Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222524948

Identifier: 222524948

GI number: 222524948

Start: 2125505

End: 2126758

Strand: Direct

Name: 222524948

Synonym: Chy400_1683

Alternate gene names: NA

Gene position: 2125505-2126758 (Clockwise)

Preceding gene: 222524947

Following gene: 222524950

Centisome position: 40.34

GC content: 59.73

Gene sequence:

>1254_bases
ATGAACGCCGATCAACGCTACCTCGCAACAATCGGCATGCTGACCGCCGGCCTGACGGTAGGATGGTTATTTGCGACCAT
CGCGTATGCCGATCTTGGCTATACCACCTATCGGCTCTCCATACCGTTTGCAGGTGATCTGGCCTTGATCGGTTTACTCA
ACAGTGTATCGGTGCTGGCCGGTGGATTGATCAGCCCCTTTCTGTGGCAGCTTGTGCGGCAGATAGGAGCGCGACCGGCA
ATGATCGGCGGTTGCCTGCTGCACGGCCTGGCACTGCTGGGATTATCACTCGCACCACCGGCATCAGCCCTCTCCCCATT
GACGGCGTGGCTGTTACTGGGATGCGTGGCCCTAAGCGGCCCAGCCAGTGTCTTATTTACGTTGGCCGGGCCACCACTCA
TGATGCAACTGAGTGGCGCTAACGGCCCTGATCGTCTGTTTGCTCGCAGCGCCGCACTCAGTCTGATCATCAATGGTCTC
GGTAGTCTGCTAAGCGGATCACTGACAACGGTGTGGCGACTCTTGCCGGTTGAAGGCGATGCGCTGACCGCCTATCGGCT
GAACGCCGTATCAGGTGTTGTCCTGGTGATGCTGGCCGGAGTGCCGCTCCTGGGTTTGCCGGTACGTCCTCCACCAACAG
TCCCCACCGGTACCAGGCGCAGCCAGATAAGCGACCTCTGGCAGGCCATTCGATATGGCCTGGCGTTCGTACCAGGGCCA
TTGCTAATCTCCCTGGGTGCAGCCCTCTTCATACCCTACCTGGGCTTGTTTTTCCGCCAGCGTTTCACCGCCAGCGATGC
CATGATCGGCCTGATCCTGGCACTAATCAGTCTGGCTACCGGTCTGGCAACACTGGCAGGCCCGTACCTGGCAAAGCGGG
TAGGCAGGATGTCCGGGGTGGTACTCACACAAGCGCTGGCGATACCGTGCCTGATCGCGCTGGCCTTCGCACCATCGCTA
CCGGTGGCCGCAGCAATAGCGATGGTGCGTGGCATGTTGATGAATATGGCAACGCCACTGTTTGATGCACAGGCGCTCGC
CCAGGCCCCGGCCCATCACCACCCCACCATCATCGGCATGATCCGGGCAGCAGCGACAGTTGGCTACATTGCCGGCCCGA
CGATAAGCGCCGAATTGCAAAGCAGCGCCGGGTTTGCTCCTATTTTCCTCATTGCCGCGCTCTGTTACACGGCGGCGGTG
GTAGTTAATGCTGTCATCTTCGTGATCGGGAAGAGTAAGCAGGCGACCTTGTGA

Upstream 100 bases:

>100_bases
TCTATACCGACTACACCACGCAGAGGCGCGTGTGGAAGCGCAGCGCATTTGTCTACCGTGACATTATCGCTCGCAATGGT
CTGTTCGGTAACGAGTCGTC

Downstream 100 bases:

>100_bases
TGCACAAGGTGATCGTGGGGAGAGGGAGGGTTGGCGTGCCTGTGCCTCTCACACCGTTCTACGCATCACCTGTTACCGGC
ACCACAGTGACACCAATCAC

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: Facilitator Transporter; Permease; MFS Transporter; Permease Of Facilitator Superfamily

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MNADQRYLATIGMLTAGLTVGWLFATIAYADLGYTTYRLSIPFAGDLALIGLLNSVSVLAGGLISPFLWQLVRQIGARPA
MIGGCLLHGLALLGLSLAPPASALSPLTAWLLLGCVALSGPASVLFTLAGPPLMMQLSGANGPDRLFARSAALSLIINGL
GSLLSGSLTTVWRLLPVEGDALTAYRLNAVSGVVLVMLAGVPLLGLPVRPPPTVPTGTRRSQISDLWQAIRYGLAFVPGP
LLISLGAALFIPYLGLFFRQRFTASDAMIGLILALISLATGLATLAGPYLAKRVGRMSGVVLTQALAIPCLIALAFAPSL
PVAAAIAMVRGMLMNMATPLFDAQALAQAPAHHHPTIIGMIRAAATVGYIAGPTISAELQSSAGFAPIFLIAALCYTAAV
VVNAVIFVIGKSKQATL

Sequences:

>Translated_417_residues
MNADQRYLATIGMLTAGLTVGWLFATIAYADLGYTTYRLSIPFAGDLALIGLLNSVSVLAGGLISPFLWQLVRQIGARPA
MIGGCLLHGLALLGLSLAPPASALSPLTAWLLLGCVALSGPASVLFTLAGPPLMMQLSGANGPDRLFARSAALSLIINGL
GSLLSGSLTTVWRLLPVEGDALTAYRLNAVSGVVLVMLAGVPLLGLPVRPPPTVPTGTRRSQISDLWQAIRYGLAFVPGP
LLISLGAALFIPYLGLFFRQRFTASDAMIGLILALISLATGLATLAGPYLAKRVGRMSGVVLTQALAIPCLIALAFAPSL
PVAAAIAMVRGMLMNMATPLFDAQALAQAPAHHHPTIIGMIRAAATVGYIAGPTISAELQSSAGFAPIFLIAALCYTAAV
VVNAVIFVIGKSKQATL
>Mature_417_residues
MNADQRYLATIGMLTAGLTVGWLFATIAYADLGYTTYRLSIPFAGDLALIGLLNSVSVLAGGLISPFLWQLVRQIGARPA
MIGGCLLHGLALLGLSLAPPASALSPLTAWLLLGCVALSGPASVLFTLAGPPLMMQLSGANGPDRLFARSAALSLIINGL
GSLLSGSLTTVWRLLPVEGDALTAYRLNAVSGVVLVMLAGVPLLGLPVRPPPTVPTGTRRSQISDLWQAIRYGLAFVPGP
LLISLGAALFIPYLGLFFRQRFTASDAMIGLILALISLATGLATLAGPYLAKRVGRMSGVVLTQALAIPCLIALAFAPSL
PVAAAIAMVRGMLMNMATPLFDAQALAQAPAHHHPTIIGMIRAAATVGYIAGPTISAELQSSAGFAPIFLIAALCYTAAV
VVNAVIFVIGKSKQATL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43010; Mature: 43010

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNADQRYLATIGMLTAGLTVGWLFATIAYADLGYTTYRLSIPFAGDLALIGLLNSVSVLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHH
GGLISPFLWQLVRQIGARPAMIGGCLLHGLALLGLSLAPPASALSPLTAWLLLGCVALSG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
PASVLFTLAGPPLMMQLSGANGPDRLFARSAALSLIINGLGSLLSGSLTTVWRLLPVEGD
HHHEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
ALTAYRLNAVSGVVLVMLAGVPLLGLPVRPPPTVPTGTRRSQISDLWQAIRYGLAFVPGP
EEHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHH
LLISLGAALFIPYLGLFFRQRFTASDAMIGLILALISLATGLATLAGPYLAKRVGRMSGV
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLTQALAIPCLIALAFAPSLPVAAAIAMVRGMLMNMATPLFDAQALAQAPAHHHPTIIGM
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHH
IRAAATVGYIAGPTISAELQSSAGFAPIFLIAALCYTAAVVVNAVIFVIGKSKQATL
HHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNADQRYLATIGMLTAGLTVGWLFATIAYADLGYTTYRLSIPFAGDLALIGLLNSVSVLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHH
GGLISPFLWQLVRQIGARPAMIGGCLLHGLALLGLSLAPPASALSPLTAWLLLGCVALSG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
PASVLFTLAGPPLMMQLSGANGPDRLFARSAALSLIINGLGSLLSGSLTTVWRLLPVEGD
HHHEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
ALTAYRLNAVSGVVLVMLAGVPLLGLPVRPPPTVPTGTRRSQISDLWQAIRYGLAFVPGP
EEHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHH
LLISLGAALFIPYLGLFFRQRFTASDAMIGLILALISLATGLATLAGPYLAKRVGRMSGV
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLTQALAIPCLIALAFAPSLPVAAAIAMVRGMLMNMATPLFDAQALAQAPAHHHPTIIGM
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHH
IRAAATVGYIAGPTISAELQSSAGFAPIFLIAALCYTAAVVVNAVIFVIGKSKQATL
HHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA