| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222524918
Identifier: 222524918
GI number: 222524918
Start: 2083517
End: 2084110
Strand: Direct
Name: 222524918
Synonym: Chy400_1652
Alternate gene names: NA
Gene position: 2083517-2084110 (Clockwise)
Preceding gene: 222524916
Following gene: 222524919
Centisome position: 39.54
GC content: 54.38
Gene sequence:
>594_bases ATGACTCAATCTCAACCCAACCGCTTTATGCCGGCACCACTTGATGAATATGCGGTCAAGATTACGTATGGCCTGGCGTA TCTTGGTGGGTTGCTGGTACTACCACAGTTTTTTGCCTACCTTGCCAATATCCGTTGGAACGGCTTACAGATACCATTGG GACTGGCAGCCGCGCTGGCACTCTTCCTCTTGCTGAGTTATGCCTTTCAGCCACGGGCGTACCGGATTGATGCCAACGCA CTGGTTATCGAACGTCGCTGGGTACCGGCAATGATTATCCCGTTCGATCAGATCAGCGGGGTCTCGCTGGCTACTGGCTT AGCAGATATGCCACGCTTCGGATTGCGTTTTGCGTTCAACCCTGGCGTCTTCGGGTATCAGGGACCGTTTCGGCTTGATC CATACGGGCAAGTCGCCCTCTTTGCCACCAATCGCCATCGGCTGGTTGCCATCGCCCGCTATGATGCTTCGGTTGTGATC ATCAGCCCTGATCGACCACGAGATTTCATTGCTGCCCTGAATGAGCAGCGGCTCGTAGCTGCAACCCGCCAGATGGAAGA GCGGGATGTTTCGGAGGTACAGAATGCGGTTTAA
Upstream 100 bases:
>100_bases AGGTATCATGAACTGAACCGGAAATCCACCAGACCCGTTACGACAGAGACTTCGCGCTATAATGAAGTAACGTTACCAAT GCAAAGCAAAGGAAGGTAGC
Downstream 100 bases:
>100_bases GGCGCTGGATCGGCTCTATTTGCGCTGTCGTTACGACCAGTTTATTCCAGGGGCATTGCACGAAGACGGTCGGCGCTACT TACCGCAGATTGTGGTGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MTQSQPNRFMPAPLDEYAVKITYGLAYLGGLLVLPQFFAYLANIRWNGLQIPLGLAAALALFLLLSYAFQPRAYRIDANA LVIERRWVPAMIIPFDQISGVSLATGLADMPRFGLRFAFNPGVFGYQGPFRLDPYGQVALFATNRHRLVAIARYDASVVI ISPDRPRDFIAALNEQRLVAATRQMEERDVSEVQNAV
Sequences:
>Translated_197_residues MTQSQPNRFMPAPLDEYAVKITYGLAYLGGLLVLPQFFAYLANIRWNGLQIPLGLAAALALFLLLSYAFQPRAYRIDANA LVIERRWVPAMIIPFDQISGVSLATGLADMPRFGLRFAFNPGVFGYQGPFRLDPYGQVALFATNRHRLVAIARYDASVVI ISPDRPRDFIAALNEQRLVAATRQMEERDVSEVQNAV >Mature_196_residues TQSQPNRFMPAPLDEYAVKITYGLAYLGGLLVLPQFFAYLANIRWNGLQIPLGLAAALALFLLLSYAFQPRAYRIDANAL VIERRWVPAMIIPFDQISGVSLATGLADMPRFGLRFAFNPGVFGYQGPFRLDPYGQVALFATNRHRLVAIARYDASVVII SPDRPRDFIAALNEQRLVAATRQMEERDVSEVQNAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22022; Mature: 21891
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSQPNRFMPAPLDEYAVKITYGLAYLGGLLVLPQFFAYLANIRWNGLQIPLGLAAALA CCCCCCCCCCCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHH LFLLLSYAFQPRAYRIDANALVIERRWVPAMIIPFDQISGVSLATGLADMPRFGLRFAFN HHHHHHHHCCCCEEEECCCEEEEEECCCCEEEEEHHHCCCCHHHHCHHHCCCCCEEEEEC PGVFGYQGPFRLDPYGQVALFATNRHRLVAIARYDASVVIISPDRPRDFIAALNEQRLVA CCCCCCCCCEEECCCCCEEEEEECCCEEEEEEECCCEEEEECCCCCHHHHHHCCCCHHHH ATRQMEERDVSEVQNAV HHHHHHHHHHHHHHHCC >Mature Secondary Structure TQSQPNRFMPAPLDEYAVKITYGLAYLGGLLVLPQFFAYLANIRWNGLQIPLGLAAALA CCCCCCCCCCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHH LFLLLSYAFQPRAYRIDANALVIERRWVPAMIIPFDQISGVSLATGLADMPRFGLRFAFN HHHHHHHHCCCCEEEECCCEEEEEECCCCEEEEEHHHCCCCHHHHCHHHCCCCCEEEEEC PGVFGYQGPFRLDPYGQVALFATNRHRLVAIARYDASVVIISPDRPRDFIAALNEQRLVA CCCCCCCCCEEECCCCCEEEEEECCCEEEEEEECCCEEEEECCCCCHHHHHHCCCCHHHH ATRQMEERDVSEVQNAV HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA