| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524778
Identifier: 222524778
GI number: 222524778
Start: 1905235
End: 1906353
Strand: Reverse
Name: 222524778
Synonym: Chy400_1505
Alternate gene names: NA
Gene position: 1906353-1905235 (Counterclockwise)
Preceding gene: 222524779
Following gene: 222524777
Centisome position: 36.18
GC content: 56.48
Gene sequence:
>1119_bases ATGATTCGTTTTGCAATCGATGCCCGCTTACACGCCTACCGTCAGGGTGGTATTACCCACTACACGCGCAGTCTGGCGAC AGCCATGATCCCGTTGCTCGGTGATGATGAGGAGTTGATCGTTTTGGAGCACGTCCGTGCCCGTACCTCGCTCGTTACTG CGGCACGCCGGAGCCGGTTGTTCACCCCACCGCATCATCCACTCGAGCAGCTCGCGTTACCAGTCGAAGTCTGGTTTCGT CGCCCCTCGCTGCTGCATAGCCCCGATTTTATTCCACCTTTGATCCGTACCTTCCCATCAGTCATTACCATTCACGATCT CGCATTTCTGCACTTTCCAGAAATCCTCGACCGGGCAGCACGGCGCTACTATGGTCAGATTTATCAGGCTGCTGCCAGCG CCGAGGCAATTATTGCGGTATCGCAGGCGACTCGTGATGATATTGTTGATCGGCTAGGGGTACCACCCGAACGAATCACG GTCATTTATGAAGCAGCCGATGCCCGTTTTCGTCCCTGGCACCTTCCTCCAGGTGCAACGCGAACGATAGATGGTCAGAT GCTGAGAAACGATACGTTCTTGCTCTTTGTCAGCACCATCGAACCGCGCAAGAATATTCCTACGCTGCTGCGCGCTCTGC GCATCTGTTGTGATCGCCGACCATCGGTCAATTATCACCTGGTGCTGGCCGGTGCACGTGGCTGGCTTGATCAACCGATT TTGTCACTGATCGGTGAATTGGGTTTGCAGGATCGGGTCACCCGGATTGGCTTCGTTAGTGGTGAGGATCTGCACTGGTT GTATGCAGCCTGCCGTATCTATTTGAATCCATCGCGTTACGAAGGGTTTGGATTACCGGCCCTTGAGGCCCTGGCCTGCG GTGCGCCAACTATCGTCGCCGATACCAGCAGCCTGCCCGAAGTGGTTGGTGACGCCGCCTGGCTGGCACCGCCACTCGAT CCAATTGCCTGGGCCGATCTGATCGAGAAACTCTGGCACGACGACTCGGCGCGGAAGGAACTCTCCCGGCGTGGGCCACA ACAGGCGGCACGCTTTTCATGGACAACGGCGGCACAACAGACATTAGCCCTCTACCGCCAGTTAATCAGACGATTCTGA
Upstream 100 bases:
>100_bases TGTTGATTATCGAGCCGACTATGGCCTGCCGCCTGAGGTGACCTTCGCCTACGATGGCCTTGAGATTGAGGTTTGATCCG CTGTTACCGAATAACACACG
Downstream 100 bases:
>100_bases GGATGTGTAGAGCTGCTGCAACGCAACAGCTCTACTGTTTAACCCTCCGTTATTTCGGTGCGTAAAAGAGGATGCAGATG TGTTGCCGCTCAGAGCTGGT
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MIRFAIDARLHAYRQGGITHYTRSLATAMIPLLGDDEELIVLEHVRARTSLVTAARRSRLFTPPHHPLEQLALPVEVWFR RPSLLHSPDFIPPLIRTFPSVITIHDLAFLHFPEILDRAARRYYGQIYQAAASAEAIIAVSQATRDDIVDRLGVPPERIT VIYEAADARFRPWHLPPGATRTIDGQMLRNDTFLLFVSTIEPRKNIPTLLRALRICCDRRPSVNYHLVLAGARGWLDQPI LSLIGELGLQDRVTRIGFVSGEDLHWLYAACRIYLNPSRYEGFGLPALEALACGAPTIVADTSSLPEVVGDAAWLAPPLD PIAWADLIEKLWHDDSARKELSRRGPQQAARFSWTTAAQQTLALYRQLIRRF
Sequences:
>Translated_372_residues MIRFAIDARLHAYRQGGITHYTRSLATAMIPLLGDDEELIVLEHVRARTSLVTAARRSRLFTPPHHPLEQLALPVEVWFR RPSLLHSPDFIPPLIRTFPSVITIHDLAFLHFPEILDRAARRYYGQIYQAAASAEAIIAVSQATRDDIVDRLGVPPERIT VIYEAADARFRPWHLPPGATRTIDGQMLRNDTFLLFVSTIEPRKNIPTLLRALRICCDRRPSVNYHLVLAGARGWLDQPI LSLIGELGLQDRVTRIGFVSGEDLHWLYAACRIYLNPSRYEGFGLPALEALACGAPTIVADTSSLPEVVGDAAWLAPPLD PIAWADLIEKLWHDDSARKELSRRGPQQAARFSWTTAAQQTLALYRQLIRRF >Mature_372_residues MIRFAIDARLHAYRQGGITHYTRSLATAMIPLLGDDEELIVLEHVRARTSLVTAARRSRLFTPPHHPLEQLALPVEVWFR RPSLLHSPDFIPPLIRTFPSVITIHDLAFLHFPEILDRAARRYYGQIYQAAASAEAIIAVSQATRDDIVDRLGVPPERIT VIYEAADARFRPWHLPPGATRTIDGQMLRNDTFLLFVSTIEPRKNIPTLLRALRICCDRRPSVNYHLVLAGARGWLDQPI LSLIGELGLQDRVTRIGFVSGEDLHWLYAACRIYLNPSRYEGFGLPALEALACGAPTIVADTSSLPEVVGDAAWLAPPLD PIAWADLIEKLWHDDSARKELSRRGPQQAARFSWTTAAQQTLALYRQLIRRF
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 41976; Mature: 41976
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: PS00398 RECOMBINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRFAIDARLHAYRQGGITHYTRSLATAMIPLLGDDEELIVLEHVRARTSLVTAARRSRL CEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCC FTPPHHPLEQLALPVEVWFRRPSLLHSPDFIPPLIRTFPSVITIHDLAFLHFPEILDRAA CCCCCCCHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRYYGQIYQAAASAEAIIAVSQATRDDIVDRLGVPPERITVIYEAADARFRPWHLPPGAT HHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCCCCCC RTIDGQMLRNDTFLLFVSTIEPRKNIPTLLRALRICCDRRPSVNYHLVLAGARGWLDQPI CCCCCCEEECCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHH LSLIGELGLQDRVTRIGFVSGEDLHWLYAACRIYLNPSRYEGFGLPALEALACGAPTIVA HHHHHHCCHHHHHHHHEECCCCCHHHHHHHHHHEECCCCCCCCCCCHHHHHHCCCCEEEE DTSSLPEVVGDAAWLAPPLDPIAWADLIEKLWHDDSARKELSRRGPQQAARFSWTTAAQQ CCCHHHHHHCCHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHH TLALYRQLIRRF HHHHHHHHHHHC >Mature Secondary Structure MIRFAIDARLHAYRQGGITHYTRSLATAMIPLLGDDEELIVLEHVRARTSLVTAARRSRL CEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCC FTPPHHPLEQLALPVEVWFRRPSLLHSPDFIPPLIRTFPSVITIHDLAFLHFPEILDRAA CCCCCCCHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRYYGQIYQAAASAEAIIAVSQATRDDIVDRLGVPPERITVIYEAADARFRPWHLPPGAT HHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCCCCCC RTIDGQMLRNDTFLLFVSTIEPRKNIPTLLRALRICCDRRPSVNYHLVLAGARGWLDQPI CCCCCCEEECCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHH LSLIGELGLQDRVTRIGFVSGEDLHWLYAACRIYLNPSRYEGFGLPALEALACGAPTIVA HHHHHHCCHHHHHHHHEECCCCCHHHHHHHHHHEECCCCCCCCCCCHHHHHHCCCCEEEE DTSSLPEVVGDAAWLAPPLDPIAWADLIEKLWHDDSARKELSRRGPQQAARFSWTTAAQQ CCCHHHHHHCCHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHH TLALYRQLIRRF HHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]