| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524321
Identifier: 222524321
GI number: 222524321
Start: 1327587
End: 1328327
Strand: Reverse
Name: 222524321
Synonym: Chy400_1044
Alternate gene names: NA
Gene position: 1328327-1327587 (Counterclockwise)
Preceding gene: 222524322
Following gene: 222524320
Centisome position: 25.21
GC content: 61.81
Gene sequence:
>741_bases ATGAACGCGGTCTTTTCAGTGATCGAGCCTTTGCCGGCGGCAATTGCCCCACCCGGCCCCTGGCAACCGGTCGTGACCGG TAGCGCCTTCACCGCCGGGGATCAGCCTGATGTCGTCTGGCAGGCACGCTTACCGGAAGAACTGGGAGCAGCGCAGGCAG CGTTGCACGAAGCGGCGACTCGTCTTCGTGCCGACGAGCAGGCTTTGGCGACGGTAGAACGCCGACTGCTCCAGGTTGCG AGTGGTGCCGTCAGTTTCAGCACCCTGATGCCGCAGCCTGAGCAAACGTTGCTGCGCTTGCTGGCAACGGTGGATCCGGC CAGCGGTGCCAGTTTTGGTCTGCGCGACGAGATACAAGAGCGCTGGCAGGCGGCTCAAGACCAGCTTGCTGCGCTGAGTG CCCAGGCGTGTGAAGCTCTTGGCTCCTATGCCACAGTCGAAACGATTCAGGGTGCGCGCCTGATCGGCCGTACCCGAATC AACTGGCACGGTGATGCCCGCTCATTGTTGATTGCCGACATCGATCTGGCGCAGGCGGCGATCCATCGCCAAACGCTGGC GCTGGCACTTCGCTCGCGGGCTGCACTCTTGCGAATGGTCGGACTGGTAGGTCGGGGAGCAGCGATTGCCGCCACAATGT TCACATCGCCAGCCGGTGCGCTGCTGGCATTACCGGCAGTCTGGCAATTTGTGCAAGAGGTATTGGCCGAAGTCCGTCAA TCAATGGTATCATCTACATGA
Upstream 100 bases:
>100_bases TCCACGTCAGTATGGTGCAGCAGGCGCAGGCGAACCGGGCCGAGATGGTGCGGGCTATCGCCGCCGCTGCTGCCGGCCTG TTGAGTGCGTTGCAGGGCAA
Downstream 100 bases:
>100_bases AACACCCGCACGAATATGAGGAGATACGGCATGGCTAGCGAACTGGAAAACTCGATCCGCAGTGCGGCAGCTAAAGTGGC AGCCTATGTGGCCGATGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MNAVFSVIEPLPAAIAPPGPWQPVVTGSAFTAGDQPDVVWQARLPEELGAAQAALHEAATRLRADEQALATVERRLLQVA SGAVSFSTLMPQPEQTLLRLLATVDPASGASFGLRDEIQERWQAAQDQLAALSAQACEALGSYATVETIQGARLIGRTRI NWHGDARSLLIADIDLAQAAIHRQTLALALRSRAALLRMVGLVGRGAAIAATMFTSPAGALLALPAVWQFVQEVLAEVRQ SMVSST
Sequences:
>Translated_246_residues MNAVFSVIEPLPAAIAPPGPWQPVVTGSAFTAGDQPDVVWQARLPEELGAAQAALHEAATRLRADEQALATVERRLLQVA SGAVSFSTLMPQPEQTLLRLLATVDPASGASFGLRDEIQERWQAAQDQLAALSAQACEALGSYATVETIQGARLIGRTRI NWHGDARSLLIADIDLAQAAIHRQTLALALRSRAALLRMVGLVGRGAAIAATMFTSPAGALLALPAVWQFVQEVLAEVRQ SMVSST >Mature_246_residues MNAVFSVIEPLPAAIAPPGPWQPVVTGSAFTAGDQPDVVWQARLPEELGAAQAALHEAATRLRADEQALATVERRLLQVA SGAVSFSTLMPQPEQTLLRLLATVDPASGASFGLRDEIQERWQAAQDQLAALSAQACEALGSYATVETIQGARLIGRTRI NWHGDARSLLIADIDLAQAAIHRQTLALALRSRAALLRMVGLVGRGAAIAATMFTSPAGALLALPAVWQFVQEVLAEVRQ SMVSST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26030; Mature: 26030
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAVFSVIEPLPAAIAPPGPWQPVVTGSAFTAGDQPDVVWQARLPEELGAAQAALHEAAT CCHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHH RLRADEQALATVERRLLQVASGAVSFSTLMPQPEQTLLRLLATVDPASGASFGLRDEIQE HHHCHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHH RWQAAQDQLAALSAQACEALGSYATVETIQGARLIGRTRINWHGDARSLLIADIDLAQAA HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCEECCCCCCCEEEEEHHHHHHHH IHRQTLALALRSRAALLRMVGLVGRGAAIAATMFTSPAGALLALPAVWQFVQEVLAEVRQ HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH SMVSST HHHCCC >Mature Secondary Structure MNAVFSVIEPLPAAIAPPGPWQPVVTGSAFTAGDQPDVVWQARLPEELGAAQAALHEAAT CCHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHH RLRADEQALATVERRLLQVASGAVSFSTLMPQPEQTLLRLLATVDPASGASFGLRDEIQE HHHCHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHH RWQAAQDQLAALSAQACEALGSYATVETIQGARLIGRTRINWHGDARSLLIADIDLAQAA HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCEECCCCCCCEEEEEHHHHHHHH IHRQTLALALRSRAALLRMVGLVGRGAAIAATMFTSPAGALLALPAVWQFVQEVLAEVRQ HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH SMVSST HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA