Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222524370

Identifier: 222524370

GI number: 222524370

Start: 1387517

End: 1387852

Strand: Reverse

Name: 222524370

Synonym: Chy400_1093

Alternate gene names: NA

Gene position: 1387852-1387517 (Counterclockwise)

Preceding gene: 222524371

Following gene: 222524369

Centisome position: 26.34

GC content: 55.06

Gene sequence:

>336_bases
ATGAGCTTCGCAGACAAAACCCTGACCTGTCGGGATTGCGGGATGGATTTCGTCTTTACAGCGGGAGAACAAGAGTTTTA
CGCCGCCAAAGGCTTTGTGAATGAGCCGGTACGTTGTCCGGCTTGCCGCAAGGCGCGTAAGTCTCAAATGAGCGAGGCGT
CTGAACGGCGACGACCGACAGCCGCTCCGGCGAATCGCGAGCGTGTTAATTATCGGGTGACGTGCGCCAGTTGTGGTCAA
GAGACGACTGTCCCATTCGTACCACGCGGCACTAAGCCCGTCTACTGTAGTTCGTGTTTCAGTAAGATGCGCGGTAATCA
GCGGTCGTTGTTTTAA

Upstream 100 bases:

>100_bases
TAGCGATCCCCTCTGAGCCTCCTCTCGGTCGAGTTCGGACGCAACGCAACCCCACACCGGCCACGAACCCTTCGTTGTTG
TGCTAGAGGAGTAGCGAGCC

Downstream 100 bases:

>100_bases
GGATCGACCCTGAAGAATAGTAGGGTGGGCGCAGGCTCCATCTGCGTCCACCTTCATTTTCTGCACGTTCGTGCAGTTGG
TACAGCCGTGTTCCTCACAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSFADKTLTCRDCGMDFVFTAGEQEFYAAKGFVNEPVRCPACRKARKSQMSEASERRRPTAAPANRERVNYRVTCASCGQ
ETTVPFVPRGTKPVYCSSCFSKMRGNQRSLF

Sequences:

>Translated_111_residues
MSFADKTLTCRDCGMDFVFTAGEQEFYAAKGFVNEPVRCPACRKARKSQMSEASERRRPTAAPANRERVNYRVTCASCGQ
ETTVPFVPRGTKPVYCSSCFSKMRGNQRSLF
>Mature_110_residues
SFADKTLTCRDCGMDFVFTAGEQEFYAAKGFVNEPVRCPACRKARKSQMSEASERRRPTAAPANRERVNYRVTCASCGQE
TTVPFVPRGTKPVYCSSCFSKMRGNQRSLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12468; Mature: 12337

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
10.8 %Cys+Met (Translated Protein)
7.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFADKTLTCRDCGMDFVFTAGEQEFYAAKGFVNEPVRCPACRKARKSQMSEASERRRPT
CCCCCCCEEHHHCCCCEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
AAPANRERVNYRVTCASCGQETTVPFVPRGTKPVYCSSCFSKMRGNQRSLF
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SFADKTLTCRDCGMDFVFTAGEQEFYAAKGFVNEPVRCPACRKARKSQMSEASERRRPT
CCCCCCEEHHHCCCCEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
AAPANRERVNYRVTCASCGQETTVPFVPRGTKPVYCSSCFSKMRGNQRSLF
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA