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The map label for this gene is ybgL [C]

Identifier: 222524710

GI number: 222524710

Start: 1825318

End: 1826079

Strand: Reverse

Name: ybgL [C]

Synonym: Chy400_1437

Alternate gene names: 222524710

Gene position: 1826079-1825318 (Counterclockwise)

Preceding gene: 222524711

Following gene: 222524709

Centisome position: 34.66

GC content: 59.97

Gene sequence:

>762_bases
ATGTTGACGATTGATATCAACTGCGATTGTGGTGAGAGTTACGGCGCTTTTCAGGTCGGTGACGACGATGGTATACTGCC
GTTTGTCAGTTCGGCAAATGTCGCCTGTGGCGGTCATGCCGGTGATCCGATGGTGATGCGGCGCACTGTCCGGCGTTGCC
GTGATCTGGGGGTGGCGGTTGGTGCTCATCCTTCCTACCCCGATCTGTACGGCTTTGGCCGCCGGGTATTACCGCTAACA
CCGGATGAGATCGAGGCGTGGGTGCTGACTCAGATCGGTTCTTTAGCCGCAATTGCCCGCTCGGAAAAGGTTGAATTGCG
CCATGTGAAGCCTCACGGTGCGCTCTACAATGTGGCCGCCCGCGACCTTACCGTGGCGATGGCGATTGCCCGTGCCGTGG
CTGCCTTCAGCCGTGAACTGGCTCTGGTTGGATTGGCCGGCTCGTTGCTGATCACCGCCGGCCACGAAGTCGGCGTGCCG
GTGCTGGCAGAGGCTTTTGCCGACCGTACCTACGAAGCCGATGGTACGTTGCGCAACCGGCATCATCCCGATGCCCTGAT
TATCGATCCGGCAGCATGTCTGGCCCAGACACTGCATATTATTCGCGATGGTGCGGTCAGAGCCGTTGATGGCACACTCG
TGCCATTACAGGCCGCCACAATTTGTATCCACGGCGATACACCGGGTGCCGCGCTGCGAGCAGCAACGATCCGTCAGGGT
CTGGCTGCCGCAGGCATCACCGTACAGGCGCCACAACGATGA

Upstream 100 bases:

>100_bases
GTGGTTGATGCCGGTGTGATGCTATTGCTGCTGCTTGTGGCACGACATGGGATGAAACGGGTGCCGAGAATTGCCGAGGC
ACCAGTAGGGTAGCGAAGCG

Downstream 100 bases:

>100_bases
GCGGACGGGTAGATCCATTTGGCGAAGCAGCGTTCCTGGTGCGCTGGCCGACCGATCTGGCCGGCGCAGGGGCACCGCTG
GCCGCAATGGCTGCACTCCA

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MLTIDINCDCGESYGAFQVGDDDGILPFVSSANVACGGHAGDPMVMRRTVRRCRDLGVAVGAHPSYPDLYGFGRRVLPLT
PDEIEAWVLTQIGSLAAIARSEKVELRHVKPHGALYNVAARDLTVAMAIARAVAAFSRELALVGLAGSLLITAGHEVGVP
VLAEAFADRTYEADGTLRNRHHPDALIIDPAACLAQTLHIIRDGAVRAVDGTLVPLQAATICIHGDTPGAALRAATIRQG
LAAAGITVQAPQR

Sequences:

>Translated_253_residues
MLTIDINCDCGESYGAFQVGDDDGILPFVSSANVACGGHAGDPMVMRRTVRRCRDLGVAVGAHPSYPDLYGFGRRVLPLT
PDEIEAWVLTQIGSLAAIARSEKVELRHVKPHGALYNVAARDLTVAMAIARAVAAFSRELALVGLAGSLLITAGHEVGVP
VLAEAFADRTYEADGTLRNRHHPDALIIDPAACLAQTLHIIRDGAVRAVDGTLVPLQAATICIHGDTPGAALRAATIRQG
LAAAGITVQAPQR
>Mature_253_residues
MLTIDINCDCGESYGAFQVGDDDGILPFVSSANVACGGHAGDPMVMRRTVRRCRDLGVAVGAHPSYPDLYGFGRRVLPLT
PDEIEAWVLTQIGSLAAIARSEKVELRHVKPHGALYNVAARDLTVAMAIARAVAAFSRELALVGLAGSLLITAGHEVGVP
VLAEAFADRTYEADGTLRNRHHPDALIIDPAACLAQTLHIIRDGAVRAVDGTLVPLQAATICIHGDTPGAALRAATIRQG
LAAAGITVQAPQR

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family

Homologues:

Organism=Escherichia coli, GI1786931, Length=249, Percent_Identity=46.9879518072289, Blast_Score=209, Evalue=1e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1315_CHLAA (A9W9Q7)

Other databases:

- EMBL:   CP000909
- RefSeq:   YP_001634932.1
- ProteinModelPortal:   A9W9Q7
- SMR:   A9W9Q7
- GeneID:   5828419
- GenomeReviews:   CP000909_GR
- KEGG:   cau:Caur_1315
- HOGENOM:   HBG482818
- OMA:   QTICLHG
- ProtClustDB:   CLSK2476863
- HAMAP:   MF_00691
- InterPro:   IPR011330
- InterPro:   IPR005501

Pfam domain/function: PF03746 LamB_YcsF; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 26536; Mature: 26536

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTIDINCDCGESYGAFQVGDDDGILPFVSSANVACGGHAGDPMVMRRTVRRCRDLGVAV
CEEEEECCCCCCCCCCEEECCCCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHHCCEEE
GAHPSYPDLYGFGRRVLPLTPDEIEAWVLTQIGSLAAIARSEKVELRHVKPHGALYNVAA
CCCCCCCCHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEHHH
RDLTVAMAIARAVAAFSRELALVGLAGSLLITAGHEVGVPVLAEAFADRTYEADGTLRNR
HHHHHHHHHHHHHHHHHHHEEEEEECCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCC
HHPDALIIDPAACLAQTLHIIRDGAVRAVDGTLVPLQAATICIHGDTPGAALRAATIRQG
CCCCEEEECHHHHHHHHHHHHHCCCEEEECCEEEEEEEEEEEEECCCCCHHHHHHHHHHH
LAAAGITVQAPQR
HHHCCEEEECCCC
>Mature Secondary Structure
MLTIDINCDCGESYGAFQVGDDDGILPFVSSANVACGGHAGDPMVMRRTVRRCRDLGVAV
CEEEEECCCCCCCCCCEEECCCCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHHCCEEE
GAHPSYPDLYGFGRRVLPLTPDEIEAWVLTQIGSLAAIARSEKVELRHVKPHGALYNVAA
CCCCCCCCHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEHHH
RDLTVAMAIARAVAAFSRELALVGLAGSLLITAGHEVGVPVLAEAFADRTYEADGTLRNR
HHHHHHHHHHHHHHHHHHHEEEEEECCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCC
HHPDALIIDPAACLAQTLHIIRDGAVRAVDGTLVPLQAATICIHGDTPGAALRAATIRQG
CCCCEEEECHHHHHHHHHHHHHCCCEEEECCEEEEEEEEEEEEECCCCCHHHHHHHHHHH
LAAAGITVQAPQR
HHHCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA