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The map label for this gene is ctaB [H]

Identifier: 222524380

GI number: 222524380

Start: 1398232

End: 1399200

Strand: Reverse

Name: ctaB [H]

Synonym: Chy400_1104

Alternate gene names: 222524380

Gene position: 1399200-1398232 (Counterclockwise)

Preceding gene: 222524382

Following gene: 222524379

Centisome position: 26.56

GC content: 57.17

Gene sequence:

>969_bases
ATGGATCCCCGGCATCGTGCCTTTGTCAATTTTGCATGGCTCAATGTTGGATACAACCTGTTGGTAATTATGTGGGGCGC
ATTCGTGCGGGCAACCGGCTCTGGTGCCGGTTGTGGCGATCACTGGCCGCTCTGTGACGGTCAGGTGATACCGCGGTCAC
CCGATACTGCTCAGCTCATCGAGTTTTCTCATCGCGTAACGAGTGGCATTGCCCTGCTGTTGACGATAGGGTTACTGGTT
TGGGCCTTACGACTGTTTGCTGCCGGCCATCCGGCACGGCGGGCGGCGATTGCAACGATGATATTTATGATTGTCGAGTC
GCTGATCGGAGCAGCACTGGTGCTCTTCCGACTGGTAGCTCACGATGCATCACTGACGCGCGCCTTATCATTGGGACTGC
ACCTCGTCAATACATTTCTGCTGATTGGAGCAATGGCGCTTACGGCCTGGTACGCCAGTGGTAAGCCAGCTCCTGACCTG
CGTGGTAAAGGTGGTCTGTTAAGTATGTTGATCGCAGCGTTGGTCGGCACGGCATTGGTAGGCTCGAGTGGTGCAATAAC
GGCTCTGGGTGACACCCTCTTGCAATTGGGCGTGCTGCCTGGCGGTGTATCGCAGTCGATCACTCGTGATAGTCATCCCC
TGGTATGGATGCGAATTATCCACCCGGTCTTGGGCACACTGGTTGGCCTGGCAATGATTTCGCTTGCCCAACGGGCAGTG
CGCTACGATCCGTCACCAACAACGCGCCGACTGGCGTGGGCTACTGCTGCGATCTTTGTTGGTCAGATTTTTCTGGGTGC
AATAAACGTTATCCTGAAGGCTCCGGTGTGGATGCAACTGGTGCATCTGCTCTTCGCCGATCTGGCATGGCTGGCGCTGG
TGTTGCTAAGCGCAACTCTCCTCGCTCGGCCCGGCGAGGAACGTGTCCCACAGCCGGTGTCCGTCTCGTCACCGGCACGC
TCTGCGTAG

Upstream 100 bases:

>100_bases
GTTCACTGCACGCTACGCGAGGGTCATGCTAGAATGAAGTGCGAAATGTCACATAGTTCTTGCAATCCGCGCCAACACGG
TCGCGGCGGGAGGAAGTTGC

Downstream 100 bases:

>100_bases
GACAGGCCGCACAGATCAGCTCTCGAGCGGAAGAAGGGTAACTGCACAGTGTTACCCTTCTTTCTTTTTCCGAAGGGATG
AGGTTTACGGGATGTTCCAA

Product: cytochrome oxidase assembly

Products: NA

Alternate protein names: Heme B farnesyltransferase; Heme O synthase [H]

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MDPRHRAFVNFAWLNVGYNLLVIMWGAFVRATGSGAGCGDHWPLCDGQVIPRSPDTAQLIEFSHRVTSGIALLLTIGLLV
WALRLFAAGHPARRAAIATMIFMIVESLIGAALVLFRLVAHDASLTRALSLGLHLVNTFLLIGAMALTAWYASGKPAPDL
RGKGGLLSMLIAALVGTALVGSSGAITALGDTLLQLGVLPGGVSQSITRDSHPLVWMRIIHPVLGTLVGLAMISLAQRAV
RYDPSPTTRRLAWATAAIFVGQIFLGAINVILKAPVWMQLVHLLFADLAWLALVLLSATLLARPGEERVPQPVSVSSPAR
SA

Sequences:

>Translated_322_residues
MDPRHRAFVNFAWLNVGYNLLVIMWGAFVRATGSGAGCGDHWPLCDGQVIPRSPDTAQLIEFSHRVTSGIALLLTIGLLV
WALRLFAAGHPARRAAIATMIFMIVESLIGAALVLFRLVAHDASLTRALSLGLHLVNTFLLIGAMALTAWYASGKPAPDL
RGKGGLLSMLIAALVGTALVGSSGAITALGDTLLQLGVLPGGVSQSITRDSHPLVWMRIIHPVLGTLVGLAMISLAQRAV
RYDPSPTTRRLAWATAAIFVGQIFLGAINVILKAPVWMQLVHLLFADLAWLALVLLSATLLARPGEERVPQPVSVSSPAR
SA
>Mature_322_residues
MDPRHRAFVNFAWLNVGYNLLVIMWGAFVRATGSGAGCGDHWPLCDGQVIPRSPDTAQLIEFSHRVTSGIALLLTIGLLV
WALRLFAAGHPARRAAIATMIFMIVESLIGAALVLFRLVAHDASLTRALSLGLHLVNTFLLIGAMALTAWYASGKPAPDL
RGKGGLLSMLIAALVGTALVGSSGAITALGDTLLQLGVLPGGVSQSITRDSHPLVWMRIIHPVLGTLVGLAMISLAQRAV
RYDPSPTTRRLAWATAAIFVGQIFLGAINVILKAPVWMQLVHLLFADLAWLALVLLSATLLARPGEERVPQPVSVSSPAR
SA

Specific function: Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group [H]

COG id: COG1612

COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the ubiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003780
- InterPro:   IPR006369
- InterPro:   IPR000537 [H]

Pfam domain/function: PF02628 COX15-CtaA; PF01040 UbiA [H]

EC number: NA

Molecular weight: Translated: 34184; Mature: 34184

Theoretical pI: Translated: 11.23; Mature: 11.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPRHRAFVNFAWLNVGYNLLVIMWGAFVRATGSGAGCGDHWPLCDGQVIPRSPDTAQLI
CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCHHHHH
EFSHRVTSGIALLLTIGLLVWALRLFAAGHPARRAAIATMIFMIVESLIGAALVLFRLVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HDASLTRALSLGLHLVNTFLLIGAMALTAWYASGKPAPDLRGKGGLLSMLIAALVGTALV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
GSSGAITALGDTLLQLGVLPGGVSQSITRDSHPLVWMRIIHPVLGTLVGLAMISLAQRAV
CCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYDPSPTTRRLAWATAAIFVGQIFLGAINVILKAPVWMQLVHLLFADLAWLALVLLSATL
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
LARPGEERVPQPVSVSSPARSA
HCCCCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MDPRHRAFVNFAWLNVGYNLLVIMWGAFVRATGSGAGCGDHWPLCDGQVIPRSPDTAQLI
CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCHHHHH
EFSHRVTSGIALLLTIGLLVWALRLFAAGHPARRAAIATMIFMIVESLIGAALVLFRLVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HDASLTRALSLGLHLVNTFLLIGAMALTAWYASGKPAPDLRGKGGLLSMLIAALVGTALV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
GSSGAITALGDTLLQLGVLPGGVSQSITRDSHPLVWMRIIHPVLGTLVGLAMISLAQRAV
CCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYDPSPTTRRLAWATAAIFVGQIFLGAINVILKAPVWMQLVHLLFADLAWLALVLLSATL
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
LARPGEERVPQPVSVSSPARSA
HCCCCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA