Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222523958

Identifier: 222523958

GI number: 222523958

Start: 836136

End: 837596

Strand: Direct

Name: 222523958

Synonym: Chy400_0673

Alternate gene names: NA

Gene position: 836136-837596 (Clockwise)

Preceding gene: 222523957

Following gene: 222523959

Centisome position: 15.87

GC content: 56.81

Gene sequence:

>1461_bases
ATGGCACAGGCGCAACCACTCCGCACCCGGCCACAAGACGATGGCGAAGCCTATCTGTTGCCGGGAGAAACCTACACATC
GATCTCTGCGAAGATCGGTGATGTACCCCTTACGCCGCCGCTGAAGACACCAAAGGGCTGGCTAGCCGGCTTCAGCGTGG
CATTCTTCATGTTGATGATCTTCTTTGTGTCGGTGACGTGGCTGTTCATCCGCGGCGTCGGTATCTGGGGTATCAATATC
CCGGTCGGCTGGGGCATGGACATCATCAACTTCGTGTGGTGGATCGGTATCGGTCACGCCGGTACGCTCATCTCGGCAAT
CTTGTTGCTGCTCAACCAGGGCTGGCGCAACTCGATCAACCGCTTTGCCGAGGCAATGACGCTGTTCGCAGTGGCCTGTG
CCGGTCTCTACCCGATTCTGCACCTTGGGCGGCCATGGCTCTTCTACTGGCTGATCCCGTACCCCAACACCCACGGCATG
TGGCCACAGTTCCGCAGCGCGTTGGCCTGGGACGTGTTCGCAATTTCGACCTACGCAACTGTGTCGCTGGTGTTCTGGCT
GGTAGGTCTGATCCCCGACTTCGCTACGCTGCGTGATCGAGCGAAGAATATTTGGGTGAAGCGACTGTACGGCATTGCTG
CCCTTGGCTGGCGCGGATCGGCTCGTCACTGGCACCGCTACGAGATGGCTTCGATCTTGCTGGCAGGTCTCTCAACGCCG
CTGGTGGTGTCGGTACACTCAATCATTTCGCTCGACTTCGCCATTTCGCAGGTGCCCGGCTGGCAGGTTACCGTCTTCCC
ACCCTACTTCGTGGCCGGTGCCGTGTTCGCCGGTTTCGCGATGGTACTCCTGCTCATGATCCCGGTACGCACCTTCTACG
GCTTTGAGAACTACATTACCCTGCACCATCTTGATGTGATGGCGAAGGTTATGCTCACGACCGGGATGATTGTCGTGTAC
GGGTACTTCATGGAGGTCTTTGCCTCGCTCTACAGCGGTAATGAGTTCGAGGAATACCTCTTGTACAACCGTCTGTTTGG
ACCAAGCTCGTGGGCGTACTGGGGGTTGCTCTTCTGTAACGCAGTGGCGATTCAGCCGCTCTGGTTCAAGAAGGTGCGGC
AGAATATACCGGCCTTGCTGATTATCTCCTTGATTGTTAGCGTCGGTATGTGGCTTGAGCGTTACGTGATTATCGTGATT
TCGCTCGAACGCGACTTCTTGCCGTCGTCATGGGATATTTATATTCCCACGATTTGGGACTGGTCGCTCTACATTGGCAC
CTTCGGCCTCTTCTTCACGCTGCTCTTCCTCTTCATCCGTGTCTTGCCGATGATTAACATCTTTGAGATGCGGTTGTTCC
TCTATCAGGAAACGGAGAAGGCAAAGCAGCGGGCAGGGCATGGCGCGCACGGCCACGGGCACGAGCAAAGCCCGGCGCAT
GGTGCAGCGACAGCAGACTAA

Upstream 100 bases:

>100_bases
ACTACGGCCTGTTGGGCTTCCTGAACACCGTCCCGCGCACGACATATCTGGCCCGTGTCCGCAATCCGTCTGAGGAACTA
GAAAAGGTGGAAGGCTAGCG

Downstream 100 bases:

>100_bases
AAGGAGTGAGGCGATGCGTAACGATGTGTACGGCGTGATGGCTGAGTTTCCCACGCCAGAGGCATTAATTGAAGCAACTC
GCAAGGCTAAGGCAGCCGGC

Product: polysulfide reductase NrfD

Products: NA

Alternate protein names: Molybdopterin Oxidoredutase Membrane Subunit; Molybdopterin Oxidoreductase; Molybdopterin Oxidoreductase Membrane Subunit; NrfD Family Oxidoreductase Membrane Subunit; Polysulphide Reductase; Polysulphide Reductase NrfD Superfamily; Polysulphide Reductase Nrfd; Oxidoreductase Membrane Subunit; Oxidoredutase Membrane Subunit Nrfd Family; Anaerobic Dehydrogenase Membrane Anchor Subunit

Number of amino acids: Translated: 486; Mature: 485

Protein sequence:

>486_residues
MAQAQPLRTRPQDDGEAYLLPGETYTSISAKIGDVPLTPPLKTPKGWLAGFSVAFFMLMIFFVSVTWLFIRGVGIWGINI
PVGWGMDIINFVWWIGIGHAGTLISAILLLLNQGWRNSINRFAEAMTLFAVACAGLYPILHLGRPWLFYWLIPYPNTHGM
WPQFRSALAWDVFAISTYATVSLVFWLVGLIPDFATLRDRAKNIWVKRLYGIAALGWRGSARHWHRYEMASILLAGLSTP
LVVSVHSIISLDFAISQVPGWQVTVFPPYFVAGAVFAGFAMVLLLMIPVRTFYGFENYITLHHLDVMAKVMLTTGMIVVY
GYFMEVFASLYSGNEFEEYLLYNRLFGPSSWAYWGLLFCNAVAIQPLWFKKVRQNIPALLIISLIVSVGMWLERYVIIVI
SLERDFLPSSWDIYIPTIWDWSLYIGTFGLFFTLLFLFIRVLPMINIFEMRLFLYQETEKAKQRAGHGAHGHGHEQSPAH
GAATAD

Sequences:

>Translated_486_residues
MAQAQPLRTRPQDDGEAYLLPGETYTSISAKIGDVPLTPPLKTPKGWLAGFSVAFFMLMIFFVSVTWLFIRGVGIWGINI
PVGWGMDIINFVWWIGIGHAGTLISAILLLLNQGWRNSINRFAEAMTLFAVACAGLYPILHLGRPWLFYWLIPYPNTHGM
WPQFRSALAWDVFAISTYATVSLVFWLVGLIPDFATLRDRAKNIWVKRLYGIAALGWRGSARHWHRYEMASILLAGLSTP
LVVSVHSIISLDFAISQVPGWQVTVFPPYFVAGAVFAGFAMVLLLMIPVRTFYGFENYITLHHLDVMAKVMLTTGMIVVY
GYFMEVFASLYSGNEFEEYLLYNRLFGPSSWAYWGLLFCNAVAIQPLWFKKVRQNIPALLIISLIVSVGMWLERYVIIVI
SLERDFLPSSWDIYIPTIWDWSLYIGTFGLFFTLLFLFIRVLPMINIFEMRLFLYQETEKAKQRAGHGAHGHGHEQSPAH
GAATAD
>Mature_485_residues
AQAQPLRTRPQDDGEAYLLPGETYTSISAKIGDVPLTPPLKTPKGWLAGFSVAFFMLMIFFVSVTWLFIRGVGIWGINIP
VGWGMDIINFVWWIGIGHAGTLISAILLLLNQGWRNSINRFAEAMTLFAVACAGLYPILHLGRPWLFYWLIPYPNTHGMW
PQFRSALAWDVFAISTYATVSLVFWLVGLIPDFATLRDRAKNIWVKRLYGIAALGWRGSARHWHRYEMASILLAGLSTPL
VVSVHSIISLDFAISQVPGWQVTVFPPYFVAGAVFAGFAMVLLLMIPVRTFYGFENYITLHHLDVMAKVMLTTGMIVVYG
YFMEVFASLYSGNEFEEYLLYNRLFGPSSWAYWGLLFCNAVAIQPLWFKKVRQNIPALLIISLIVSVGMWLERYVIIVIS
LERDFLPSSWDIYIPTIWDWSLYIGTFGLFFTLLFLFIRVLPMINIFEMRLFLYQETEKAKQRAGHGAHGHGHEQSPAHG
AATAD

Specific function: Unknown

COG id: COG5557

COG function: function code C; Polysulphide reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55181; Mature: 55049

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQAQPLRTRPQDDGEAYLLPGETYTSISAKIGDVPLTPPLKTPKGWLAGFSVAFFMLMI
CCCCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
FFVSVTWLFIRGVGIWGINIPVGWGMDIINFVWWIGIGHAGTLISAILLLLNQGWRNSIN
HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH
RFAEAMTLFAVACAGLYPILHLGRPWLFYWLIPYPNTHGMWPQFRSALAWDVFAISTYAT
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
VSLVFWLVGLIPDFATLRDRAKNIWVKRLYGIAALGWRGSARHWHRYEMASILLAGLSTP
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCH
LVVSVHSIISLDFAISQVPGWQVTVFPPYFVAGAVFAGFAMVLLLMIPVRTFYGFENYIT
HHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEH
LHHLDVMAKVMLTTGMIVVYGYFMEVFASLYSGNEFEEYLLYNRLFGPSSWAYWGLLFCN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
AVAIQPLWFKKVRQNIPALLIISLIVSVGMWLERYVIIVISLERDFLPSSWDIYIPTIWD
HHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCEEEEEEEH
WSLYIGTFGLFFTLLFLFIRVLPMINIFEMRLFLYQETEKAKQRAGHGAHGHGHEQSPAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GAATAD
CCCCCC
>Mature Secondary Structure 
AQAQPLRTRPQDDGEAYLLPGETYTSISAKIGDVPLTPPLKTPKGWLAGFSVAFFMLMI
CCCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
FFVSVTWLFIRGVGIWGINIPVGWGMDIINFVWWIGIGHAGTLISAILLLLNQGWRNSIN
HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH
RFAEAMTLFAVACAGLYPILHLGRPWLFYWLIPYPNTHGMWPQFRSALAWDVFAISTYAT
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
VSLVFWLVGLIPDFATLRDRAKNIWVKRLYGIAALGWRGSARHWHRYEMASILLAGLSTP
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCH
LVVSVHSIISLDFAISQVPGWQVTVFPPYFVAGAVFAGFAMVLLLMIPVRTFYGFENYIT
HHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEH
LHHLDVMAKVMLTTGMIVVYGYFMEVFASLYSGNEFEEYLLYNRLFGPSSWAYWGLLFCN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
AVAIQPLWFKKVRQNIPALLIISLIVSVGMWLERYVIIVISLERDFLPSSWDIYIPTIWD
HHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCEEEEEEEH
WSLYIGTFGLFFTLLFLFIRVLPMINIFEMRLFLYQETEKAKQRAGHGAHGHGHEQSPAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GAATAD
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA