Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222524196

Identifier: 222524196

GI number: 222524196

Start: 1158262

End: 1159026

Strand: Direct

Name: 222524196

Synonym: Chy400_0917

Alternate gene names: NA

Gene position: 1158262-1159026 (Clockwise)

Preceding gene: 222524194

Following gene: 222524211

Centisome position: 21.98

GC content: 68.37

Gene sequence:

>765_bases
ATGCGTCGCCCCTACCAGCGCCCAGCGCTGCATCGTTCAGGTGCAGCATCAGGGAAATCGGTGGCGGTTATGACCTATAC
TGCCAGATTCCTATCAGGACGCCCCGATCCATCGAAATGCCCCTCTCCCGCGCCGGGCGTAGGAGAGGGGCCGGGGGTAA
GGGCGTTCCCCCGCCCCCAGCGGGGGCGGGCCGGGGTGGGGGCGTGTCTGCATACGCTGGAAGCACACCCCTCCAGCACA
CCCATCACCTGCACACTGGGAGCGCGCGCCGGAGGCTCGCCCAGCCGAATGTCGCAACCTCAACCAGCCCACACAGCGGC
GACCCACCCCACACTGGCGACTCCCGCCCCCAGCGGGGGCGGGCCGGGGTGGGGGCGTGTCTGCATACACTGGGAACACG
CGCCACCGGCGCACTCATCACCTGCACACTGGGAGCGCGCGCGCCACCGGCGCGCATGGTGCCGGTACCACTCCCTCACG
CGCCAGCCATACATGTGCTCGCCGTTTGGAGTGCGGCAGCCATGCTGCCGCGCCAGCCGTACTTGCGATCCGGTGCGTGT
CGCAGCGGTTACCCTGCCGCTCTCCGCACAGTGGAATCACGTTTCAGCGGGGATACCGTTACCGACCAGTATTACCCGTG
ACGCAGCGTTTGGAGTGCGGCAGCCATGCTGCCGCGCCAGCCGTGCTCGCGATCACGGGCGGGTGGCAGCGGTTGCTTTG
CGGGCCACGAGGACGACGGGGGTGCAGCGCATATCTGGCTTTTGA

Upstream 100 bases:

>100_bases
CTCAACAAGGTGCATTATTCGGGTGTCATGCTCGTACAGAAGCGTTACCGGGTGTACTCCTGACGAGTCACTCATGGCTT
GCCGTCAGTAAGGGCGACGC

Downstream 100 bases:

>100_bases
CCATCCGCGCTCTCACATTTTGACCAACACGGTACATCATCGCCAGAAACCCTGGGCAACATCGCAGAGCGTCGGTCGCG
GGCGTGGCGCAGGCTTCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MRRPYQRPALHRSGAASGKSVAVMTYTARFLSGRPDPSKCPSPAPGVGEGPGVRAFPRPQRGRAGVGACLHTLEAHPSST
PITCTLGARAGGSPSRMSQPQPAHTAATHPTLATPAPSGGGPGWGRVCIHWEHAPPAHSSPAHWERARHRRAWCRYHSLT
RQPYMCSPFGVRQPCCRASRTCDPVRVAAVTLPLSAQWNHVSAGIPLPTSITRDAAFGVRQPCCRASRARDHGRVAAVAL
RATRTTGVQRISGF

Sequences:

>Translated_254_residues
MRRPYQRPALHRSGAASGKSVAVMTYTARFLSGRPDPSKCPSPAPGVGEGPGVRAFPRPQRGRAGVGACLHTLEAHPSST
PITCTLGARAGGSPSRMSQPQPAHTAATHPTLATPAPSGGGPGWGRVCIHWEHAPPAHSSPAHWERARHRRAWCRYHSLT
RQPYMCSPFGVRQPCCRASRTCDPVRVAAVTLPLSAQWNHVSAGIPLPTSITRDAAFGVRQPCCRASRARDHGRVAAVAL
RATRTTGVQRISGF
>Mature_254_residues
MRRPYQRPALHRSGAASGKSVAVMTYTARFLSGRPDPSKCPSPAPGVGEGPGVRAFPRPQRGRAGVGACLHTLEAHPSST
PITCTLGARAGGSPSRMSQPQPAHTAATHPTLATPAPSGGGPGWGRVCIHWEHAPPAHSSPAHWERARHRRAWCRYHSLT
RQPYMCSPFGVRQPCCRASRTCDPVRVAAVTLPLSAQWNHVSAGIPLPTSITRDAAFGVRQPCCRASRARDHGRVAAVAL
RATRTTGVQRISGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27082; Mature: 27082

Theoretical pI: Translated: 12.03; Mature: 12.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRPYQRPALHRSGAASGKSVAVMTYTARFLSGRPDPSKCPSPAPGVGEGPGVRAFPRPQ
CCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RGRAGVGACLHTLEAHPSSTPITCTLGARAGGSPSRMSQPQPAHTAATHPTLATPAPSGG
CCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
GPGWGRVCIHWEHAPPAHSSPAHWERARHRRAWCRYHSLTRQPYMCSPFGVRQPCCRASR
CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHC
TCDPVRVAAVTLPLSAQWNHVSAGIPLPTSITRDAAFGVRQPCCRASRARDHGRVAAVAL
CCCCEEEEEEEEECCCCCCEEECCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCEEEEEE
RATRTTGVQRISGF
HHHHHHHHHHHCCC
>Mature Secondary Structure
MRRPYQRPALHRSGAASGKSVAVMTYTARFLSGRPDPSKCPSPAPGVGEGPGVRAFPRPQ
CCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RGRAGVGACLHTLEAHPSSTPITCTLGARAGGSPSRMSQPQPAHTAATHPTLATPAPSGG
CCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
GPGWGRVCIHWEHAPPAHSSPAHWERARHRRAWCRYHSLTRQPYMCSPFGVRQPCCRASR
CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHC
TCDPVRVAAVTLPLSAQWNHVSAGIPLPTSITRDAAFGVRQPCCRASRARDHGRVAAVAL
CCCCEEEEEEEEECCCCCCEEECCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCEEEEEE
RATRTTGVQRISGF
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA