Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222523961

Identifier: 222523961

GI number: 222523961

Start: 838795

End: 840030

Strand: Direct

Name: 222523961

Synonym: Chy400_0676

Alternate gene names: NA

Gene position: 838795-840030 (Clockwise)

Preceding gene: 222523960

Following gene: 222523962

Centisome position: 15.92

GC content: 56.8

Gene sequence:

>1236_bases
ATGGCGACGACAAGTATCTCACAGACCCGTATTCCCCAGCTCGGCCAGGTACAGATGCTTGGCCTGGCCGCTGCTGTGAT
TGGTATCGGCGTTCTGGCCGCCGGCTATTTTCTCAGTCCGACCTCGTTTTTCGAGTCGTACATTTATGGTTACTACGTGG
CAATGACGATCCCTCTCGGCTGCCTGGGCTTTCTGATGGTGCAGCACCTGACCGGAGGCGCGTGGGGGGTGACGGTACGC
CGGATGCTGGAAGCCGGTGCTGCTACGTTGCCGATTATGGGCTTGCTCTTCATTCCGATTGCCCTCGGTTATTTTGATAC
GTACAAGGCGCTGGGGCTAGAGCATCCGCTCTACGAGTGGGCCAACCCGGAAGTGGTAACCCCTGGTGGCGCCGAGTTCG
ATCCTATCATTGCCCACAAGGTCCCCTGGCTTAGCCCGTTGTGGGTGACCGCCCGAATCGCGATCTTTTTCATCATCTGG
TCGGCTCTGGCTCTGACCCTGCGTGCATGGTCGCGACAGCAGGATGCCGGCGGTGATGCGAAGAAGCTGGCAACCCGGAT
GCGCCGTCTGAGTGGCATCGGTGTTGCGCTGTTTGTGATCACGGTGACCTTCTTCTCGTTCGATGTGGCAATGTCACTCG
ATCCGCACTGGTTCTCGACCATCTACGGTGCGCACTATATGGCGAATGCCGGGTTGATGACGCTGGCATTTCTGGCCTTG
ATGATGAGCCGCGTCCGTGATGCCGCGCTCTTCCGCGAGTATGTCTCGGTTAAACCGATCCACGACATCGGGAAATTGAT
ATTTGCCTTCACCGTGCTGTGGACGTATATGTCCTACGGTCAGTTGGTTATTATCTGGTCGGGTGATGTGGCCGAGTTTA
CGCCCTGGTATGTTCACCGGACGCAGCACGGCTGGGTTTTTGTCGCGCTGGCCCTGATGCTCTTCGCCTTCGCGTTACCG
TTCTTTGTCTTGCTGTTCCGCGGTACGAAGCGCAACCTGAACACACTAGCGACGATTGCGGGCTGGATTGTGGTGATGCG
CTTTGTTGATATGGCCTGGATTATCCTCCCCGAATTTCGCGAACATCTGTGGGATATTGCAATTACCGACGTGGCAGCAC
CTATCGGGCTGATCGGCCTGGTCATTGCTCTGTTCGCTGCAAACGTCCAACAGGCACCACTGCTACCGCTGCGCGATCCA
AATATGGAGCAGTTACAGAACAGCGGTCACCACTAA

Upstream 100 bases:

>100_bases
TTATATCCGGGCCTTGCAGTTGAGCCAAAATGCAACTATTGATGATGTTCCTCCCGATCAGCGTGCACAGCTTGGTAATT
AGGCTGGAAGGTTAGAATCC

Downstream 100 bases:

>100_bases
CGTAGAGGAGTGTGAAGTATGAGCTATCGCCCGAACTATTCTGCATCACGATATACTGCCGGACGACCTGCACAGCCGGT
TCGCACGGCTCGCACAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MATTSISQTRIPQLGQVQMLGLAAAVIGIGVLAAGYFLSPTSFFESYIYGYYVAMTIPLGCLGFLMVQHLTGGAWGVTVR
RMLEAGAATLPIMGLLFIPIALGYFDTYKALGLEHPLYEWANPEVVTPGGAEFDPIIAHKVPWLSPLWVTARIAIFFIIW
SALALTLRAWSRQQDAGGDAKKLATRMRRLSGIGVALFVITVTFFSFDVAMSLDPHWFSTIYGAHYMANAGLMTLAFLAL
MMSRVRDAALFREYVSVKPIHDIGKLIFAFTVLWTYMSYGQLVIIWSGDVAEFTPWYVHRTQHGWVFVALALMLFAFALP
FFVLLFRGTKRNLNTLATIAGWIVVMRFVDMAWIILPEFREHLWDIAITDVAAPIGLIGLVIALFAANVQQAPLLPLRDP
NMEQLQNSGHH

Sequences:

>Translated_411_residues
MATTSISQTRIPQLGQVQMLGLAAAVIGIGVLAAGYFLSPTSFFESYIYGYYVAMTIPLGCLGFLMVQHLTGGAWGVTVR
RMLEAGAATLPIMGLLFIPIALGYFDTYKALGLEHPLYEWANPEVVTPGGAEFDPIIAHKVPWLSPLWVTARIAIFFIIW
SALALTLRAWSRQQDAGGDAKKLATRMRRLSGIGVALFVITVTFFSFDVAMSLDPHWFSTIYGAHYMANAGLMTLAFLAL
MMSRVRDAALFREYVSVKPIHDIGKLIFAFTVLWTYMSYGQLVIIWSGDVAEFTPWYVHRTQHGWVFVALALMLFAFALP
FFVLLFRGTKRNLNTLATIAGWIVVMRFVDMAWIILPEFREHLWDIAITDVAAPIGLIGLVIALFAANVQQAPLLPLRDP
NMEQLQNSGHH
>Mature_410_residues
ATTSISQTRIPQLGQVQMLGLAAAVIGIGVLAAGYFLSPTSFFESYIYGYYVAMTIPLGCLGFLMVQHLTGGAWGVTVRR
MLEAGAATLPIMGLLFIPIALGYFDTYKALGLEHPLYEWANPEVVTPGGAEFDPIIAHKVPWLSPLWVTARIAIFFIIWS
ALALTLRAWSRQQDAGGDAKKLATRMRRLSGIGVALFVITVTFFSFDVAMSLDPHWFSTIYGAHYMANAGLMTLAFLALM
MSRVRDAALFREYVSVKPIHDIGKLIFAFTVLWTYMSYGQLVIIWSGDVAEFTPWYVHRTQHGWVFVALALMLFAFALPF
FVLLFRGTKRNLNTLATIAGWIVVMRFVDMAWIILPEFREHLWDIAITDVAAPIGLIGLVIALFAANVQQAPLLPLRDPN
MEQLQNSGHH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45687; Mature: 45555

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure 
ATTSISQTRIPQLGQVQMLGLAAAVIGIGVLAAGYFLSPTSFFESYIYGYYVAMTIPLG
CCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
CLGFLMVQHLTGGAWGVTVRRMLEAGAATLPIMGLLFIPIALGYFDTYKALGLEHPLYEW
HHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHC
ANPEVVTPGGAEFDPIIAHKVPWLSPLWVTARIAIFFIIWSALALTLRAWSRQQDAGGDA
CCCCEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
KKLATRMRRLSGIGVALFVITVTFFSFDVAMSLDPHWFSTIYGAHYMANAGLMTLAFLAL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
MMSRVRDAALFREYVSVKPIHDIGKLIFAFTVLWTYMSYGQLVIIWSGDVAEFTPWYVHR
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHEEE
TQHGWVFVALALMLFAFALPFFVLLFRGTKRNLNTLATIAGWIVVMRFVDMAWIILPEFR
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHLWDIAITDVAAPIGLIGLVIALFAANVQQAPLLPLRDPNMEQLQNSGHH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA