| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is xpt
Identifier: 222524814
GI number: 222524814
Start: 1961592
End: 1962227
Strand: Reverse
Name: xpt
Synonym: Chy400_1541
Alternate gene names: 222524814
Gene position: 1962227-1961592 (Counterclockwise)
Preceding gene: 222524815
Following gene: 222524812
Centisome position: 37.24
GC content: 52.04
Gene sequence:
>636_bases ATGCAACTGGTTGAACGCTTTTTGTGCGAACCCTTTCCTCCGCTTGCTCAACGTATCATCCAGGAGGGTGTTGTTGTTAA TGATCGTATCCTCAAGATCGATCACTTCCTCAACCATCGGATTGATACAGACCTGATGTCTGCTATTGGTGTTGAACTGG CAACTCGCTTACAACCATTTGCCGCTGAGTTAATTCTGACCGCAGAGGCAAGTGGTATTCCACCGGCGCTGGCCACAGCC CTTGCTGCCCGGTTGCCTCTCGTGTATGCGAAAAAGTACGATCCCGATGTTCCAGTGCCGGCATTGACCCGCCATATCCA TTCACCAACCCGTGATCGTCAGGTTCAACTGGCAATCTCAGCCCGCTTTATTCCTGCGGGGAGTCGTGTGGCGATTGTCG ATGATTTTCTGGCTAATGGTCGTACTGCACTGGCTTTGGCCGATATGGTGTACGAGGCTGGAGCTACTGTGGTTGCCGCA GCATTTGTGGTTGAAAAGCAGTTTCAAGAAGGGCGGTTGTTGCTGCAAAAGCTGGGAGTCCCTATCATCTCGCTGGCACA GATTACGCGCTTTGTTGATGGCAGGCCTCTTATTTATGGCTGGCCATCATCTGTGCCGGGACAATCAGACGGGTAG
Upstream 100 bases:
>100_bases CACACTTTCCACAAGCCTACGATCATGACGAATTTCTTCTTGCGCTTTATTATTTTGATGTTAAGGGAGTTACCTGTTTA TAGTGGTGTGGATATATCCT
Downstream 100 bases:
>100_bases GTTGTTCCTATCGGAAACCTGTAGTCCCGTGGGCGAATGACAGAGATATTGATTGGCTTACCCTGATACGGAAAAAGAGC GCACGGTCAGTTTTGCTTCT
Product: xanthine phosphoribosyltransferase
Products: NA
Alternate protein names: XPRTase
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MQLVERFLCEPFPPLAQRIIQEGVVVNDRILKIDHFLNHRIDTDLMSAIGVELATRLQPFAAELILTAEASGIPPALATA LAARLPLVYAKKYDPDVPVPALTRHIHSPTRDRQVQLAISARFIPAGSRVAIVDDFLANGRTALALADMVYEAGATVVAA AFVVEKQFQEGRLLLQKLGVPIISLAQITRFVDGRPLIYGWPSSVPGQSDG
Sequences:
>Translated_211_residues MQLVERFLCEPFPPLAQRIIQEGVVVNDRILKIDHFLNHRIDTDLMSAIGVELATRLQPFAAELILTAEASGIPPALATA LAARLPLVYAKKYDPDVPVPALTRHIHSPTRDRQVQLAISARFIPAGSRVAIVDDFLANGRTALALADMVYEAGATVVAA AFVVEKQFQEGRLLLQKLGVPIISLAQITRFVDGRPLIYGWPSSVPGQSDG >Mature_211_residues MQLVERFLCEPFPPLAQRIIQEGVVVNDRILKIDHFLNHRIDTDLMSAIGVELATRLQPFAAELILTAEASGIPPALATA LAARLPLVYAKKYDPDVPVPALTRHIHSPTRDRQVQLAISARFIPAGSRVAIVDDFLANGRTALALADMVYEAGATVVAA AFVVEKQFQEGRLLLQKLGVPIISLAQITRFVDGRPLIYGWPSSVPGQSDG
Specific function: Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. XPT subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): XPT_CHLAA (A9WA88)
Other databases:
- EMBL: CP000909 - RefSeq: YP_001635036.1 - ProteinModelPortal: A9WA88 - SMR: A9WA88 - GeneID: 5828525 - GenomeReviews: CP000909_GR - KEGG: cau:Caur_1419 - HOGENOM: HBG288993 - OMA: ATVYSFT - ProtClustDB: CLSK2488558 - GO: GO:0005737 - HAMAP: MF_01184 - InterPro: IPR000836 - InterPro: IPR010079 - TIGRFAMs: TIGR01744
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.22
Molecular weight: Translated: 22951; Mature: 22951
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: BINDING 31-31 BINDING 38-38 BINDING 166-166
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLVERFLCEPFPPLAQRIIQEGVVVNDRILKIDHFLNHRIDTDLMSAIGVELATRLQPF CCHHHHHHCCCCCHHHHHHHHCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AAELILTAEASGIPPALATALAARLPLVYAKKYDPDVPVPALTRHIHSPTRDRQVQLAIS HHHHEEECCCCCCCHHHHHHHHHHCCHHEECCCCCCCCHHHHHHHHCCCCCCCEEEEEEE ARFIPAGSRVAIVDDFLANGRTALALADMVYEAGATVVAAAFVVEKQFQEGRLLLQKLGV EEEECCCCEEEEEHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC PIISLAQITRFVDGRPLIYGWPSSVPGQSDG CHHHHHHHHHHHCCCEEEEECCCCCCCCCCC >Mature Secondary Structure MQLVERFLCEPFPPLAQRIIQEGVVVNDRILKIDHFLNHRIDTDLMSAIGVELATRLQPF CCHHHHHHCCCCCHHHHHHHHCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AAELILTAEASGIPPALATALAARLPLVYAKKYDPDVPVPALTRHIHSPTRDRQVQLAIS HHHHEEECCCCCCCHHHHHHHHHHCCHHEECCCCCCCCHHHHHHHHCCCCCCCEEEEEEE ARFIPAGSRVAIVDDFLANGRTALALADMVYEAGATVVAAAFVVEKQFQEGRLLLQKLGV EEEECCCCEEEEEHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC PIISLAQITRFVDGRPLIYGWPSSVPGQSDG CHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA