| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is yeaH [C]
Identifier: 222524333
GI number: 222524333
Start: 1340847
End: 1341962
Strand: Direct
Name: yeaH [C]
Synonym: Chy400_1056
Alternate gene names: 222524333
Gene position: 1340847-1341962 (Clockwise)
Preceding gene: 222524332
Following gene: 222524334
Centisome position: 25.45
GC content: 54.48
Gene sequence:
>1116_bases ATGTCGATGTCAATGAAACGCGCAGAACGCGATCTCAGTCGCTTCCGTGAGATTGTGCGTGGTCGGATTAAAAAAGACCT GCGCAAATATATGTCTCAGGGTGAGTTGATCGGTCGGCAGGGGAAACGCTTTGTCAGTATCCCTATGCCGCAGATTGATA TTCCGCAGTTCCGCTACGGGGCCAAGCAGGCCGGTGGCGTTGGTCAGGGTGAAGGAAATGTCGGTGATCCAATCGCCCAG GGTGATGGTCAGCCCGGTGCAGGCCAGGCCGGTGCCGAACCCGGCCAGCATATCCTGGAGGTTGATGTCTCGATTGAAGA GCTGGCTCAGATTCTGGGTGAAGAGTTACAACTGCCCAATATTCAGCCCAAAGGCAAGAAGAACCTGATCAGCGAGAAGG ATAAGTACAGCGGTATCCGCCGTACCGGGCCTAATTCGCTGCGCCACTTCAAGCGCACCTATCGCGAGGCACTCCGTCGC CAGATCGCCTCTGGCGAGTACGATATTCACAATCCGGTGGTGGTGCCTATTCCCGACGATATGCGTTACCGCTCGTGGAA AGAGACCCTGATGCCCGAAAGTAACGCCGTCATTATTTATATGATGGACGTTTCAGGGTCGATGGGTACCGAACAAAAAG AGCTGGTACGCATGACCGCCTTCTGGATCGAGACCTGGCTGCGTTCACAGTATAAATCCATCGAAATTCGCTATATCGTC CACGATGCAGCCGCCAAAGAGGTTGATCAGCAGACCTTCTACCACATTCGTGAAGGTGGCGGGACCAAAATCTCGTCGGC CTACAAGCTCTGTAATCGCCTGATCGACGAGCGTTATCCGGCGACTGAGTGGAACATCTACCCGTTCCACTTCTCTGATG GCGACAACTGGGGCGGTGGTGATACCCGCGAATGTGTTGAACTGCTCAAGCGCGAGCTACTGCCGAAAGTTAATCTCTTC TGCTACGGCCAGGTGCGTTCGTTGTACGGATCAGGGCGCTTCGCCCACGATCTGGAAGAGTACCTCCGTGGTGATGATCG AGTAGTGATTGCCGAAATTGCCGACCGTGACGATATCTATGATGCAATTCGCGCCTTCCTCGGCAAAGGGCGCTGA
Upstream 100 bases:
>100_bases CCGTTAGGCGTCGGTGATACCACGTTCGCTATGCAACCAATAACCGGCACGGAAGAGGGCGGTCAAGCGCCCTCTTCCGA TACCAGGATGGGGGGCTACA
Downstream 100 bases:
>100_bases TTGCGTTACCCCTATGGTGTGTGTATGAAGAGTACCCGCCTTCCCGCTCATCTCGAACAGGCGCGTCAGGAGATCGAGCA AATTGCCCGTGAATACGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MSMSMKRAERDLSRFREIVRGRIKKDLRKYMSQGELIGRQGKRFVSIPMPQIDIPQFRYGAKQAGGVGQGEGNVGDPIAQ GDGQPGAGQAGAEPGQHILEVDVSIEELAQILGEELQLPNIQPKGKKNLISEKDKYSGIRRTGPNSLRHFKRTYREALRR QIASGEYDIHNPVVVPIPDDMRYRSWKETLMPESNAVIIYMMDVSGSMGTEQKELVRMTAFWIETWLRSQYKSIEIRYIV HDAAAKEVDQQTFYHIREGGGTKISSAYKLCNRLIDERYPATEWNIYPFHFSDGDNWGGGDTRECVELLKRELLPKVNLF CYGQVRSLYGSGRFAHDLEEYLRGDDRVVIAEIADRDDIYDAIRAFLGKGR
Sequences:
>Translated_371_residues MSMSMKRAERDLSRFREIVRGRIKKDLRKYMSQGELIGRQGKRFVSIPMPQIDIPQFRYGAKQAGGVGQGEGNVGDPIAQ GDGQPGAGQAGAEPGQHILEVDVSIEELAQILGEELQLPNIQPKGKKNLISEKDKYSGIRRTGPNSLRHFKRTYREALRR QIASGEYDIHNPVVVPIPDDMRYRSWKETLMPESNAVIIYMMDVSGSMGTEQKELVRMTAFWIETWLRSQYKSIEIRYIV HDAAAKEVDQQTFYHIREGGGTKISSAYKLCNRLIDERYPATEWNIYPFHFSDGDNWGGGDTRECVELLKRELLPKVNLF CYGQVRSLYGSGRFAHDLEEYLRGDDRVVIAEIADRDDIYDAIRAFLGKGR >Mature_370_residues SMSMKRAERDLSRFREIVRGRIKKDLRKYMSQGELIGRQGKRFVSIPMPQIDIPQFRYGAKQAGGVGQGEGNVGDPIAQG DGQPGAGQAGAEPGQHILEVDVSIEELAQILGEELQLPNIQPKGKKNLISEKDKYSGIRRTGPNSLRHFKRTYREALRRQ IASGEYDIHNPVVVPIPDDMRYRSWKETLMPESNAVIIYMMDVSGSMGTEQKELVRMTAFWIETWLRSQYKSIEIRYIVH DAAAKEVDQQTFYHIREGGGTKISSAYKLCNRLIDERYPATEWNIYPFHFSDGDNWGGGDTRECVELLKRELLPKVNLFC YGQVRSLYGSGRFAHDLEEYLRGDDRVVIAEIADRDDIYDAIRAFLGKGR
Specific function: Unknown
COG id: COG2718
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0229 family [H]
Homologues:
Organism=Escherichia coli, GI1788084, Length=425, Percent_Identity=28.9411764705882, Blast_Score=141, Evalue=7e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014230 - InterPro: IPR006698 [H]
Pfam domain/function: PF04285 DUF444 [H]
EC number: NA
Molecular weight: Translated: 42315; Mature: 42183
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMSMKRAERDLSRFREIVRGRIKKDLRKYMSQGELIGRQGKRFVSIPMPQIDIPQFRYG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEECCCCCCCCCHHHCC AKQAGGVGQGEGNVGDPIAQGDGQPGAGQAGAEPGQHILEVDVSIEELAQILGEELQLPN CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCC IQPKGKKNLISEKDKYSGIRRTGPNSLRHFKRTYREALRRQIASGEYDIHNPVVVPIPDD CCCCCCHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC MRYRSWKETLMPESNAVIIYMMDVSGSMGTEQKELVRMTAFWIETWLRSQYKSIEIRYIV HHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE HDAAAKEVDQQTFYHIREGGGTKISSAYKLCNRLIDERYPATEWNIYPFHFSDGDNWGGG EHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCC DTRECVELLKRELLPKVNLFCYGQVRSLYGSGRFAHDLEEYLRGDDRVVIAEIADRDDIY CHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCHHHH DAIRAFLGKGR HHHHHHHCCCC >Mature Secondary Structure SMSMKRAERDLSRFREIVRGRIKKDLRKYMSQGELIGRQGKRFVSIPMPQIDIPQFRYG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEECCCCCCCCCHHHCC AKQAGGVGQGEGNVGDPIAQGDGQPGAGQAGAEPGQHILEVDVSIEELAQILGEELQLPN CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCC IQPKGKKNLISEKDKYSGIRRTGPNSLRHFKRTYREALRRQIASGEYDIHNPVVVPIPDD CCCCCCHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC MRYRSWKETLMPESNAVIIYMMDVSGSMGTEQKELVRMTAFWIETWLRSQYKSIEIRYIV HHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE HDAAAKEVDQQTFYHIREGGGTKISSAYKLCNRLIDERYPATEWNIYPFHFSDGDNWGGG EHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCC DTRECVELLKRELLPKVNLFCYGQVRSLYGSGRFAHDLEEYLRGDDRVVIAEIADRDDIY CHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCHHHH DAIRAFLGKGR HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA