| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524888
Identifier: 222524888
GI number: 222524888
Start: 2050083
End: 2051030
Strand: Reverse
Name: 222524888
Synonym: Chy400_1619
Alternate gene names: NA
Gene position: 2051030-2050083 (Counterclockwise)
Preceding gene: 222524889
Following gene: 222524887
Centisome position: 38.93
GC content: 59.7
Gene sequence:
>948_bases ATGGTAGCACGAGCAGAGCCATGTGTCCAATCGTCATCCGAGTCGGGCGAGACCGATCTGACGCCTGCCGAATGGGCCGT GATTCGTCCGCATCTCGACATCCGAGCCAAACCTGGACCGGCGCGCAAGGTTGACGTGCGGCACGTATTCGACGCCATCT GTTCCACACTGCGCACCGGGTATCAGTGGCGCCTATTGCCCACGGGCGTTCCGAAGCGCTCGACAGTGAGGTATTCCTTC CAGAAATGGACGACATCGGGGGTGCTGGCGCATATCAACGACATCCTGCGCCGCCAGGTGCGCATCGCGGTCGAGGGGCG TGACAACGCCGAGGCGACAGCAGGCGTGATCGACACCCAACGTGTGAAGAGTACTGAAGCCGGCGGTCCCGAGCGCGGCG TTGATGGCGGCACATTGGTGTCGGGACGCAAGCGGAACCTGCTGGTCGACACCTTAGGGTTGTTGATGACGGCGGTCGTC CATGCCGCTCACGTCTACGATGGGGTAGGCGCCAAGCGCGTGTTTACGGCGACAGCGCAGCGGGGGATCCGGTTGCAGAC AGTCTTGGCCGACCAAACCTATCGCGGTGATCTCACGGCATGGATGGACGAGCGGCAGTTCGGGGATCTGGAGATTGTGG AGCGCCTGCCAGGACAACGGGGCTTTCAGGTACAACCGCGCCGTTGGGTGGTCGAGCGCACCCACGCCTGGATGGGGCGC AATCGTCAGGTGAGCAAGGAATACGACCACAATCCACGCTCCTCCGAATGTTGGCTTTATCTTGCCTCCATCCGATTGCT CACCCGCCGTTTGACCAAAGCTGCATACATCTGGAGGCGCTATGGTTTGAATACTAGACAGGCTCTAAAGACTCACGCTG CTGGAAATGTGGACGATCATGTGCATATTATTGCATCTATTCCACCGAGATTGTCAGTAGCAGAATGA
Upstream 100 bases:
>100_bases TGCTGAACTGAACATATATAGCGTTTAACGCCACAACCCCCTCACTGATGGAGACTGAAGGTGATGAAGCCAACCAGTCA GACCAGAAGGGAGTGCCATG
Downstream 100 bases:
>100_bases GTACGGCAGGTGAAAGGTGCAAGTGCTCATGCTATTAATCGCATGGTGGGTGGTAATGGTCAATTTCGGTGGCAGCGTGG TTACGGCGCGTTGACGATAG
Product: transposase IS5 family protein
Products: NA
Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase IS5 Family Protein; IS5 Family Transposase; Transposase Of; IS4 Insertion Sequence Transposase Protein; Transposase And Inactivated Derivatives-Like Protein; Transposase-Like Protein; Transposase Fragment; Transposase Protein; ISXo3 Transposase ORF B; Transposase And Inactivated Derivatives; Transposase IS5 Family Protein-Like Protein; Family Transposase; Transposase IS4 Family; Transposon; IS4 Family Insertion Sequence Transposase Protein; Transposase Is4 Family; IS Transposase; ISPsy19 Transposase; Transposase IS5 Family; Isxo3 Transposase Protein; Insertion Sequence Transposase Truncated Protein; Transposase And Inactivated Derivatives-Like
