| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524901
Identifier: 222524901
GI number: 222524901
Start: 2063096
End: 2063464
Strand: Reverse
Name: 222524901
Synonym: Chy400_1635
Alternate gene names: NA
Gene position: 2063464-2063096 (Counterclockwise)
Preceding gene: 222524902
Following gene: 222524900
Centisome position: 39.16
GC content: 56.37
Gene sequence:
>369_bases ATGAACCGCTGGCGCGACTGGTATGAGCAAGGTAAGCGTGATTACACACGCGCATTGTGGGCGTTTTTCACGTTGCAACA GGCGTCTGAAAAGGTGGTTAAGGCGTTGGGGCTGGCCAGGGGTGTGACCCTTTGGGGTCATTCTCTCACAGACAGGCTGA GACGACTGAACCAGGAGCTGGCGGTGCCAGAAGAGGTGCTGGATAGTGCTCGCTTGCTCGACCTGTACTACATCCCACCT TGCTATCCGAACGGTTTTGCCTCAGGAAAGCCAGCCGATTATGTTACCGAAACGCAGGCACAGGAGGGACTGCATGCGGC GGATCGAGTCATTCGGTTCTGTGAAAGCCATCTCCCTGGATCGCGCTGA
Upstream 100 bases:
>100_bases TCACGTACAATAGCAGCACAGGCGTAGTTTGCATCCCACGGCATCATCACCAGTAGATGCACAATGTACCCATTGACAGA CGGCGTGAAGGTGTCATTCG
Downstream 100 bases:
>100_bases GATTATACGTCGCCTGCGTGAGGTTGCCACCTCAGCACTGGTAACCTTTATGTGCGCGCCGTGTACCTGATTGGCTCCCT GGCCAGAGGATCGCACTCGG
Product: HEPN domain-containing protein
Products: NA
Alternate protein names: HEPN Domain Protein; Hepn Domain Protein; Hepn Domain-Containing Protein; Hepn Domain; HEPN Domain; Amidophosphoribosyltransferase
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MNRWRDWYEQGKRDYTRALWAFFTLQQASEKVVKALGLARGVTLWGHSLTDRLRRLNQELAVPEEVLDSARLLDLYYIPP CYPNGFASGKPADYVTETQAQEGLHAADRVIRFCESHLPGSR
Sequences:
>Translated_122_residues MNRWRDWYEQGKRDYTRALWAFFTLQQASEKVVKALGLARGVTLWGHSLTDRLRRLNQELAVPEEVLDSARLLDLYYIPP CYPNGFASGKPADYVTETQAQEGLHAADRVIRFCESHLPGSR >Mature_122_residues MNRWRDWYEQGKRDYTRALWAFFTLQQASEKVVKALGLARGVTLWGHSLTDRLRRLNQELAVPEEVLDSARLLDLYYIPP CYPNGFASGKPADYVTETQAQEGLHAADRVIRFCESHLPGSR
Specific function: Unknown
COG id: COG2250
COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14055; Mature: 14055
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRWRDWYEQGKRDYTRALWAFFTLQQASEKVVKALGLARGVTLWGHSLTDRLRRLNQEL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AVPEEVLDSARLLDLYYIPPCYPNGFASGKPADYVTETQAQEGLHAADRVIRFCESHLPG CCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC SR CC >Mature Secondary Structure MNRWRDWYEQGKRDYTRALWAFFTLQQASEKVVKALGLARGVTLWGHSLTDRLRRLNQEL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AVPEEVLDSARLLDLYYIPPCYPNGFASGKPADYVTETQAQEGLHAADRVIRFCESHLPG CCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC SR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA