIYGAGWAEQMRLSNDGVTWTAWQPYSTTYTWTLASGSGERTVFVQIRQGATTYQ
ASDTIVVQQASSSPTGIQVHIPLVVR

Sequences:

>Translated_266_residues
MLIRSWRLLCGTICLGLLIIATLPRLPAPPLLAQSDPMQQVIELTNQIRMANGLSPLKRNDNLQQAAVFIVEDNASRNLL
SHTDVQGRSMGQRFIAFGYNYSIAAENLAAGYGSPDAVINGWMNSDGHRANILRNGLCEMGAGYTYRSGTTYGHFWSQTF
GCRWNTYPVVINGEAATTTSSTVQLYIYGAGWAEQMRLSNDGVTWTAWQPYSTTYTWTLASGSGERTVFVQIRQGATTYQ
ASDTIVVQQASSSPTGIQVHIPLVVR
>Mature_266_residues
MLIRSWRLLCGTICLGLLIIATLPRLPAPPLLAQSDPMQQVIELTNQIRMANGLSPLKRNDNLQQAAVFIVEDNASRNLL
SHTDVQGRSMGQRFIAFGYNYSIAAENLAAGYGSPDAVINGWMNSDGHRANILRNGLCEMGAGYTYRSGTTYGHFWSQTF
GCRWNTYPVVINGEAATTTSSTVQLYIYGAGWAEQMRLSNDGVTWTAWQPYSTTYTWTLASGSGERTVFVQIRQGATTYQ
ASDTIVVQQASSSPTGIQVHIPLVVR

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 29209; Mature: 29209

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIRSWRLLCGTICLGLLIIATLPRLPAPPLLAQSDPMQQVIELTNQIRMANGLSPLKRN
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCC
DNLQQAAVFIVEDNASRNLLSHTDVQGRSMGQRFIAFGYNYSIAAENLAAGYGSPDAVIN
CCCCCEEEEEEECCCCCCCHHCCCCCCHHCCCEEEEEECCEEEEHHHHHCCCCCCHHEEE
GWMNSDGHRANILRNGLCEMGAGYTYRSGTTYGHFWSQTFGCRWNTYPVVINGEAATTTS
CCCCCCCCCHHHHHHHHHHHCCCEEECCCCCEEEHHCCCCCCEECCEEEEEECCCCCCCC
STVQLYIYGAGWAEQMRLSNDGVTWTAWQPYSTTYTWTLASGSGERTVFVQIRQGATTYQ
CEEEEEEEECCHHHHEEECCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEEECCCEEEE
ASDTIVVQQASSSPTGIQVHIPLVVR
CCCEEEEEECCCCCCEEEEEEEEEEC
>Mature Secondary Structure
MLIRSWRLLCGTICLGLLIIATLPRLPAPPLLAQSDPMQQVIELTNQIRMANGLSPLKRN
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCC
DNLQQAAVFIVEDNASRNLLSHTDVQGRSMGQRFIAFGYNYSIAAENLAAGYGSPDAVIN
CCCCCEEEEEEECCCCCCCHHCCCCCCHHCCCEEEEEECCEEEEHHHHHCCCCCCHHEEE
GWMNSDGHRANILRNGLCEMGAGYTYRSGTTYGHFWSQTFGCRWNTYPVVINGEAATTTS
CCCCCCCCCHHHHHHHHHHHCCCEEECCCCCEEEHHCCCCCCEECCEEEEEECCCCCCCC
STVQLYIYGAGWAEQMRLSNDGVTWTAWQPYSTTYTWTLASGSGERTVFVQIRQGATTYQ
CEEEEEEEECCHHHHEEECCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEEECCCEEEE
ASDTIVVQQASSSPTGIQVHIPLVVR
CCCEEEEEECCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]