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MVARAEPCVQSSSESGETDLTPAEWAVIRPHLDIRAKPGPARKVDVRHVFDAICSTLRTGYQWRLLPTGVPKRSTVRYSF QKWTTSGVLAHINDILRRQVRIAVEGRDNAEATAGVIDTQRVKSTEAGGPERGVDGGTLVSGRKRNLLVDTLGLLMTAVV HAAHVYDGVGAKRVFTATAQRGIRLQTVLADQTYRGDLTAWMDERQFGDLEIVERLPGQRGFQVQPRRWVVERTHAWMGR NRQVSKEYDHNPRSSECWLYLASIRLLTRRLTKAAYIWRRYGLNTRQALKTHAAGNVDDHVHIIASIPPRLSVAE
Sequences:
>Translated_315_residues MVARAEPCVQSSSESGETDLTPAEWAVIRPHLDIRAKPGPARKVDVRHVFDAICSTLRTGYQWRLLPTGVPKRSTVRYSF QKWTTSGVLAHINDILRRQVRIAVEGRDNAEATAGVIDTQRVKSTEAGGPERGVDGGTLVSGRKRNLLVDTLGLLMTAVV HAAHVYDGVGAKRVFTATAQRGIRLQTVLADQTYRGDLTAWMDERQFGDLEIVERLPGQRGFQVQPRRWVVERTHAWMGR NRQVSKEYDHNPRSSECWLYLASIRLLTRRLTKAAYIWRRYGLNTRQALKTHAAGNVDDHVHIIASIPPRLSVAE >Mature_315_residues MVARAEPCVQSSSESGETDLTPAEWAVIRPHLDIRAKPGPARKVDVRHVFDAICSTLRTGYQWRLLPTGVPKRSTVRYSF QKWTTSGVLAHINDILRRQVRIAVEGRDNAEATAGVIDTQRVKSTEAGGPERGVDGGTLVSGRKRNLLVDTLGLLMTAVV HAAHVYDGVGAKRVFTATAQRGIRLQTVLADQTYRGDLTAWMDERQFGDLEIVERLPGQRGFQVQPRRWVVERTHAWMGR NRQVSKEYDHNPRSSECWLYLASIRLLTRRLTKAAYIWRRYGLNTRQALKTHAAGNVDDHVHIIASIPPRLSVAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35386; Mature: 35386
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVARAEPCVQSSSESGETDLTPAEWAVIRPHLDIRAKPGPARKVDVRHVFDAICSTLRTG CCCCCCCHHCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCCEEHHHHHHHHHHHHHHCC YQWRLLPTGVPKRSTVRYSFQKWTTSGVLAHINDILRRQVRIAVEGRDNAEATAGVIDTQ CEEEEECCCCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHEEEEEECCCCCCHHHCCHHHH RVKSTEAGGPERGVDGGTLVSGRKRNLLVDTLGLLMTAVVHAAHVYDGVGAKRVFTATAQ HHHCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH RGIRLQTVLADQTYRGDLTAWMDERQFGDLEIVERLPGQRGFQVQPRRWVVERTHAWMGR CCCEEEEEECCCCCCCCHHHHHCCCCCCCHHHHHHCCCCCCCEECCHHHHHHHHHHHHCC NRQVSKEYDHNPRSSECWLYLASIRLLTRRLTKAAYIWRRYGLNTRQALKTHAAGNVDDH CCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC VHIIASIPPRLSVAE EEEEEECCCCCCCCC >Mature Secondary Structure MVARAEPCVQSSSESGETDLTPAEWAVIRPHLDIRAKPGPARKVDVRHVFDAICSTLRTG CCCCCCCHHCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCCEEHHHHHHHHHHHHHHCC YQWRLLPTGVPKRSTVRYSFQKWTTSGVLAHINDILRRQVRIAVEGRDNAEATAGVIDTQ CEEEEECCCCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHEEEEEECCCCCCHHHCCHHHH RVKSTEAGGPERGVDGGTLVSGRKRNLLVDTLGLLMTAVVHAAHVYDGVGAKRVFTATAQ HHHCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH RGIRLQTVLADQTYRGDLTAWMDERQFGDLEIVERLPGQRGFQVQPRRWVVERTHAWMGR CCCEEEEEECCCCCCCCHHHHHCCCCCCCHHHHHHCCCCCCCEECCHHHHHHHHHHHHCC NRQVSKEYDHNPRSSECWLYLASIRLLTRRLTKAAYIWRRYGLNTRQALKTHAAGNVDDH CCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC VHIIASIPPRLSVAE EEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA