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The map label for this gene is dppC [H]

Identifier: 222524540

GI number: 222524540

Start: 1609338

End: 1610591

Strand: Reverse

Name: dppC [H]

Synonym: Chy400_1264

Alternate gene names: 222524540

Gene position: 1610591-1609338 (Counterclockwise)

Preceding gene: 222524541

Following gene: 222524539

Centisome position: 30.57

GC content: 50.64

Gene sequence:

>1254_bases
ATGCAACACACACTTCGACAGGTTTTTCGCTCTGGTAAGTTTGTGGTGGGATTCACTATCCTGATGACAATCCTCCTGAT
TGTCATTGTTTACCCTTTAATCGTGCGCCATCCACCGTTACAGATCATTGGGCAGGGAACGTTCTTCCCACCTGGTATCT
ATGTCAGTGTCTACGATGCCGTCAACTCGCCGGTCTTGTATACGCTTAACCTTGAGGACGCCGCCGTCAAGCGCATTGAA
AACCGGTTGCGTCAGGAAGACCGTGTTGCCATGAAGGAGTGGCTGGTCGCGTTCGGGGTGCCCGCAGAAGAGATCGATAC
CAACGATACGGAAAAGTTGTTGGCACTCTGGGAGGCGAACTATGATCCGAACCTGCGCTTAGAGGGCATGACCTTTGCCC
GGCAGCGCTATTTCCAACGGGTTGATGCTGCTCTTGAAGGGCTACTCTCTACGGAGCCGGCGATCATTGCTGTGCCCAAC
TCAGCGACGGGTGCCCTCGAGCAGAAAGCGATAATCCAACAAACGGACTACGCTAACGTGGGTGAGATCGCTAATGTGCG
CATTCTGCCATTGGGCACGGATAATTTTGGACGTGACGTACTGACCCAACTGGTGACAGCTACGGCGGTTTCTCTGGTAA
TCGGACTGGTTGCAGGATTGATTGCTACTACCATCGGCCTGACATTAGGGCTACTGGCAGGATATATTGGTGGGCTAGTT
GATGACATGATCATGTTCTTAACCAACTTATTTACCGTTATTCCCACGTTTGTGCTGCTCATTCTCATTTCGTTCAGTAT
TGGTCAGGATCAGCGCGGAGCAATTACCATTGCTGCTGTAATTGGCTTGACCTCGTGGGTGTGGACAGCCAGAGCTGTAC
GGTCGCAGGTACTTTCCCTGCGTAATCGTGATCATGTCAATTTATCGAAACTCTCCGGCCATTCGGTGCCTCGTATCATT
CTGACCGATATTCTGCCCTACATTGCCTCATATGTAGTGATGGCATTCATCCTGCAAGTCTCATCGGGCATTTTAGCAGA
GGCAGGTCTATCTATCCTGGGTCTTGGTCCACGCACTACCGAAACACCGACCTTGGGGTTGATGATGAACTGGGCCATGA
TTTATCAGGCGCATATTCTAGGCAAATGGTGGGCCTATCTGCCGGTGCTCGTGACAATTGCATTGATCTCCTTCTCGATG
AATCTGATGAACACTGGTCTTGATCAGGTTTTCAACCCTGCTTTGAGAGATTGA

Upstream 100 bases:

>100_bases
CATTTATGGTATTGACCGCCAACTTTATCCTCGAAATTTTATATGGCGTGATCGACCCGCGTATAAAGGCGGCTCAGTCT
GATTGAGAGGATAAGTGCTT

Downstream 100 bases:

>100_bases
GTAAAGCGATGGGAAAAGTCATGCTTGAGGTCCGTGACCTCACTACCAAATATGTCACCCGCTACAAGGAAGACGTCTAT
GCCGTTGACCGCGTATCGCT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MQHTLRQVFRSGKFVVGFTILMTILLIVIVYPLIVRHPPLQIIGQGTFFPPGIYVSVYDAVNSPVLYTLNLEDAAVKRIE
NRLRQEDRVAMKEWLVAFGVPAEEIDTNDTEKLLALWEANYDPNLRLEGMTFARQRYFQRVDAALEGLLSTEPAIIAVPN
SATGALEQKAIIQQTDYANVGEIANVRILPLGTDNFGRDVLTQLVTATAVSLVIGLVAGLIATTIGLTLGLLAGYIGGLV
DDMIMFLTNLFTVIPTFVLLILISFSIGQDQRGAITIAAVIGLTSWVWTARAVRSQVLSLRNRDHVNLSKLSGHSVPRII
LTDILPYIASYVVMAFILQVSSGILAEAGLSILGLGPRTTETPTLGLMMNWAMIYQAHILGKWWAYLPVLVTIALISFSM
NLMNTGLDQVFNPALRD

Sequences:

>Translated_417_residues
MQHTLRQVFRSGKFVVGFTILMTILLIVIVYPLIVRHPPLQIIGQGTFFPPGIYVSVYDAVNSPVLYTLNLEDAAVKRIE
NRLRQEDRVAMKEWLVAFGVPAEEIDTNDTEKLLALWEANYDPNLRLEGMTFARQRYFQRVDAALEGLLSTEPAIIAVPN
SATGALEQKAIIQQTDYANVGEIANVRILPLGTDNFGRDVLTQLVTATAVSLVIGLVAGLIATTIGLTLGLLAGYIGGLV
DDMIMFLTNLFTVIPTFVLLILISFSIGQDQRGAITIAAVIGLTSWVWTARAVRSQVLSLRNRDHVNLSKLSGHSVPRII
LTDILPYIASYVVMAFILQVSSGILAEAGLSILGLGPRTTETPTLGLMMNWAMIYQAHILGKWWAYLPVLVTIALISFSM
NLMNTGLDQVFNPALRD
>Mature_417_residues
MQHTLRQVFRSGKFVVGFTILMTILLIVIVYPLIVRHPPLQIIGQGTFFPPGIYVSVYDAVNSPVLYTLNLEDAAVKRIE
NRLRQEDRVAMKEWLVAFGVPAEEIDTNDTEKLLALWEANYDPNLRLEGMTFARQRYFQRVDAALEGLLSTEPAIIAVPN
SATGALEQKAIIQQTDYANVGEIANVRILPLGTDNFGRDVLTQLVTATAVSLVIGLVAGLIATTIGLTLGLLAGYIGGLV
DDMIMFLTNLFTVIPTFVLLILISFSIGQDQRGAITIAAVIGLTSWVWTARAVRSQVLSLRNRDHVNLSKLSGHSVPRII
LTDILPYIASYVVMAFILQVSSGILAEAGLSILGLGPRTTETPTLGLMMNWAMIYQAHILGKWWAYLPVLVTIALISFSM
NLMNTGLDQVFNPALRD

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=229, Percent_Identity=30.5676855895196, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1789889, Length=226, Percent_Identity=34.070796460177, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1789964, Length=249, Percent_Identity=29.3172690763052, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1787760, Length=233, Percent_Identity=27.8969957081545, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1787498, Length=301, Percent_Identity=29.5681063122924, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1788505, Length=211, Percent_Identity=31.7535545023697, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 45792; Mature: 45792

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHTLRQVFRSGKFVVGFTILMTILLIVIVYPLIVRHPPLQIIGQGTFFPPGIYVSVYDA
CCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCEEEEECC
VNSPVLYTLNLEDAAVKRIENRLRQEDRVAMKEWLVAFGVPAEEIDTNDTEKLLALWEAN
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHCC
YDPNLRLEGMTFARQRYFQRVDAALEGLLSTEPAIIAVPNSATGALEQKAIIQQTDYANV
CCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCC
GEIANVRILPLGTDNFGRDVLTQLVTATAVSLVIGLVAGLIATTIGLTLGLLAGYIGGLV
CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDMIMFLTNLFTVIPTFVLLILISFSIGQDQRGAITIAAVIGLTSWVWTARAVRSQVLSL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RNRDHVNLSKLSGHSVPRIILTDILPYIASYVVMAFILQVSSGILAEAGLSILGLGPRTT
HCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEECCCCCC
ETPTLGLMMNWAMIYQAHILGKWWAYLPVLVTIALISFSMNLMNTGLDQVFNPALRD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHCCC
>Mature Secondary Structure
MQHTLRQVFRSGKFVVGFTILMTILLIVIVYPLIVRHPPLQIIGQGTFFPPGIYVSVYDA
CCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCEEEEECC
VNSPVLYTLNLEDAAVKRIENRLRQEDRVAMKEWLVAFGVPAEEIDTNDTEKLLALWEAN
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHCC
YDPNLRLEGMTFARQRYFQRVDAALEGLLSTEPAIIAVPNSATGALEQKAIIQQTDYANV
CCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCC
GEIANVRILPLGTDNFGRDVLTQLVTATAVSLVIGLVAGLIATTIGLTLGLLAGYIGGLV
CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDMIMFLTNLFTVIPTFVLLILISFSIGQDQRGAITIAAVIGLTSWVWTARAVRSQVLSL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RNRDHVNLSKLSGHSVPRIILTDILPYIASYVVMAFILQVSSGILAEAGLSILGLGPRTT
HCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEECCCCCC
ETPTLGLMMNWAMIYQAHILGKWWAYLPVLVTIALISFSMNLMNTGLDQVFNPALRD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]