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The map label for this gene is 222524016

Identifier: 222524016

GI number: 222524016

Start: 915060

End: 916328

Strand: Direct

Name: 222524016

Synonym: Chy400_0731

Alternate gene names: NA

Gene position: 915060-916328 (Clockwise)

Preceding gene: 222524015

Following gene: 222524017

Centisome position: 17.37

GC content: 57.76

Gene sequence:

>1269_bases
ATGATTAGTCAACGATTGCGCCAGTTGCGGTTGGCGCGCGGCATGACCCTCAGCGATCTGGCTCAGGCAACCAACCACAT
TGTTACCCGTCAGGCTATTTCCAAGTATGAACATGGGCACGCTCAACCATCACCGACGGTGCTTCAGCGCTTAGCGCAGG
CACTCGGTGTCCGACCGACCGATCTCCTCGACGGTGCCAATATCCGGGTAGATGTCGTTGCCTATCGTAAACGGGCTTCG
CTCGGCAAACGACAGAGTGAGCATCTCGCCGCGTTGGCCGAAGAGGCATTGCGCGAACGGGTGCGATTACAACGGCTTAT
TGGCGACACCAGGGTACTCGATGTCCCGTTGCAGGAGTATCCGGTGAAGAATCTGGACGACGTTGAGTCTGCGGCTACCG
CTCTCCGTAACCGTTGGGATCTGGGTAGTGCACCGATTGCCAATTTGACCGACGTGTTAGAAGATCACGGCTTGCACGTT
ATCGAACTCGCAACCATTGACGGCTTCGATGGCGTTGCTGTAATTGCCCGTGATGAACACGGTCATCCGCTGGCCGCAGC
GGTGATTGCGCAGCGGAGCGATGATGGTGCGCGATGGCGGATGAATCTCGCCCACGAGCTGGCGCATCTGGTGCTGCAAC
CGCAAGACAATCTCGATGAAGAGAAGGCTGCGTTTCGCTTTGCAGCGGCATTTCTCGCGCCAGCCCATGATCTGCGCGCC
TTTATCGGTGAGCGCCGTCATCATCTACATCTGGATGAATTGCTCTTGATGAAGCACCACTTCGGTATGAGCATCCAGGC
GCTGCTTTACCGCATGCAGACGCTGGACATTATCAGTCCATCTCTCTTCCGCAAGTGGATGATCGAATTCGGTGAACGGG
GCTGGCGAATGGCAGAACCGGAACCACTGCCACACGAAGAACCGCTCTGGTTGCGGCGGGCCACCCTTCACGCCCTGGCG
GAAGAGCTGATCGATCCCGCAGAAGCGCAGCGTTTGCTGGGTGATGAGGTGGCAACCGGTGTGGCGCAGGCCGTTTTCGC
CGAAACTGTCATCCCTGAGACTATTCCTGAAACCATCCAGGCCGAGGATGTGCCGGAAAGTCATTACCCACCGCCACCTC
CAGCTCACACTGTTCCCTGCCGGCAATTGCTCCGGCTACCGCAGGCTGAACGCCATGCGATCCTGGCTGCGCAGGCGGCC
AATGCACTCGATCTCTATCAGTCTGTCGCCGATTCTGTAAACGAGGTCGCAACGAGTGAGCACAAGTAA

Upstream 100 bases:

>100_bases
GGTTCAAACATTGTATTTTTCAGATTCCACCCCTTCCAACACTGGTTGACAAAGTGTCAGCGAACAGCGATAATTGTCAA
CTGTCAGGAAGGAGTTGGCC

Downstream 100 bases:

>100_bases
ATCGCCCCGGCGTGGTGAGATCTGGCAGGCCGATCTCGGTGATCAAACATCAGGGTTAGTGTTGATAGTGAGTACTGACG
CTTTTGAACATCTGCCGATC

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator; HTH Domain-Containing Protein; Transcriptional Regulator HTH_3 Family

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MISQRLRQLRLARGMTLSDLAQATNHIVTRQAISKYEHGHAQPSPTVLQRLAQALGVRPTDLLDGANIRVDVVAYRKRAS
LGKRQSEHLAALAEEALRERVRLQRLIGDTRVLDVPLQEYPVKNLDDVESAATALRNRWDLGSAPIANLTDVLEDHGLHV
IELATIDGFDGVAVIARDEHGHPLAAAVIAQRSDDGARWRMNLAHELAHLVLQPQDNLDEEKAAFRFAAAFLAPAHDLRA
FIGERRHHLHLDELLLMKHHFGMSIQALLYRMQTLDIISPSLFRKWMIEFGERGWRMAEPEPLPHEEPLWLRRATLHALA
EELIDPAEAQRLLGDEVATGVAQAVFAETVIPETIPETIQAEDVPESHYPPPPPAHTVPCRQLLRLPQAERHAILAAQAA
NALDLYQSVADSVNEVATSEHK

Sequences:

>Translated_422_residues
MISQRLRQLRLARGMTLSDLAQATNHIVTRQAISKYEHGHAQPSPTVLQRLAQALGVRPTDLLDGANIRVDVVAYRKRAS
LGKRQSEHLAALAEEALRERVRLQRLIGDTRVLDVPLQEYPVKNLDDVESAATALRNRWDLGSAPIANLTDVLEDHGLHV
IELATIDGFDGVAVIARDEHGHPLAAAVIAQRSDDGARWRMNLAHELAHLVLQPQDNLDEEKAAFRFAAAFLAPAHDLRA
FIGERRHHLHLDELLLMKHHFGMSIQALLYRMQTLDIISPSLFRKWMIEFGERGWRMAEPEPLPHEEPLWLRRATLHALA
EELIDPAEAQRLLGDEVATGVAQAVFAETVIPETIPETIQAEDVPESHYPPPPPAHTVPCRQLLRLPQAERHAILAAQAA
NALDLYQSVADSVNEVATSEHK
>Mature_422_residues
MISQRLRQLRLARGMTLSDLAQATNHIVTRQAISKYEHGHAQPSPTVLQRLAQALGVRPTDLLDGANIRVDVVAYRKRAS
LGKRQSEHLAALAEEALRERVRLQRLIGDTRVLDVPLQEYPVKNLDDVESAATALRNRWDLGSAPIANLTDVLEDHGLHV
IELATIDGFDGVAVIARDEHGHPLAAAVIAQRSDDGARWRMNLAHELAHLVLQPQDNLDEEKAAFRFAAAFLAPAHDLRA
FIGERRHHLHLDELLLMKHHFGMSIQALLYRMQTLDIISPSLFRKWMIEFGERGWRMAEPEPLPHEEPLWLRRATLHALA
EELIDPAEAQRLLGDEVATGVAQAVFAETVIPETIPETIQAEDVPESHYPPPPPAHTVPCRQLLRLPQAERHAILAAQAA
NALDLYQSVADSVNEVATSEHK

Specific function: Unknown

COG id: COG2856

COG function: function code E; Predicted Zn peptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47108; Mature: 47108

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: PS50943 HTH_CROC1 ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISQRLRQLRLARGMTLSDLAQATNHIVTRQAISKYEHGHAQPSPTVLQRLAQALGVRPT
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCH
DLLDGANIRVDVVAYRKRASLGKRQSEHLAALAEEALRERVRLQRLIGDTRVLDVPLQEY
HHCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHC
PVKNLDDVESAATALRNRWDLGSAPIANLTDVLEDHGLHVIELATIDGFDGVAVIARDEH
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCC
GHPLAAAVIAQRSDDGARWRMNLAHELAHLVLQPQDNLDEEKAAFRFAAAFLAPAHDLRA
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHH
FIGERRHHLHLDELLLMKHHFGMSIQALLYRMQTLDIISPSLFRKWMIEFGERGWRMAEP
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC
EPLPHEEPLWLRRATLHALAEELIDPAEAQRLLGDEVATGVAQAVFAETVIPETIPETIQ
CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHC
AEDVPESHYPPPPPAHTVPCRQLLRLPQAERHAILAAQAANALDLYQSVADSVNEVATSE
CCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HK
CC
>Mature Secondary Structure
MISQRLRQLRLARGMTLSDLAQATNHIVTRQAISKYEHGHAQPSPTVLQRLAQALGVRPT
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCH
DLLDGANIRVDVVAYRKRASLGKRQSEHLAALAEEALRERVRLQRLIGDTRVLDVPLQEY
HHCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHC
PVKNLDDVESAATALRNRWDLGSAPIANLTDVLEDHGLHVIELATIDGFDGVAVIARDEH
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCC
GHPLAAAVIAQRSDDGARWRMNLAHELAHLVLQPQDNLDEEKAAFRFAAAFLAPAHDLRA
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHH
FIGERRHHLHLDELLLMKHHFGMSIQALLYRMQTLDIISPSLFRKWMIEFGERGWRMAEP
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC
EPLPHEEPLWLRRATLHALAEELIDPAEAQRLLGDEVATGVAQAVFAETVIPETIPETIQ
CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHC
AEDVPESHYPPPPPAHTVPCRQLLRLPQAERHAILAAQAANALDLYQSVADSVNEVATSE
CCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA