| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524465
Identifier: 222524465
GI number: 222524465
Start: 1510356
End: 1510871
Strand: Direct
Name: 222524465
Synonym: Chy400_1189
Alternate gene names: NA
Gene position: 1510356-1510871 (Clockwise)
Preceding gene: 222524450
Following gene: 222524467
Centisome position: 28.67
GC content: 59.11
Gene sequence:
>516_bases GTGAGAAGCGGCTTAAAGATCAACCAGACTAGAACTTATTTCATTAAGCTGTGCTATCGTTCTCCCAGACGCATGAACGC TTGCCAATCACCAACGACAGCCTGCCCTGCTCCTGGCCCGTTGGCAGAGGGTCGGGCCATCACGCGCTGGATGGGGTACC TTGCCCGCTCGGCATGCGCGTGTCGCGACGTTTGGAGTACGGCAGTCATGCTGCCGCAGCAGCTGTGCTCACGATCCGGC ACGTGGCACGCCGTTGACCCTACCGGTCAGGTGGATGCCAGGTATGCTCGTTACGATCATAGCGTTGGTCAGGAATCCTT GCCAAAGCCGGGGGTGACGAAAACGCATGTCGTACCCGTTCAGCAGGGTGATCGGTGCGACACGCGCCGGTGGGTGCGGA AGTCTGCCTTCCGCACGCCAAACCACAGCACACACCCATCATGGAGAATAAGGTGGATGGAAGACATCGCCTCTACCTCC CTTGCCGGTGTGCCGAACACAGGGAATGCTGTCTGA
Upstream 100 bases:
>100_bases TGATCGATTAATTACTCTCGTACTGGACGGGGAATATCCAAAAATTATTATAACGAAGTTTGAAAGATCGCGCAAATACT TTGTGGAATAGTGGAATGGT
Downstream 100 bases:
>100_bases GGCACGTTGTCCCTTTCGCTGGCACAGCCTGACGCGATAAGTTTACACAATGTGGGTTCCGCCACCATTCAATGCCTGAC TCACACACGCCGGAATCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MRSGLKINQTRTYFIKLCYRSPRRMNACQSPTTACPAPGPLAEGRAITRWMGYLARSACACRDVWSTAVMLPQQLCSRSG TWHAVDPTGQVDARYARYDHSVGQESLPKPGVTKTHVVPVQQGDRCDTRRWVRKSAFRTPNHSTHPSWRIRWMEDIASTS LAGVPNTGNAV
Sequences:
>Translated_171_residues MRSGLKINQTRTYFIKLCYRSPRRMNACQSPTTACPAPGPLAEGRAITRWMGYLARSACACRDVWSTAVMLPQQLCSRSG TWHAVDPTGQVDARYARYDHSVGQESLPKPGVTKTHVVPVQQGDRCDTRRWVRKSAFRTPNHSTHPSWRIRWMEDIASTS LAGVPNTGNAV >Mature_171_residues MRSGLKINQTRTYFIKLCYRSPRRMNACQSPTTACPAPGPLAEGRAITRWMGYLARSACACRDVWSTAVMLPQQLCSRSG TWHAVDPTGQVDARYARYDHSVGQESLPKPGVTKTHVVPVQQGDRCDTRRWVRKSAFRTPNHSTHPSWRIRWMEDIASTS LAGVPNTGNAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19130; Mature: 19130
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSGLKINQTRTYFIKLCYRSPRRMNACQSPTTACPAPGPLAEGRAITRWMGYLARSACA CCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH CRDVWSTAVMLPQQLCSRSGTWHAVDPTGQVDARYARYDHSVGQESLPKPGVTKTHVVPV HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCHHCCCCCCCCCEEEEEC QQGDRCDTRRWVRKSAFRTPNHSTHPSWRIRWMEDIASTSLAGVPNTGNAV CCCCCCHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRSGLKINQTRTYFIKLCYRSPRRMNACQSPTTACPAPGPLAEGRAITRWMGYLARSACA CCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH CRDVWSTAVMLPQQLCSRSGTWHAVDPTGQVDARYARYDHSVGQESLPKPGVTKTHVVPV HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCHHCCCCCCCCCEEEEEC QQGDRCDTRRWVRKSAFRTPNHSTHPSWRIRWMEDIASTSLAGVPNTGNAV CCCCCCHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA