Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is cmk [H]

Identifier: 222524338

GI number: 222524338

Start: 1348986

End: 1349699

Strand: Reverse

Name: cmk [H]

Synonym: Chy400_1061

Alternate gene names: 222524338

Gene position: 1349699-1348986 (Counterclockwise)

Preceding gene: 222524339

Following gene: 222524337

Centisome position: 25.62

GC content: 59.94

Gene sequence:

>714_bases
ATGCGCATACCACGAACAATCGCAATTGACGGCCAATCGGCCGCAGGGAAAAGTACATTAGGTGCACTGCTTGCCGCTGA
GCTGGGCTACCTCTACTTCGACACCGGTGTGATGTACCGTGCACTGGCTCTGGCGGCGCTGCGTGCCGGTATCGATCCCG
ATGATGAGGCCGCGCTGACAGCTCTGGCCCATCGGTTAACTATCGATGTTACAGCACCAACGGTGACGGATGGGCGTCAG
TATACAGTGCTGATCGATGGCGAAGATGTGACCTGGGCCATTCGCGACCCTGACGTTGAGCGGATTGTCTCGCGGACAGC
CCGCTTTCCAGCGGTGCGGCGCGAGATGATTCGCCAGCAGCAGGCCATCGGGCGGCGGGGGCGCGTGGTGATGGTTGGCC
GCGACATCGGGACAGTGGTGATGCCTGATGCTGATCTGAAAATCTATCTTCAGGCATCATTGACCGAACGGGCACGACGG
CGCCTGGCCGAACTGCGCAGCCGGAATATTGAGATGTCGCTTGAACAGGTTGCCGCAGCACTGGCGGAACGCGATGCGCT
GGACGCTCACGTTGCCCAACCGGCGGACGATGCGATTATCCTGGTGAACGATGGTCTGACGCCGGCTGAAGAGGTGGCAT
GGGTACTACAGCAGTTTGCCAATGGTGACCAGCCACTCGCGCAAGAGATTAATCGGTGCAAGTCCACCCCCTGA

Upstream 100 bases:

>100_bases
CGAAGGGGTCAATCGGGTTGTGTACGATATTTCGTCGAAGCCACCGGCAACTATCGAATGGGAGTAGTCAGCATCGGCAG
CGCCGTGCTACAATAGAGCC

Downstream 100 bases:

>100_bases
GCATCTGATCGGTACAGCAGGTTCAGGAGAGAAGCCTTATGGCCGGAAACATCATTGATCGCTTACTGTACGAAGATGCC
GACAGTGCACTCGATCTGGC

Product: cytidylate kinase

Products: NA

Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase [H]

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MRIPRTIAIDGQSAAGKSTLGALLAAELGYLYFDTGVMYRALALAALRAGIDPDDEAALTALAHRLTIDVTAPTVTDGRQ
YTVLIDGEDVTWAIRDPDVERIVSRTARFPAVRREMIRQQQAIGRRGRVVMVGRDIGTVVMPDADLKIYLQASLTERARR
RLAELRSRNIEMSLEQVAAALAERDALDAHVAQPADDAIILVNDGLTPAEEVAWVLQQFANGDQPLAQEINRCKSTP

Sequences:

>Translated_237_residues
MRIPRTIAIDGQSAAGKSTLGALLAAELGYLYFDTGVMYRALALAALRAGIDPDDEAALTALAHRLTIDVTAPTVTDGRQ
YTVLIDGEDVTWAIRDPDVERIVSRTARFPAVRREMIRQQQAIGRRGRVVMVGRDIGTVVMPDADLKIYLQASLTERARR
RLAELRSRNIEMSLEQVAAALAERDALDAHVAQPADDAIILVNDGLTPAEEVAWVLQQFANGDQPLAQEINRCKSTP
>Mature_237_residues
MRIPRTIAIDGQSAAGKSTLGALLAAELGYLYFDTGVMYRALALAALRAGIDPDDEAALTALAHRLTIDVTAPTVTDGRQ
YTVLIDGEDVTWAIRDPDVERIVSRTARFPAVRREMIRQQQAIGRRGRVVMVGRDIGTVVMPDADLKIYLQASLTERARR
RLAELRSRNIEMSLEQVAAALAERDALDAHVAQPADDAIILVNDGLTPAEEVAWVLQQFANGDQPLAQEINRCKSTP

Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]

COG id: COG0283

COG function: function code F; Cytidylate kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787139, Length=219, Percent_Identity=38.8127853881278, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003136
- InterPro:   IPR011994 [H]

Pfam domain/function: PF02224 Cytidylate_kin [H]

EC number: =2.7.4.14 [H]

Molecular weight: Translated: 25913; Mature: 25913

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIPRTIAIDGQSAAGKSTLGALLAAELGYLYFDTGVMYRALALAALRAGIDPDDEAALT
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ALAHRLTIDVTAPTVTDGRQYTVLIDGEDVTWAIRDPDVERIVSRTARFPAVRREMIRQQ
HHHHHHEEEEECCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHH
QAIGRRGRVVMVGRDIGTVVMPDADLKIYLQASLTERARRRLAELRSRNIEMSLEQVAAA
HHHCCCCCEEEEECCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LAERDALDAHVAQPADDAIILVNDGLTPAEEVAWVLQQFANGDQPLAQEINRCKSTP
HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MRIPRTIAIDGQSAAGKSTLGALLAAELGYLYFDTGVMYRALALAALRAGIDPDDEAALT
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ALAHRLTIDVTAPTVTDGRQYTVLIDGEDVTWAIRDPDVERIVSRTARFPAVRREMIRQQ
HHHHHHEEEEECCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHH
QAIGRRGRVVMVGRDIGTVVMPDADLKIYLQASLTERARRRLAELRSRNIEMSLEQVAAA
HHHCCCCCEEEEECCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LAERDALDAHVAQPADDAIILVNDGLTPAEEVAWVLQQFANGDQPLAQEINRCKSTP
HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA