| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524796
Identifier: 222524796
GI number: 222524796
Start: 1941693
End: 1942691
Strand: Reverse
Name: 222524796
Synonym: Chy400_1523
Alternate gene names: NA
Gene position: 1942691-1941693 (Counterclockwise)
Preceding gene: 222524797
Following gene: 222524793
Centisome position: 36.87
GC content: 63.86
Gene sequence:
>999_bases ATGAACCCACCGAAATGTGACGAACTGGATTATATCCACGTTCTGGTCGCAGCGCAGCACGTGTTCAGCAATACAGCAGC AGCACGCTGCCATCCGGGAGCGCCCACGAACCGTCCGGCGCATGCTGCCTCCACGCGTCTGCTGCACCGGTGTCGTGCGG ATGGCACTGCCGTGTGGGACGAGGTACGCCCCTGGGTGTCATTGACCACGGGCTGCTTGATGATCGACGACACGACGCTG GACAAGCCATATAGTCGGGCGATGGAGCTGGTTACCCGCCATTGGTCGGGGAAACATCAGCGGGTGGTGGTAGGTATCAA TCTGATCAGGATGCTGTGGACTGATGGGAATGCCCACCTGCCCTGTGACTTCCGTATCGACGACAACGCCCACGATGGGT TGACCAAGAACGACCACGTCCGGGCGATGGTGCAGGCGGCGGCCGCACGCGGGTTTCAGCCTCGCCTGCTTGCCTTCGCC AGCTGGTATGCGAGCCTGGAGAACCTGACGCTGGTGCGCTCGCTGCCCTGGCAGTGGCTGACCCACCTGAACGCCAATCG CCTGGGTGATCCTGATGGGTCGGGCAACCGACCGATCCGGGACGTCCCGATTCCGGCTGCGGGCACCATCGTGCATCTGA AGGGCTATGGCTTCATCAAGGTGGTCGCGATAGCCACCCCAGCCGGTGGCAGTGACGACTGGGCCACGAGCGACCTGGCG ATGCGTGCCGACCAGTGGGTGGAGGACGCCCGGTACCGGTGGCGGATCGAAGCGTACCATCGCGGGATCACGCAGTACTG TGGCATTGAACGCGCCCAGCACCGCGCCGCTCGTGCCCAGCGGAATCACATCGGTCTGGCGCTGCGGGCCTTCCTCCGCC TGGCATGGCACCGGTTGCGGACAGGCACGTCGTGGTTTGAGGCCACAGCCGCCATCGTCCGTGAGGCGATACGAGCCTAC CTGGCTCATCCACGCTCTACCCAGCTCTCAACTGCGTAA
Upstream 100 bases:
>100_bases TTCCCGATGAAGTATACGTGAGGCGATAAACCGTGTTCACACTTGTTGCACTTGTCGCTCCGTCTCCCGTGTTTCTGGCT GACGATGGAGGTGTACGCTG
Downstream 100 bases:
>100_bases CTCCTGATCAGATCAAGACATGCGTCCCCTGTCGCTCGTGGCTAACCGCCGTCGGCGGTGCAATCGTCGGCACAAACGCG GGTTCGGCGTCACGTCGCAG
Product: transposase IS701 family protein
Products: NA
Alternate protein names: Transposase; IS4 Family Transposase; IS4-Like Transposase
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MNPPKCDELDYIHVLVAAQHVFSNTAAARCHPGAPTNRPAHAASTRLLHRCRADGTAVWDEVRPWVSLTTGCLMIDDTTL DKPYSRAMELVTRHWSGKHQRVVVGINLIRMLWTDGNAHLPCDFRIDDNAHDGLTKNDHVRAMVQAAAARGFQPRLLAFA SWYASLENLTLVRSLPWQWLTHLNANRLGDPDGSGNRPIRDVPIPAAGTIVHLKGYGFIKVVAIATPAGGSDDWATSDLA MRADQWVEDARYRWRIEAYHRGITQYCGIERAQHRAARAQRNHIGLALRAFLRLAWHRLRTGTSWFEATAAIVREAIRAY LAHPRSTQLSTA
Sequences:
>Translated_332_residues MNPPKCDELDYIHVLVAAQHVFSNTAAARCHPGAPTNRPAHAASTRLLHRCRADGTAVWDEVRPWVSLTTGCLMIDDTTL DKPYSRAMELVTRHWSGKHQRVVVGINLIRMLWTDGNAHLPCDFRIDDNAHDGLTKNDHVRAMVQAAAARGFQPRLLAFA SWYASLENLTLVRSLPWQWLTHLNANRLGDPDGSGNRPIRDVPIPAAGTIVHLKGYGFIKVVAIATPAGGSDDWATSDLA MRADQWVEDARYRWRIEAYHRGITQYCGIERAQHRAARAQRNHIGLALRAFLRLAWHRLRTGTSWFEATAAIVREAIRAY LAHPRSTQLSTA >Mature_332_residues MNPPKCDELDYIHVLVAAQHVFSNTAAARCHPGAPTNRPAHAASTRLLHRCRADGTAVWDEVRPWVSLTTGCLMIDDTTL DKPYSRAMELVTRHWSGKHQRVVVGINLIRMLWTDGNAHLPCDFRIDDNAHDGLTKNDHVRAMVQAAAARGFQPRLLAFA SWYASLENLTLVRSLPWQWLTHLNANRLGDPDGSGNRPIRDVPIPAAGTIVHLKGYGFIKVVAIATPAGGSDDWATSDLA MRADQWVEDARYRWRIEAYHRGITQYCGIERAQHRAARAQRNHIGLALRAFLRLAWHRLRTGTSWFEATAAIVREAIRAY LAHPRSTQLSTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37203; Mature: 37203
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPPKCDELDYIHVLVAAQHVFSNTAAARCHPGAPTNRPAHAASTRLLHRCRADGTAVWD CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH EVRPWVSLTTGCLMIDDTTLDKPYSRAMELVTRHWSGKHQRVVVGINLIRMLWTDGNAHL HHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEHHEEEEHEEECCCCCC PCDFRIDDNAHDGLTKNDHVRAMVQAAAARGFQPRLLAFASWYASLENLTLVRSLPWQWL CEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH THLNANRLGDPDGSGNRPIRDVPIPAAGTIVHLKGYGFIKVVAIATPAGGSDDWATSDLA HHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCHHHH MRADQWVEDARYRWRIEAYHRGITQYCGIERAQHRAARAQRNHIGLALRAFLRLAWHRLR HHHHHHHHHHHHEEEHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGTSWFEATAAIVREAIRAYLAHPRSTQLSTA CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNPPKCDELDYIHVLVAAQHVFSNTAAARCHPGAPTNRPAHAASTRLLHRCRADGTAVWD CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH EVRPWVSLTTGCLMIDDTTLDKPYSRAMELVTRHWSGKHQRVVVGINLIRMLWTDGNAHL HHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEHHEEEEHEEECCCCCC PCDFRIDDNAHDGLTKNDHVRAMVQAAAARGFQPRLLAFASWYASLENLTLVRSLPWQWL CEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH THLNANRLGDPDGSGNRPIRDVPIPAAGTIVHLKGYGFIKVVAIATPAGGSDDWATSDLA HHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCHHHH MRADQWVEDARYRWRIEAYHRGITQYCGIERAQHRAARAQRNHIGLALRAFLRLAWHRLR HHHHHHHHHHHHEEEHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGTSWFEATAAIVREAIRAYLAHPRSTQLSTA CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA