Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222524480

Identifier: 222524480

GI number: 222524480

Start: 1534278

End: 1535057

Strand: Direct

Name: 222524480

Synonym: Chy400_1204

Alternate gene names: NA

Gene position: 1534278-1535057 (Clockwise)

Preceding gene: 222524479

Following gene: 222524482

Centisome position: 29.12

GC content: 51.67

Gene sequence:

>780_bases
ATGATCCGAACCGGTAAACAAGCTATACTCCTGACCGGCTTCACCTTACTTGAGTATTTGCGCTCTGGCCGGTTCTTTCT
CGAATTGACCATCGTGATTGCCAGTTATGTTGTATTCCTGCGCCCTACCGGAACCCCAATGAATGCCGGCTATCTGTTTA
CTGTGGCAGGCATCTTTGGACCAGTTCTGGCCATTCTGAGTACCGGTTTTATGATCGGCCTGGGTGATCGCCCCCAGGGC
TACATTATCCTGTCGCACAACGTCAGTCGTGGTGCGTATCTGATCGGGCTATTTTACGCTGCCTGTCTTGTTGTACTGGT
TATGTACGGAATACTCTGCCTGCTGGTAGCCCTGACAAATCGAGTGGTTGATCTCGATCTCATTGGCTGGTTCCTGGCCA
GCTTACCGCTTATTCTCAATATCGGGTTGTTCTCCGCCCTGACGATCTTACTTTCGCCTCTGGTGTTGGGTACTGGCTGG
CGTTTGTTCGTGCTTGCCCTGATTGCATTGGCACTATCGAGTAACGTGATCGGCGGCCCAATCATCAATCAACTCGAGGA
GATCAATCCCTTTTTGGTTACGATCTTACGCGCCGTGCAAACCGTGTTGAGTGGGCCACTGGTTCCAATCTTTTACGGCT
ACCAGATTAGCATCAGCGGTAGTTTCAGTGAGGTCTCGGTCTGGGCTAACCTGGTCGCGCAGAGTTCACTCTTACTGGCA
TTTCTAGGACTGGCCCGCTATGCGTTTAACCAGCGTGACCTGATCTTCAGCGTGTCGTAG

Upstream 100 bases:

>100_bases
ACGAAGCCATCAATCCGGCACCAACTGATGACATTGATCCGCTCTTGAAACGATTGCTGCAACGGCGAGAGGGCGACTCC
AGACAAAAGGATGGCCACCA

Downstream 100 bases:

>100_bases
CATCAGTCACCGGCACGAACGCCACCGCGTCAGCCCAGATACCACGTCGGCGATCACCGGCAATGGTACCGGTCGCAACC
AGCGGTGAGGATGCCGGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MIRTGKQAILLTGFTLLEYLRSGRFFLELTIVIASYVVFLRPTGTPMNAGYLFTVAGIFGPVLAILSTGFMIGLGDRPQG
YIILSHNVSRGAYLIGLFYAACLVVLVMYGILCLLVALTNRVVDLDLIGWFLASLPLILNIGLFSALTILLSPLVLGTGW
RLFVLALIALALSSNVIGGPIINQLEEINPFLVTILRAVQTVLSGPLVPIFYGYQISISGSFSEVSVWANLVAQSSLLLA
FLGLARYAFNQRDLIFSVS

Sequences:

>Translated_259_residues
MIRTGKQAILLTGFTLLEYLRSGRFFLELTIVIASYVVFLRPTGTPMNAGYLFTVAGIFGPVLAILSTGFMIGLGDRPQG
YIILSHNVSRGAYLIGLFYAACLVVLVMYGILCLLVALTNRVVDLDLIGWFLASLPLILNIGLFSALTILLSPLVLGTGW
RLFVLALIALALSSNVIGGPIINQLEEINPFLVTILRAVQTVLSGPLVPIFYGYQISISGSFSEVSVWANLVAQSSLLLA
FLGLARYAFNQRDLIFSVS
>Mature_259_residues
MIRTGKQAILLTGFTLLEYLRSGRFFLELTIVIASYVVFLRPTGTPMNAGYLFTVAGIFGPVLAILSTGFMIGLGDRPQG
YIILSHNVSRGAYLIGLFYAACLVVLVMYGILCLLVALTNRVVDLDLIGWFLASLPLILNIGLFSALTILLSPLVLGTGW
RLFVLALIALALSSNVIGGPIINQLEEINPFLVTILRAVQTVLSGPLVPIFYGYQISISGSFSEVSVWANLVAQSSLLLA
FLGLARYAFNQRDLIFSVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28040; Mature: 28040

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTGKQAILLTGFTLLEYLRSGRFFLELTIVIASYVVFLRPTGTPMNAGYLFTVAGIFG
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
PVLAILSTGFMIGLGDRPQGYIILSHNVSRGAYLIGLFYAACLVVLVMYGILCLLVALTN
HHHHHHHCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVVDLDLIGWFLASLPLILNIGLFSALTILLSPLVLGTGWRLFVLALIALALSSNVIGGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCH
IINQLEEINPFLVTILRAVQTVLSGPLVPIFYGYQISISGSFSEVSVWANLVAQSSLLLA
HHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHH
FLGLARYAFNQRDLIFSVS
HHHHHHHHCCCCCEEEEEC
>Mature Secondary Structure
MIRTGKQAILLTGFTLLEYLRSGRFFLELTIVIASYVVFLRPTGTPMNAGYLFTVAGIFG
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
PVLAILSTGFMIGLGDRPQGYIILSHNVSRGAYLIGLFYAACLVVLVMYGILCLLVALTN
HHHHHHHCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVVDLDLIGWFLASLPLILNIGLFSALTILLSPLVLGTGWRLFVLALIALALSSNVIGGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCH
IINQLEEINPFLVTILRAVQTVLSGPLVPIFYGYQISISGSFSEVSVWANLVAQSSLLLA
HHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHH
FLGLARYAFNQRDLIFSVS
HHHHHHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA