| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is purM [H]
Identifier: 222524655
GI number: 222524655
Start: 1761604
End: 1762632
Strand: Reverse
Name: purM [H]
Synonym: Chy400_1382
Alternate gene names: 222524655
Gene position: 1762632-1761604 (Counterclockwise)
Preceding gene: 222524656
Following gene: 222524654
Centisome position: 33.45
GC content: 62.0
Gene sequence:
>1029_bases ATGTCGCAATATAGTGCAGCCGGCGTGGATATTGCTGCGGCAACGCGGGCGAAAGAGTTGATGGCAGACGCGGTGCGGAG TACACACGGGCCGGCAGTGCTGGCCGGGATGGGAGCTTTTGGTGGATGTTTCGATGCGGCACTGGCGCTGGCCGGGATGC AGGCGCCCGTTCTGGTCAGCAGTACCGATGGGGTGGGTACCAAGACGCTGGTGGCCGCGGCGTTGGGGCGGTACGATACG GTTGGGCAAGACCTGGTCAATCACGCGGTGAACGATATTCTGGTGCAGGGGGCGCGGCCACTGTTCTTTCTCGACTATAT CGCTGTCGCTAAACTCGATCCGGCACAGGTAGCTGCGATTGTGACCGGTGTGGCCGAGGGGTGTCGGGCGGCTGGTTGTG CCCTGATCGGTGGGGAAACGGCGGAAATGCCGGATGTGTACGCGCCGGGGGCGTTCGATCTGGCCGGGACGATTGTGGGG GTTGTAGAACGAACGGCGATGTTGCCGCGCCCTGATATTGTGCCCGGCGATGCGATCCTGGCCTTGCCCAGTACCGGCTT GCACACCAATGGCTATTCGCTTGCCCGTCGGCTGGTGGCGCGCCACTTTGCGACCGACGGCTATGCGGCCCGTCCGTCAA TTCTCAACGGCCAGACCATTGGCGAAGCGTTGCTGGCGATCCATCGCTGTTACCTGGCAGAGGTGAATGCACTACGAGCC GCAGTGCTGGTGAAAGCGCTCTGTCACATTACCGGCGGCGGCATTTACGACAACCTTCCCCGCGTGCTGCCTGCCGGTCT GGGGGCCGAGATTGTACGGGGAAGCTGGCCAATTCCCCCGATCTGTCAGTTGCTGGTCGATATTGGTGGACTTGACGAGC GGGAAGCGTTTCATGCCCTGAATATGGGTCTGGGGATGCTGGTCATTGTTCCTGCCGATGCTGCGGCAACCGCGCTCGCT ACCATTGCCGATGCCTGTCTGGTTGGACGAGTGACCGCAACGCCTGAAGTACGGCTGGTTGATGCCTGA
Upstream 100 bases:
>100_bases TCGGCGCGAGCAGTGTCACAACCGTGCAGGTACAACACGTCTTCCGGGCTGAAAGTGAGGCGTTTGCGCGCCTCTGCGCA CGTCTTGACGAGGAGTAGTT
Downstream 100 bases:
>100_bases AGGAGGCAGCAATGGAACTCGGCTATGTTTTGACCGAAGGGAAGACCAAAATTGTGTACGCTCACCCGACCGATCCCGAC CTGGCGATTCTCTATCACAA
Product: phosphoribosylaminoimidazole synthetase
Products: NA
Alternate protein names: AIR synthase; AIRS; Phosphoribosyl-aminoimidazole synthetase [H]
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MSQYSAAGVDIAAATRAKELMADAVRSTHGPAVLAGMGAFGGCFDAALALAGMQAPVLVSSTDGVGTKTLVAAALGRYDT VGQDLVNHAVNDILVQGARPLFFLDYIAVAKLDPAQVAAIVTGVAEGCRAAGCALIGGETAEMPDVYAPGAFDLAGTIVG VVERTAMLPRPDIVPGDAILALPSTGLHTNGYSLARRLVARHFATDGYAARPSILNGQTIGEALLAIHRCYLAEVNALRA AVLVKALCHITGGGIYDNLPRVLPAGLGAEIVRGSWPIPPICQLLVDIGGLDEREAFHALNMGLGMLVIVPADAAATALA TIADACLVGRVTATPEVRLVDA
Sequences:
>Translated_342_residues MSQYSAAGVDIAAATRAKELMADAVRSTHGPAVLAGMGAFGGCFDAALALAGMQAPVLVSSTDGVGTKTLVAAALGRYDT VGQDLVNHAVNDILVQGARPLFFLDYIAVAKLDPAQVAAIVTGVAEGCRAAGCALIGGETAEMPDVYAPGAFDLAGTIVG VVERTAMLPRPDIVPGDAILALPSTGLHTNGYSLARRLVARHFATDGYAARPSILNGQTIGEALLAIHRCYLAEVNALRA AVLVKALCHITGGGIYDNLPRVLPAGLGAEIVRGSWPIPPICQLLVDIGGLDEREAFHALNMGLGMLVIVPADAAATALA TIADACLVGRVTATPEVRLVDA >Mature_341_residues SQYSAAGVDIAAATRAKELMADAVRSTHGPAVLAGMGAFGGCFDAALALAGMQAPVLVSSTDGVGTKTLVAAALGRYDTV GQDLVNHAVNDILVQGARPLFFLDYIAVAKLDPAQVAAIVTGVAEGCRAAGCALIGGETAEMPDVYAPGAFDLAGTIVGV VERTAMLPRPDIVPGDAILALPSTGLHTNGYSLARRLVARHFATDGYAARPSILNGQTIGEALLAIHRCYLAEVNALRAA VLVKALCHITGGGIYDNLPRVLPAGLGAEIVRGSWPIPPICQLLVDIGGLDEREAFHALNMGLGMLVIVPADAAATALAT IADACLVGRVTATPEVRLVDA
Specific function: De novo purine biosynthesis; fifth step. [C]
COG id: COG0150
COG function: function code F; Phosphoribosylaminoimidazole (AIR) synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR synthase family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=339, Percent_Identity=42.1828908554572, Blast_Score=254, Evalue=1e-67, Organism=Homo sapiens, GI209869995, Length=339, Percent_Identity=42.1828908554572, Blast_Score=254, Evalue=1e-67, Organism=Homo sapiens, GI209869993, Length=339, Percent_Identity=42.1828908554572, Blast_Score=254, Evalue=1e-67, Organism=Escherichia coli, GI1788845, Length=343, Percent_Identity=41.6909620991254, Blast_Score=248, Evalue=4e-67, Organism=Caenorhabditis elegans, GI17567511, Length=315, Percent_Identity=37.7777777777778, Blast_Score=178, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6321203, Length=309, Percent_Identity=40.1294498381877, Blast_Score=227, Evalue=3e-60, Organism=Drosophila melanogaster, GI24582400, Length=289, Percent_Identity=35.6401384083045, Blast_Score=167, Evalue=9e-42,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR004733 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.3.1 [H]
Molecular weight: Translated: 34890; Mature: 34759
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQYSAAGVDIAAATRAKELMADAVRSTHGPAVLAGMGAFGGCFDAALALAGMQAPVLVS CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEE STDGVGTKTLVAAALGRYDTVGQDLVNHAVNDILVQGARPLFFLDYIAVAKLDPAQVAAI CCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHH VTGVAEGCRAAGCALIGGETAEMPDVYAPGAFDLAGTIVGVVERTAMLPRPDIVPGDAIL HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEE ALPSTGLHTNGYSLARRLVARHFATDGYAARPSILNGQTIGEALLAIHRCYLAEVNALRA EECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AVLVKALCHITGGGIYDNLPRVLPAGLGAEIVRGSWPIPPICQLLVDIGGLDEREAFHAL HHHHHHHHHHCCCCHHHCCHHHHCCCCCHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHH NMGLGMLVIVPADAAATALATIADACLVGRVTATPEVRLVDA HCCCCEEEEECCCHHHHHHHHHHHHHHHCCEECCCCEEEECC >Mature Secondary Structure SQYSAAGVDIAAATRAKELMADAVRSTHGPAVLAGMGAFGGCFDAALALAGMQAPVLVS CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEE STDGVGTKTLVAAALGRYDTVGQDLVNHAVNDILVQGARPLFFLDYIAVAKLDPAQVAAI CCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHH VTGVAEGCRAAGCALIGGETAEMPDVYAPGAFDLAGTIVGVVERTAMLPRPDIVPGDAIL HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEE ALPSTGLHTNGYSLARRLVARHFATDGYAARPSILNGQTIGEALLAIHRCYLAEVNALRA EECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AVLVKALCHITGGGIYDNLPRVLPAGLGAEIVRGSWPIPPICQLLVDIGGLDEREAFHAL HHHHHHHHHHCCCCHHHCCHHHHCCCCCHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHH NMGLGMLVIVPADAAATALATIADACLVGRVTATPEVRLVDA HCCCCEEEEECCCHHHHHHHHHHHHHHHCCEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]