| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524948
Identifier: 222524948
GI number: 222524948
Start: 2125505
End: 2126758
Strand: Direct
Name: 222524948
Synonym: Chy400_1683
Alternate gene names: NA
Gene position: 2125505-2126758 (Clockwise)
Preceding gene: 222524947
Following gene: 222524950
Centisome position: 40.34
GC content: 59.73
Gene sequence:
>1254_bases ATGAACGCCGATCAACGCTACCTCGCAACAATCGGCATGCTGACCGCCGGCCTGACGGTAGGATGGTTATTTGCGACCAT CGCGTATGCCGATCTTGGCTATACCACCTATCGGCTCTCCATACCGTTTGCAGGTGATCTGGCCTTGATCGGTTTACTCA ACAGTGTATCGGTGCTGGCCGGTGGATTGATCAGCCCCTTTCTGTGGCAGCTTGTGCGGCAGATAGGAGCGCGACCGGCA ATGATCGGCGGTTGCCTGCTGCACGGCCTGGCACTGCTGGGATTATCACTCGCACCACCGGCATCAGCCCTCTCCCCATT GACGGCGTGGCTGTTACTGGGATGCGTGGCCCTAAGCGGCCCAGCCAGTGTCTTATTTACGTTGGCCGGGCCACCACTCA TGATGCAACTGAGTGGCGCTAACGGCCCTGATCGTCTGTTTGCTCGCAGCGCCGCACTCAGTCTGATCATCAATGGTCTC GGTAGTCTGCTAAGCGGATCACTGACAACGGTGTGGCGACTCTTGCCGGTTGAAGGCGATGCGCTGACCGCCTATCGGCT GAACGCCGTATCAGGTGTTGTCCTGGTGATGCTGGCCGGAGTGCCGCTCCTGGGTTTGCCGGTACGTCCTCCACCAACAG TCCCCACCGGTACCAGGCGCAGCCAGATAAGCGACCTCTGGCAGGCCATTCGATATGGCCTGGCGTTCGTACCAGGGCCA TTGCTAATCTCCCTGGGTGCAGCCCTCTTCATACCCTACCTGGGCTTGTTTTTCCGCCAGCGTTTCACCGCCAGCGATGC CATGATCGGCCTGATCCTGGCACTAATCAGTCTGGCTACCGGTCTGGCAACACTGGCAGGCCCGTACCTGGCAAAGCGGG TAGGCAGGATGTCCGGGGTGGTACTCACACAAGCGCTGGCGATACCGTGCCTGATCGCGCTGGCCTTCGCACCATCGCTA CCGGTGGCCGCAGCAATAGCGATGGTGCGTGGCATGTTGATGAATATGGCAACGCCACTGTTTGATGCACAGGCGCTCGC CCAGGCCCCGGCCCATCACCACCCCACCATCATCGGCATGATCCGGGCAGCAGCGACAGTTGGCTACATTGCCGGCCCGA CGATAAGCGCCGAATTGCAAAGCAGCGCCGGGTTTGCTCCTATTTTCCTCATTGCCGCGCTCTGTTACACGGCGGCGGTG GTAGTTAATGCTGTCATCTTCGTGATCGGGAAGAGTAAGCAGGCGACCTTGTGA
Upstream 100 bases:
>100_bases TCTATACCGACTACACCACGCAGAGGCGCGTGTGGAAGCGCAGCGCATTTGTCTACCGTGACATTATCGCTCGCAATGGT CTGTTCGGTAACGAGTCGTC
Downstream 100 bases:
>100_bases TGCACAAGGTGATCGTGGGGAGAGGGAGGGTTGGCGTGCCTGTGCCTCTCACACCGTTCTACGCATCACCTGTTACCGGC ACCACAGTGACACCAATCAC
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: Facilitator Transporter; Permease; MFS Transporter; Permease Of Facilitator Superfamily
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MNADQRYLATIGMLTAGLTVGWLFATIAYADLGYTTYRLSIPFAGDLALIGLLNSVSVLAGGLISPFLWQLVRQIGARPA MIGGCLLHGLALLGLSLAPPASALSPLTAWLLLGCVALSGPASVLFTLAGPPLMMQLSGANGPDRLFARSAALSLIINGL GSLLSGSLTTVWRLLPVEGDALTAYRLNAVSGVVLVMLAGVPLLGLPVRPPPTVPTGTRRSQISDLWQAIRYGLAFVPGP LLISLGAALFIPYLGLFFRQRFTASDAMIGLILALISLATGLATLAGPYLAKRVGRMSGVVLTQALAIPCLIALAFAPSL PVAAAIAMVRGMLMNMATPLFDAQALAQAPAHHHPTIIGMIRAAATVGYIAGPTISAELQSSAGFAPIFLIAALCYTAAV VVNAVIFVIGKSKQATL
Sequences:
>Translated_417_residues MNADQRYLATIGMLTAGLTVGWLFATIAYADLGYTTYRLSIPFAGDLALIGLLNSVSVLAGGLISPFLWQLVRQIGARPA MIGGCLLHGLALLGLSLAPPASALSPLTAWLLLGCVALSGPASVLFTLAGPPLMMQLSGANGPDRLFARSAALSLIINGL GSLLSGSLTTVWRLLPVEGDALTAYRLNAVSGVVLVMLAGVPLLGLPVRPPPTVPTGTRRSQISDLWQAIRYGLAFVPGP LLISLGAALFIPYLGLFFRQRFTASDAMIGLILALISLATGLATLAGPYLAKRVGRMSGVVLTQALAIPCLIALAFAPSL PVAAAIAMVRGMLMNMATPLFDAQALAQAPAHHHPTIIGMIRAAATVGYIAGPTISAELQSSAGFAPIFLIAALCYTAAV VVNAVIFVIGKSKQATL >Mature_417_residues MNADQRYLATIGMLTAGLTVGWLFATIAYADLGYTTYRLSIPFAGDLALIGLLNSVSVLAGGLISPFLWQLVRQIGARPA MIGGCLLHGLALLGLSLAPPASALSPLTAWLLLGCVALSGPASVLFTLAGPPLMMQLSGANGPDRLFARSAALSLIINGL GSLLSGSLTTVWRLLPVEGDALTAYRLNAVSGVVLVMLAGVPLLGLPVRPPPTVPTGTRRSQISDLWQAIRYGLAFVPGP LLISLGAALFIPYLGLFFRQRFTASDAMIGLILALISLATGLATLAGPYLAKRVGRMSGVVLTQALAIPCLIALAFAPSL PVAAAIAMVRGMLMNMATPLFDAQALAQAPAHHHPTIIGMIRAAATVGYIAGPTISAELQSSAGFAPIFLIAALCYTAAV VVNAVIFVIGKSKQATL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43010; Mature: 43010
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNADQRYLATIGMLTAGLTVGWLFATIAYADLGYTTYRLSIPFAGDLALIGLLNSVSVLA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHH GGLISPFLWQLVRQIGARPAMIGGCLLHGLALLGLSLAPPASALSPLTAWLLLGCVALSG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC PASVLFTLAGPPLMMQLSGANGPDRLFARSAALSLIINGLGSLLSGSLTTVWRLLPVEGD HHHEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC ALTAYRLNAVSGVVLVMLAGVPLLGLPVRPPPTVPTGTRRSQISDLWQAIRYGLAFVPGP EEHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHH LLISLGAALFIPYLGLFFRQRFTASDAMIGLILALISLATGLATLAGPYLAKRVGRMSGV HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLTQALAIPCLIALAFAPSLPVAAAIAMVRGMLMNMATPLFDAQALAQAPAHHHPTIIGM HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHH IRAAATVGYIAGPTISAELQSSAGFAPIFLIAALCYTAAVVVNAVIFVIGKSKQATL HHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNADQRYLATIGMLTAGLTVGWLFATIAYADLGYTTYRLSIPFAGDLALIGLLNSVSVLA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHH GGLISPFLWQLVRQIGARPAMIGGCLLHGLALLGLSLAPPASALSPLTAWLLLGCVALSG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC PASVLFTLAGPPLMMQLSGANGPDRLFARSAALSLIINGLGSLLSGSLTTVWRLLPVEGD HHHEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC ALTAYRLNAVSGVVLVMLAGVPLLGLPVRPPPTVPTGTRRSQISDLWQAIRYGLAFVPGP EEHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHH LLISLGAALFIPYLGLFFRQRFTASDAMIGLILALISLATGLATLAGPYLAKRVGRMSGV HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLTQALAIPCLIALAFAPSLPVAAAIAMVRGMLMNMATPLFDAQALAQAPAHHHPTIIGM HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHH IRAAATVGYIAGPTISAELQSSAGFAPIFLIAALCYTAAVVVNAVIFVIGKSKQATL HHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA