| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222523970
Identifier: 222523970
GI number: 222523970
Start: 850553
End: 851629
Strand: Direct
Name: 222523970
Synonym: Chy400_0685
Alternate gene names: NA
Gene position: 850553-851629 (Clockwise)
Preceding gene: 222523968
Following gene: 222523971
Centisome position: 16.14
GC content: 57.94
Gene sequence:
>1077_bases ATGGCGCGCCAGTTACGGCTTGCCTTGCTCGTGGTGTGGATTGTGTTGTTCAGCGGATGTAGCGCTGTCACCACACCAAC CCCCACTACCGCTCCCGTCACCAGCAACCTCAGCGGCATCAAAGATTATCTGCTCGGCCAGACACGTGCGCTGGTCACGG CTACCGCTGACCTGCAAACAGCCAGTAACCGTTACTACGACCTTGCGCAGGCGACCAATTTTGACTATGCCAGCCTCTGG CAAAACCAGCAGCGTGAGGTGATTGCAGCCCTTAACGCAGCTCGTGAAGCGTGGATTACTGCCAGCCCAATCTACGAGAA GATGGAAGGTATCGTCGCCGGTACACCGGCACTCGCTCAATTCGACGTTGATCTCGATGCCGGTGCCGCCGGCAGTGAAG ACCCTGAAAACGCGGTCTCTTTCGACCTCGTCTTGCCCGATGGACGCACCCTGCCCAAGCCAGGAAACCTGTTTGGTGTG ACTGAAAGCACGCTATGGGGTACTGATCCGGCTTTTGCCGCGCCGGTTAGCGCGGATTGGAACGGCGATGGCACGATTGA ATTCGGCGAAACCCTGCCCGATGCCAATGTGTTGAAAGCCAGTGCCGATCTGCTGGCCCAAATGGCGAACGATCTGGATA GCACCGCACAGAACTGGACACCAACCGAATCGGATGCCTTTACCGCGCTGGTGGTGATGGTTCCTACTATGAGCGAATAC TTTGCTTCGTGGCGCGATTCGCGCTTTGTCCTGGGTGACGCTTCAACGCAGCGTGATTTTAATGTCATTTCGCGTCTGGC CGATATTCAAGATATTCTAAGCGGGCTTGAGGTTGTCTATGCGCAAGTGCGCCCACGGGTAGAGGCGGTCGATCCTGCCC AGGCAGAGCAGATCGCAACCGGTCTGCGTGATCTGCGCGCCTTTGTGGCCGATATTTACACGCAAGAGCGCAATGGGCGA CGCTTTAGCCCGGAAGAGGCGGACACGCTAGGCGCTGAGGCGCAAAATCGGGCCACTGCCATTACCGGTCAGATCAGCCA GATGGCCGGCGCCCTTGGGGTCACCCTGGCGGAATAA
Upstream 100 bases:
>100_bases AACTTCTTTTATTAGAGTATGCTAACCGCAAACATTCACACGTGCTCGATGAAGAGCAAACCCCAGATGCCTGTGTCCTG TCGAATACAAAGGAGGAACT
Downstream 100 bases:
>100_bases GCCCTGCACGCGCTTATCTGAGAAAGCCTGGTGGCGCAGGTCATGCCTGCGCCAAATATTCCGATAGACGTTCAGCCAGA GAATCAGGAAGGTTCCTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MARQLRLALLVVWIVLFSGCSAVTTPTPTTAPVTSNLSGIKDYLLGQTRALVTATADLQTASNRYYDLAQATNFDYASLW QNQQREVIAALNAAREAWITASPIYEKMEGIVAGTPALAQFDVDLDAGAAGSEDPENAVSFDLVLPDGRTLPKPGNLFGV TESTLWGTDPAFAAPVSADWNGDGTIEFGETLPDANVLKASADLLAQMANDLDSTAQNWTPTESDAFTALVVMVPTMSEY FASWRDSRFVLGDASTQRDFNVISRLADIQDILSGLEVVYAQVRPRVEAVDPAQAEQIATGLRDLRAFVADIYTQERNGR RFSPEEADTLGAEAQNRATAITGQISQMAGALGVTLAE
Sequences:
>Translated_358_residues MARQLRLALLVVWIVLFSGCSAVTTPTPTTAPVTSNLSGIKDYLLGQTRALVTATADLQTASNRYYDLAQATNFDYASLW QNQQREVIAALNAAREAWITASPIYEKMEGIVAGTPALAQFDVDLDAGAAGSEDPENAVSFDLVLPDGRTLPKPGNLFGV TESTLWGTDPAFAAPVSADWNGDGTIEFGETLPDANVLKASADLLAQMANDLDSTAQNWTPTESDAFTALVVMVPTMSEY FASWRDSRFVLGDASTQRDFNVISRLADIQDILSGLEVVYAQVRPRVEAVDPAQAEQIATGLRDLRAFVADIYTQERNGR RFSPEEADTLGAEAQNRATAITGQISQMAGALGVTLAE >Mature_357_residues ARQLRLALLVVWIVLFSGCSAVTTPTPTTAPVTSNLSGIKDYLLGQTRALVTATADLQTASNRYYDLAQATNFDYASLWQ NQQREVIAALNAAREAWITASPIYEKMEGIVAGTPALAQFDVDLDAGAAGSEDPENAVSFDLVLPDGRTLPKPGNLFGVT ESTLWGTDPAFAAPVSADWNGDGTIEFGETLPDANVLKASADLLAQMANDLDSTAQNWTPTESDAFTALVVMVPTMSEYF ASWRDSRFVLGDASTQRDFNVISRLADIQDILSGLEVVYAQVRPRVEAVDPAQAEQIATGLRDLRAFVADIYTQERNGRR FSPEEADTLGAEAQNRATAITGQISQMAGALGVTLAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38420; Mature: 38289
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00189 LIPOYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARQLRLALLVVWIVLFSGCSAVTTPTPTTAPVTSNLSGIKDYLLGQTRALVTATADLQT CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHH ASNRYYDLAQATNFDYASLWQNQQREVIAALNAAREAWITASPIYEKMEGIVAGTPALAQ HCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEE FDVDLDAGAAGSEDPENAVSFDLVLPDGRTLPKPGNLFGVTESTLWGTDPAFAAPVSADW EECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC NGDGTIEFGETLPDANVLKASADLLAQMANDLDSTAQNWTPTESDAFTALVVMVPTMSEY CCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEHHHHHHHHH FASWRDSRFVLGDASTQRDFNVISRLADIQDILSGLEVVYAQVRPRVEAVDPAQAEQIAT HHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH GLRDLRAFVADIYTQERNGRRFSPEEADTLGAEAQNRATAITGQISQMAGALGVTLAE HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHCCHHHHHHHHHHHHHHHCCEECC >Mature Secondary Structure ARQLRLALLVVWIVLFSGCSAVTTPTPTTAPVTSNLSGIKDYLLGQTRALVTATADLQT CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHH ASNRYYDLAQATNFDYASLWQNQQREVIAALNAAREAWITASPIYEKMEGIVAGTPALAQ HCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEE FDVDLDAGAAGSEDPENAVSFDLVLPDGRTLPKPGNLFGVTESTLWGTDPAFAAPVSADW EECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC NGDGTIEFGETLPDANVLKASADLLAQMANDLDSTAQNWTPTESDAFTALVVMVPTMSEY CCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEHHHHHHHHH FASWRDSRFVLGDASTQRDFNVISRLADIQDILSGLEVVYAQVRPRVEAVDPAQAEQIAT HHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH GLRDLRAFVADIYTQERNGRRFSPEEADTLGAEAQNRATAITGQISQMAGALGVTLAE HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHCCHHHHHHHHHHHHHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA