| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524372
Identifier: 222524372
GI number: 222524372
Start: 1390900
End: 1391706
Strand: Reverse
Name: 222524372
Synonym: Chy400_1096
Alternate gene names: NA
Gene position: 1391706-1390900 (Counterclockwise)
Preceding gene: 222524373
Following gene: 222524371
Centisome position: 26.41
GC content: 56.88
Gene sequence:
>807_bases ATGATGTCAACCCCACGCGCTCAACGTATAGCAACCCTCGCAGGTGATGTTGTCTTCGGTCTGATCTGCCTGCTCGGTGT GATAGCTTTTCTCTACCCCTTTTTTCTGGGCCGTGCCGAAACCGGATTCACCCAGGCACATGCCACCACAGCCCCGATCT TTTTCGCCCTTCTCGGCCCGGCACTGCTTGTCCTGTTAATTGCCGAACTCAGTGCCGGTCGGCTCAATACCCGTATGGTC GCTATTTTGGGTGTGCTCACAGGGGTCGTAGCGATCTTGCGTCTACCGGCGGGGCCGGCAGACTCGCCTACGTTCTTTTT TCTAATCATCCTGATTGGCTATGCGTATGGATCGCGTTTCGGCTTTCTGATTGGCACCCTGGCCCTGCTGGTCTCGGCAC TACTGACCGGGGGCGTAGGCCCGTGGTTGCCGTTTCAGATGTTCGTGAGTGGCTGGATGGGCATGAGCGCCGGTTTTTTG GCACCACTGGGACGACGATTCCGTCCTGGGGGATGGGGCGAGGTTGTGCTTCTTGGCGGTTTTGGTTACGTTTGGGGCTT TCTCTTTGGTGCCTTGATGAATCTGTGGTTTTGGCCGTTTGCGCCGCCCGGCGAATTGGGCTGGCTACCGGGCAGTGGTC TGGCGGCAACAATTCAGCAATATCTCCGCTTCTATATCGTCACGTCGCTGGCGTGGGATGCGGTACGGGCACTTGGGAAC GTTATTTTGATTGCACTGCTGGGGCGGGTTGTGCTGAAAGAACTGCGCCGTTTTCGCGAGCGCTTCTGGTTTACCACTGC AACATAA
Upstream 100 bases:
>100_bases CAGGATGTTAACCGGACATGCGGTATGATCTGGAACAGTCGGTACTGACGGACGTTGCGACACTGCTCCCGGACAAGGCT TTGCGAAGACAGGCGTTACG
Downstream 100 bases:
>100_bases ACCCCTCCTCTGCCATAGAGGAGGGGTCGCGCAAGGAGGAGGGAAATTTCGCTTACTATCGGGCCAGAGCGCCACTCACT TCACCACCCGCCGGAGCACC
Product: integral membrane protein
Products: NA
Alternate protein names: Metal Ion ABC Transporter Membrane-Spanning Subunit; ABC Transporter ; Transport System Permease Protein; ABC-Type Transporter Permease Components; ABC Transporter-Like Protein
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MMSTPRAQRIATLAGDVVFGLICLLGVIAFLYPFFLGRAETGFTQAHATTAPIFFALLGPALLVLLIAELSAGRLNTRMV AILGVLTGVVAILRLPAGPADSPTFFFLIILIGYAYGSRFGFLIGTLALLVSALLTGGVGPWLPFQMFVSGWMGMSAGFL APLGRRFRPGGWGEVVLLGGFGYVWGFLFGALMNLWFWPFAPPGELGWLPGSGLAATIQQYLRFYIVTSLAWDAVRALGN VILIALLGRVVLKELRRFRERFWFTTAT
Sequences:
>Translated_268_residues MMSTPRAQRIATLAGDVVFGLICLLGVIAFLYPFFLGRAETGFTQAHATTAPIFFALLGPALLVLLIAELSAGRLNTRMV AILGVLTGVVAILRLPAGPADSPTFFFLIILIGYAYGSRFGFLIGTLALLVSALLTGGVGPWLPFQMFVSGWMGMSAGFL APLGRRFRPGGWGEVVLLGGFGYVWGFLFGALMNLWFWPFAPPGELGWLPGSGLAATIQQYLRFYIVTSLAWDAVRALGN VILIALLGRVVLKELRRFRERFWFTTAT >Mature_268_residues MMSTPRAQRIATLAGDVVFGLICLLGVIAFLYPFFLGRAETGFTQAHATTAPIFFALLGPALLVLLIAELSAGRLNTRMV AILGVLTGVVAILRLPAGPADSPTFFFLIILIGYAYGSRFGFLIGTLALLVSALLTGGVGPWLPFQMFVSGWMGMSAGFL APLGRRFRPGGWGEVVLLGGFGYVWGFLFGALMNLWFWPFAPPGELGWLPGSGLAATIQQYLRFYIVTSLAWDAVRALGN VILIALLGRVVLKELRRFRERFWFTTAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29058; Mature: 29058
Theoretical pI: Translated: 11.18; Mature: 11.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSTPRAQRIATLAGDVVFGLICLLGVIAFLYPFFLGRAETGFTQAHATTAPIFFALLGP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH ALLVLLIAELSAGRLNTRMVAILGVLTGVVAILRLPAGPADSPTFFFLIILIGYAYGSRF HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH GFLIGTLALLVSALLTGGVGPWLPFQMFVSGWMGMSAGFLAPLGRRFRPGGWGEVVLLGG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEEECC FGYVWGFLFGALMNLWFWPFAPPGELGWLPGSGLAATIQQYLRFYIVTSLAWDAVRALGN HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VILIALLGRVVLKELRRFRERFWFTTAT HHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MMSTPRAQRIATLAGDVVFGLICLLGVIAFLYPFFLGRAETGFTQAHATTAPIFFALLGP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH ALLVLLIAELSAGRLNTRMVAILGVLTGVVAILRLPAGPADSPTFFFLIILIGYAYGSRF HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH GFLIGTLALLVSALLTGGVGPWLPFQMFVSGWMGMSAGFLAPLGRRFRPGGWGEVVLLGG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEEECC FGYVWGFLFGALMNLWFWPFAPPGELGWLPGSGLAATIQQYLRFYIVTSLAWDAVRALGN HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VILIALLGRVVLKELRRFRERFWFTTAT HHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA