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The map label for this gene is bedB [H]

Identifier: 222524045

GI number: 222524045

Start: 949321

End: 949644

Strand: Direct

Name: bedB [H]

Synonym: Chy400_0760

Alternate gene names: 222524045

Gene position: 949321-949644 (Clockwise)

Preceding gene: 222524042

Following gene: 222524046

Centisome position: 18.02

GC content: 52.16

Gene sequence:

>324_bases
GTGGAACGGTTTAAAATTTGTCATCGTCACGAATTACTACCAGGTCAGATGCGATACGTTGAGATTGATGGACTGCCAAT
CGGGATCGCCAATGTTGGTGGTGACATCTACGCCTTTAGCGACAGTTGCCGACACGAAGGTGGCCCACTCTCGGCGGGGG
TATTGATTGATCACACCGTCACATGTCCCTGGCACGGATGGACATACGATGTGCGTACCGGCAAGAGTATCGTGCCACCG
GTGGGGCTACGTATCGCTACCTACCCGGTTGAGATCATCAATGACGAGATCTATGTGCTGATTGACTGGCCATCGTCTCA
ATGA

Upstream 100 bases:

>100_bases
CGATCCAGTAATATGTATAATGCGTATTATAACGTATGAGGGCGTATATTGTAATGGTACTGTAATCATAAATACCTCGC
CTGTCAATGGAGTAGCGCCT

Downstream 100 bases:

>100_bases
GCCAGAGCACATTCGTTGGTAACGCACCGCATCCCCGTTCCCTACCTCATCGGCCTGGAACCTCGCCGGCAAGTGCATGT
TGCATCTACATACCTGAAAC

Product: Rieske (2Fe-2S) domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MERFKICHRHELLPGQMRYVEIDGLPIGIANVGGDIYAFSDSCRHEGGPLSAGVLIDHTVTCPWHGWTYDVRTGKSIVPP
VGLRIATYPVEIINDEIYVLIDWPSSQ

Sequences:

>Translated_107_residues
MERFKICHRHELLPGQMRYVEIDGLPIGIANVGGDIYAFSDSCRHEGGPLSAGVLIDHTVTCPWHGWTYDVRTGKSIVPP
VGLRIATYPVEIINDEIYVLIDWPSSQ
>Mature_107_residues
MERFKICHRHELLPGQMRYVEIDGLPIGIANVGGDIYAFSDSCRHEGGPLSAGVLIDHTVTCPWHGWTYDVRTGKSIVPP
VGLRIATYPVEIINDEIYVLIDWPSSQ

Specific function: This protein seems to be a 2Fe-2S ferredoxin [H]

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788890, Length=109, Percent_Identity=35.7798165137615, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: NA

Molecular weight: Translated: 11962; Mature: 11962

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERFKICHRHELLPGQMRYVEIDGLPIGIANVGGDIYAFSDSCRHEGGPLSAGVLIDHTV
CCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCEEEEECCCCCCCCCCEECCEEEEEEE
TCPWHGWTYDVRTGKSIVPPVGLRIATYPVEIINDEIYVLIDWPSSQ
ECCCCCEEEECCCCCCCCCCCCEEEEEEEEEEECCCEEEEEECCCCC
>Mature Secondary Structure
MERFKICHRHELLPGQMRYVEIDGLPIGIANVGGDIYAFSDSCRHEGGPLSAGVLIDHTV
CCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCEEEEECCCCCCCCCCEECCEEEEEEE
TCPWHGWTYDVRTGKSIVPPVGLRIATYPVEIINDEIYVLIDWPSSQ
ECCCCCEEEECCCCCCCCCCCCEEEEEEEEEEECCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8344526 [H]