| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222524407
Identifier: 222524407
GI number: 222524407
Start: 1429654
End: 1431585
Strand: Reverse
Name: 222524407
Synonym: Chy400_1131
Alternate gene names: NA
Gene position: 1431585-1429654 (Counterclockwise)
Preceding gene: 222524410
Following gene: 222524404
Centisome position: 27.17
GC content: 55.64
Gene sequence:
>1932_bases ATGAAGCGATGGCTATGGCCTTCATCAGCCGACATCTGGTTGATGATCGGTGTGATGTGTATGGGGATAGTCTGCGCCGG TATATCCAGTCTGGTTCCACCGATGGGTATTCTCGATATTGGTACCACGTATGCCCAGCCCTACCTGGAAGGATTTCATG GTCTGGAGCGGAATCCGCAGTTCTCGTATTCTTTTACGAAAGAGCAGGCGATAGTCACATTTCCTGGCATTGGTTCCAGT TGGACAACACTCGTCATGCGTGCAAACGGGTATCGGCCAGAGGGAATTCCACCGGCAGAACTATTTCTGGCAACCAGTGA AACCGAGCCGATTCGGTTGCAACTGCGCAGCGATCCTGCGCGCTACTATCTCCTCTTGCCGCCAGGGGATGATGATTTGC GCATACAATTGACCAGCACGACCTTCACCACACCGACTGATCCCCGACGGCTGGGGGTGGCGATTGACTGGATTGCCGCA TATCAATTGGCATACGGCTGGCCGTTTTGGCAGGCATTGTATCTGGCGCTGATCGGTGGTTTGGGCTACTGGTTATTGCG CCGGGTAGCGGTTGAGCGCCAGCCTGCGACGGTTATCACGCTTGCAGCACTCATCACACTGGGTGGCCTGCTGGCATCGT TTCGCATCTGGTGGGCCATCTTTACCCCAATGCTGGTTGGGTTGCTGGTGGGATTACACCTTTGTTTAGGGCCACTCCGG GCTTTCACCCGCTTCGCCTTCGCCCGTGGCGGCGAAACGCTCCCTCAATGGCACGAGACGTGGCTCTGGCGGATTGTGTT GCTGGCGGCATTGATCAAGATCGGTGGCGTGATTTACCCGCAAACAATTGTGTATGATGAACGCTGGCACGTCCCGCGCA CTCAAATGGTACTCGATGGCCGGTTTCTGGAGCTGGTGGTACCGAGTCGAGTAACGCTGTTGGGTGATACCGTGGGCTTT GAGGGAGGGCATTTTCCGTATTCACCTCTCTGGTATCTGATTACAGCGCCGTTTGGCCTGATCGGTATTGATCTGGGTCT GGCATCGAACGTTTTGAACACAGCTCTTGACGTATCCCGGAGTCTACTCATCGCCTACATTGCCCTTCGCCTGTTTGGAC GTCCGGGGCTGGCCGTAATAGCCGCCGGTTGTTATCATCTGCTGCTGATGCCCTATTTTCTGATTTCGTGGGGCAACTGG CCGACCCAACTGGGACTTTGGGGGACCCTGGTCTTGATTGCGGTTGTGCTGGCTTACGATGATCGACCTGAAGAGCGGCG GGCATTGTGGGGGGTTGCCGCTGCCGCAGCCCTGGCAATGCTGACCTACACTGTTGTGGGGATTATGGCCTTTACAATGA TGGGCATCTATGCACTGTTTGAACTGGTTCGTCGCGAAACACTGGCGCGTCATCGGGGCAGGCTGATCTTATTGGGGCTG GCAATTGCCGAGGGAGCGGCATTTCTCATTTACCACATGTGGTATGTACCGGTGATTGTAGCCGAAACTATACCTGCCAT CGGTGCAGCGCTCGGTCAGCGGGTGGGTCGCGCCGATGCACCACCGTTACCGACACCACTGATTGATGGCGCTTTTATGC TTAATCATCTGACCTGGCCGGGCATTTTGCTGATCCTCGGCGGTGCGGTGCTGGTCTGGTCGGCAGCGCGTCGCGCCCAC GGTCTGCTCATCGGCTGGTGGGCTGTGCTTCTGCTTTACTCACTGGTGAGCTGGAATATTGCCGACATGATTCTGAAGCA GGTCTTCTTTATGTTGCCGCTGGCCGCTCTCTGTATGGCACTGGCCATCGATTGGCTCTGGCGCCAGCATTGGATCGGGA AGACGGCGGTTGTCTTATCATTTGTTTACCTCTCACTGCGACTTGCCGACCGCTGGTATGAATACATTATGGTGAAGCGT CATATTGGGTAA
Upstream 100 bases:
>100_bases GCGGGTTAGCAGATCACAACATTGATCTGCTCTGGTAGTATAGCACAGGAAGTGGTCGAAAACAGGGGTAGACTGTTGGA TTTGTGTTAATGGAGATATT
Downstream 100 bases:
>100_bases CGGTACCGTTCGGTAGGTGGTGGGAGAAAAGAGAAAATAGGAAATAGGAGAGAGGAAATAGGATATACAGCAGGAGGGAG CGCTGGGGGTGAACAAGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 643; Mature: 643
Protein sequence:
>643_residues MKRWLWPSSADIWLMIGVMCMGIVCAGISSLVPPMGILDIGTTYAQPYLEGFHGLERNPQFSYSFTKEQAIVTFPGIGSS WTTLVMRANGYRPEGIPPAELFLATSETEPIRLQLRSDPARYYLLLPPGDDDLRIQLTSTTFTTPTDPRRLGVAIDWIAA YQLAYGWPFWQALYLALIGGLGYWLLRRVAVERQPATVITLAALITLGGLLASFRIWWAIFTPMLVGLLVGLHLCLGPLR AFTRFAFARGGETLPQWHETWLWRIVLLAALIKIGGVIYPQTIVYDERWHVPRTQMVLDGRFLELVVPSRVTLLGDTVGF EGGHFPYSPLWYLITAPFGLIGIDLGLASNVLNTALDVSRSLLIAYIALRLFGRPGLAVIAAGCYHLLLMPYFLISWGNW PTQLGLWGTLVLIAVVLAYDDRPEERRALWGVAAAAALAMLTYTVVGIMAFTMMGIYALFELVRRETLARHRGRLILLGL AIAEGAAFLIYHMWYVPVIVAETIPAIGAALGQRVGRADAPPLPTPLIDGAFMLNHLTWPGILLILGGAVLVWSAARRAH GLLIGWWAVLLLYSLVSWNIADMILKQVFFMLPLAALCMALAIDWLWRQHWIGKTAVVLSFVYLSLRLADRWYEYIMVKR HIG
Sequences:
>Translated_643_residues MKRWLWPSSADIWLMIGVMCMGIVCAGISSLVPPMGILDIGTTYAQPYLEGFHGLERNPQFSYSFTKEQAIVTFPGIGSS WTTLVMRANGYRPEGIPPAELFLATSETEPIRLQLRSDPARYYLLLPPGDDDLRIQLTSTTFTTPTDPRRLGVAIDWIAA YQLAYGWPFWQALYLALIGGLGYWLLRRVAVERQPATVITLAALITLGGLLASFRIWWAIFTPMLVGLLVGLHLCLGPLR AFTRFAFARGGETLPQWHETWLWRIVLLAALIKIGGVIYPQTIVYDERWHVPRTQMVLDGRFLELVVPSRVTLLGDTVGF EGGHFPYSPLWYLITAPFGLIGIDLGLASNVLNTALDVSRSLLIAYIALRLFGRPGLAVIAAGCYHLLLMPYFLISWGNW PTQLGLWGTLVLIAVVLAYDDRPEERRALWGVAAAAALAMLTYTVVGIMAFTMMGIYALFELVRRETLARHRGRLILLGL AIAEGAAFLIYHMWYVPVIVAETIPAIGAALGQRVGRADAPPLPTPLIDGAFMLNHLTWPGILLILGGAVLVWSAARRAH GLLIGWWAVLLLYSLVSWNIADMILKQVFFMLPLAALCMALAIDWLWRQHWIGKTAVVLSFVYLSLRLADRWYEYIMVKR HIG >Mature_643_residues MKRWLWPSSADIWLMIGVMCMGIVCAGISSLVPPMGILDIGTTYAQPYLEGFHGLERNPQFSYSFTKEQAIVTFPGIGSS WTTLVMRANGYRPEGIPPAELFLATSETEPIRLQLRSDPARYYLLLPPGDDDLRIQLTSTTFTTPTDPRRLGVAIDWIAA YQLAYGWPFWQALYLALIGGLGYWLLRRVAVERQPATVITLAALITLGGLLASFRIWWAIFTPMLVGLLVGLHLCLGPLR AFTRFAFARGGETLPQWHETWLWRIVLLAALIKIGGVIYPQTIVYDERWHVPRTQMVLDGRFLELVVPSRVTLLGDTVGF EGGHFPYSPLWYLITAPFGLIGIDLGLASNVLNTALDVSRSLLIAYIALRLFGRPGLAVIAAGCYHLLLMPYFLISWGNW PTQLGLWGTLVLIAVVLAYDDRPEERRALWGVAAAAALAMLTYTVVGIMAFTMMGIYALFELVRRETLARHRGRLILLGL AIAEGAAFLIYHMWYVPVIVAETIPAIGAALGQRVGRADAPPLPTPLIDGAFMLNHLTWPGILLILGGAVLVWSAARRAH GLLIGWWAVLLLYSLVSWNIADMILKQVFFMLPLAALCMALAIDWLWRQHWIGKTAVVLSFVYLSLRLADRWYEYIMVKR HIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71755; Mature: 71755
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRWLWPSSADIWLMIGVMCMGIVCAGISSLVPPMGILDIGTTYAQPYLEGFHGLERNPQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHCCCCCCCC FSYSFTKEQAIVTFPGIGSSWTTLVMRANGYRPEGIPPAELFLATSETEPIRLQLRSDPA CCEEECCCCEEEEECCCCCCHHEEEEECCCCCCCCCCHHHEEEEECCCCCEEEEEECCCC RYYLLLPPGDDDLRIQLTSTTFTTPTDPRRLGVAIDWIAAYQLAYGWPFWQALYLALIGG EEEEEECCCCCCEEEEEEECEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LGYWLLRRVAVERQPATVITLAALITLGGLLASFRIWWAIFTPMLVGLLVGLHLCLGPLR HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFTRFAFARGGETLPQWHETWLWRIVLLAALIKIGGVIYPQTIVYDERWHVPRTQMVLDG HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCEEEECCCCCCCCHHHEECC RFLELVVPSRVTLLGDTVGFEGGHFPYSPLWYLITAPFGLIGIDLGLASNVLNTALDVSR CEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH SLLIAYIALRLFGRPGLAVIAAGCYHLLLMPYFLISWGNWPTQLGLWGTLVLIAVVLAYD HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC DRPEERRALWGVAAAAALAMLTYTVVGIMAFTMMGIYALFELVRRETLARHRGRLILLGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE AIAEGAAFLIYHMWYVPVIVAETIPAIGAALGQRVGRADAPPLPTPLIDGAFMLNHLTWP HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHH GILLILGGAVLVWSAARRAHGLLIGWWAVLLLYSLVSWNIADMILKQVFFMLPLAALCMA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LAIDWLWRQHWIGKTAVVLSFVYLSLRLADRWYEYIMVKRHIG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRWLWPSSADIWLMIGVMCMGIVCAGISSLVPPMGILDIGTTYAQPYLEGFHGLERNPQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHCCCCCCCC FSYSFTKEQAIVTFPGIGSSWTTLVMRANGYRPEGIPPAELFLATSETEPIRLQLRSDPA CCEEECCCCEEEEECCCCCCHHEEEEECCCCCCCCCCHHHEEEEECCCCCEEEEEECCCC RYYLLLPPGDDDLRIQLTSTTFTTPTDPRRLGVAIDWIAAYQLAYGWPFWQALYLALIGG EEEEEECCCCCCEEEEEEECEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LGYWLLRRVAVERQPATVITLAALITLGGLLASFRIWWAIFTPMLVGLLVGLHLCLGPLR HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFTRFAFARGGETLPQWHETWLWRIVLLAALIKIGGVIYPQTIVYDERWHVPRTQMVLDG HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCEEEECCCCCCCCHHHEECC RFLELVVPSRVTLLGDTVGFEGGHFPYSPLWYLITAPFGLIGIDLGLASNVLNTALDVSR CEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH SLLIAYIALRLFGRPGLAVIAAGCYHLLLMPYFLISWGNWPTQLGLWGTLVLIAVVLAYD HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC DRPEERRALWGVAAAAALAMLTYTVVGIMAFTMMGIYALFELVRRETLARHRGRLILLGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE AIAEGAAFLIYHMWYVPVIVAETIPAIGAALGQRVGRADAPPLPTPLIDGAFMLNHLTWP HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHH GILLILGGAVLVWSAARRAHGLLIGWWAVLLLYSLVSWNIADMILKQVFFMLPLAALCMA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LAIDWLWRQHWIGKTAVVLSFVYLSLRLADRWYEYIMVKRHIG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA