| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524078
Identifier: 222524078
GI number: 222524078
Start: 1000912
End: 1002096
Strand: Reverse
Name: 222524078
Synonym: Chy400_0794
Alternate gene names: NA
Gene position: 1002096-1000912 (Counterclockwise)
Preceding gene: 222524079
Following gene: 222524076
Centisome position: 19.02
GC content: 57.97
Gene sequence:
>1185_bases ATGTCAACATCACCACTGACCGTTTTCCTGGTGTTTTTACGCCTTGGTCTGACGTCATTTGGGGGGCCGGTAGCTCATTT AGGTTATTTTCGGGCTGATCTGGTCGAGCGGCGACGCTGGCTCGATGAAGTAATGTATGCCGACCTGATTGCGCTGTGCC AGTTTTTACCGGGGCCGGCCAGCAGCCAGGTAGGGATTGCGATTGGCACGATACGTGCAGGTCTGCTGGGCGGATTAGCA GCCTGGCTGGGATTTACGTTGCCGTCCGCCTTGATCATGATCGCTTTTGCCTACGGCATTGCGCTGTTGGGTGATGTGGC CGGCAGTGGCTGGTTGCATGGCTTAAAAGTGGTGGTCGTGGCAGTGGTGGCACAGGCGGTCTGGCAGATGGGGCAGCGGC TCTGTCCAGACCGGTTGCGGGCAAGTATAGCAGTTATTGCCGCTGTGATCCTCGTGATCTGGTCAGATGCTCTTGTGCAA TTGCTGGTGATTGGGGTCGGCGGGCTGATCGGGTGGCGCCTGCTCCAGTTCCAAACGAACAGCAATTCTGTCATCAAATC GCCGATTATGCCGCGTATCGGTATGCTGTTCGGTTTGCTCTTTGCTATCTTACTGGCCGGTTCGTTAATCATCACCTCGT TCGGCGGCAATCCAACGCTGACTCTGCTGGCGGGTATGGTACGTAGCGGCTCTCTGGTATTCGGAGGTGGGCATGTGGTG CTGCCGCTTCTGGAGCCGGTTGTAGTTGGTGGCGACTTCATGAGTGCGGAGACCTTCATCGCCGGTTATGGCGCTGCGCA GGCCGTACCAGGCCCATTGTTGAGTTTTAGTGCGTATCTGGGCGCAGTGGCATCAGCGTACCCCGCCGGTTGGGTTGGCG GGATATTGGCCCTCGTTGCTATCTTTCTGCCCTCGTTTTTGCTGGTGTGGGCAGCATTACCCTTTTGGGCAACCCTACGC GCCCGGCCCGATGCGCAGGCCGCTCTGGCTGGTGTGAATGCAGCCGTGGTAGGGGTTTTGCTGGCAGCCTTGTATCAGCC AGTGATAACCAGCGCGATCCGTGGCCCCTTTGATGTGGCACTGGCGCTAGGTTCTTTTGCTGCGCTACACCTCTGGCGCA TACCACCGTGGGCAGTTGTGCTCCTCTGCGCACTGATCGGTGGTTTCGGATGGAGTGGCCAGTAA
Upstream 100 bases:
>100_bases CAGGCCGGAACAGTTTTCTTGATCGCCACGATGGTTGTCCATTACGTTCGGTGTGTACGTGGTATCAGGGCCATCGCCAA TTGTCTTAACGTGAGCGGCT
Downstream 100 bases:
>100_bases TCAATCAGGCCAGCGCATCAGATCGGCCACCTCACTCTGCCCAACCGGGTGCTGGCCGCGCTCAATAGCTGTGCGCAGCC GTGTAATCCGGTCTGCCGAA
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MSTSPLTVFLVFLRLGLTSFGGPVAHLGYFRADLVERRRWLDEVMYADLIALCQFLPGPASSQVGIAIGTIRAGLLGGLA AWLGFTLPSALIMIAFAYGIALLGDVAGSGWLHGLKVVVVAVVAQAVWQMGQRLCPDRLRASIAVIAAVILVIWSDALVQ LLVIGVGGLIGWRLLQFQTNSNSVIKSPIMPRIGMLFGLLFAILLAGSLIITSFGGNPTLTLLAGMVRSGSLVFGGGHVV LPLLEPVVVGGDFMSAETFIAGYGAAQAVPGPLLSFSAYLGAVASAYPAGWVGGILALVAIFLPSFLLVWAALPFWATLR ARPDAQAALAGVNAAVVGVLLAALYQPVITSAIRGPFDVALALGSFAALHLWRIPPWAVVLLCALIGGFGWSGQ
Sequences:
>Translated_394_residues MSTSPLTVFLVFLRLGLTSFGGPVAHLGYFRADLVERRRWLDEVMYADLIALCQFLPGPASSQVGIAIGTIRAGLLGGLA AWLGFTLPSALIMIAFAYGIALLGDVAGSGWLHGLKVVVVAVVAQAVWQMGQRLCPDRLRASIAVIAAVILVIWSDALVQ LLVIGVGGLIGWRLLQFQTNSNSVIKSPIMPRIGMLFGLLFAILLAGSLIITSFGGNPTLTLLAGMVRSGSLVFGGGHVV LPLLEPVVVGGDFMSAETFIAGYGAAQAVPGPLLSFSAYLGAVASAYPAGWVGGILALVAIFLPSFLLVWAALPFWATLR ARPDAQAALAGVNAAVVGVLLAALYQPVITSAIRGPFDVALALGSFAALHLWRIPPWAVVLLCALIGGFGWSGQ >Mature_393_residues STSPLTVFLVFLRLGLTSFGGPVAHLGYFRADLVERRRWLDEVMYADLIALCQFLPGPASSQVGIAIGTIRAGLLGGLAA WLGFTLPSALIMIAFAYGIALLGDVAGSGWLHGLKVVVVAVVAQAVWQMGQRLCPDRLRASIAVIAAVILVIWSDALVQL LVIGVGGLIGWRLLQFQTNSNSVIKSPIMPRIGMLFGLLFAILLAGSLIITSFGGNPTLTLLAGMVRSGSLVFGGGHVVL PLLEPVVVGGDFMSAETFIAGYGAAQAVPGPLLSFSAYLGAVASAYPAGWVGGILALVAIFLPSFLLVWAALPFWATLRA RPDAQAALAGVNAAVVGVLLAALYQPVITSAIRGPFDVALALGSFAALHLWRIPPWAVVLLCALIGGFGWSGQ
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 41005; Mature: 40874
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSPLTVFLVFLRLGLTSFGGPVAHLGYFRADLVERRRWLDEVMYADLIALCQFLPGPA CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SSQVGIAIGTIRAGLLGGLAAWLGFTLPSALIMIAFAYGIALLGDVAGSGWLHGLKVVVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AVVAQAVWQMGQRLCPDRLRASIAVIAAVILVIWSDALVQLLVIGVGGLIGWRLLQFQTN HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC SNSVIKSPIMPRIGMLFGLLFAILLAGSLIITSFGGNPTLTLLAGMVRSGSLVFGGGHVV CCCEECCCCHHHHHHHHHHHHHHHHHCHHHEEECCCCHHHHHHHHHHHCCCEEEECCEEH LPLLEPVVVGGDFMSAETFIAGYGAAQAVPGPLLSFSAYLGAVASAYPAGWVGGILALVA HHHHHHHHCCCCHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IFLPSFLLVWAALPFWATLRARPDAQAALAGVNAAVVGVLLAALYQPVITSAIRGPFDVA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LALGSFAALHLWRIPPWAVVLLCALIGGFGWSGQ HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure STSPLTVFLVFLRLGLTSFGGPVAHLGYFRADLVERRRWLDEVMYADLIALCQFLPGPA CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SSQVGIAIGTIRAGLLGGLAAWLGFTLPSALIMIAFAYGIALLGDVAGSGWLHGLKVVVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AVVAQAVWQMGQRLCPDRLRASIAVIAAVILVIWSDALVQLLVIGVGGLIGWRLLQFQTN HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC SNSVIKSPIMPRIGMLFGLLFAILLAGSLIITSFGGNPTLTLLAGMVRSGSLVFGGGHVV CCCEECCCCHHHHHHHHHHHHHHHHHCHHHEEECCCCHHHHHHHHHHHCCCEEEECCEEH LPLLEPVVVGGDFMSAETFIAGYGAAQAVPGPLLSFSAYLGAVASAYPAGWVGGILALVA HHHHHHHHCCCCHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IFLPSFLLVWAALPFWATLRARPDAQAALAGVNAAVVGVLLAALYQPVITSAIRGPFDVA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LALGSFAALHLWRIPPWAVVLLCALIGGFGWSGQ HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]