| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523958
Identifier: 222523958
GI number: 222523958
Start: 836136
End: 837596
Strand: Direct
Name: 222523958
Synonym: Chy400_0673
Alternate gene names: NA
Gene position: 836136-837596 (Clockwise)
Preceding gene: 222523957
Following gene: 222523959
Centisome position: 15.87
GC content: 56.81
Gene sequence:
>1461_bases ATGGCACAGGCGCAACCACTCCGCACCCGGCCACAAGACGATGGCGAAGCCTATCTGTTGCCGGGAGAAACCTACACATC GATCTCTGCGAAGATCGGTGATGTACCCCTTACGCCGCCGCTGAAGACACCAAAGGGCTGGCTAGCCGGCTTCAGCGTGG CATTCTTCATGTTGATGATCTTCTTTGTGTCGGTGACGTGGCTGTTCATCCGCGGCGTCGGTATCTGGGGTATCAATATC CCGGTCGGCTGGGGCATGGACATCATCAACTTCGTGTGGTGGATCGGTATCGGTCACGCCGGTACGCTCATCTCGGCAAT CTTGTTGCTGCTCAACCAGGGCTGGCGCAACTCGATCAACCGCTTTGCCGAGGCAATGACGCTGTTCGCAGTGGCCTGTG CCGGTCTCTACCCGATTCTGCACCTTGGGCGGCCATGGCTCTTCTACTGGCTGATCCCGTACCCCAACACCCACGGCATG TGGCCACAGTTCCGCAGCGCGTTGGCCTGGGACGTGTTCGCAATTTCGACCTACGCAACTGTGTCGCTGGTGTTCTGGCT GGTAGGTCTGATCCCCGACTTCGCTACGCTGCGTGATCGAGCGAAGAATATTTGGGTGAAGCGACTGTACGGCATTGCTG CCCTTGGCTGGCGCGGATCGGCTCGTCACTGGCACCGCTACGAGATGGCTTCGATCTTGCTGGCAGGTCTCTCAACGCCG CTGGTGGTGTCGGTACACTCAATCATTTCGCTCGACTTCGCCATTTCGCAGGTGCCCGGCTGGCAGGTTACCGTCTTCCC ACCCTACTTCGTGGCCGGTGCCGTGTTCGCCGGTTTCGCGATGGTACTCCTGCTCATGATCCCGGTACGCACCTTCTACG GCTTTGAGAACTACATTACCCTGCACCATCTTGATGTGATGGCGAAGGTTATGCTCACGACCGGGATGATTGTCGTGTAC GGGTACTTCATGGAGGTCTTTGCCTCGCTCTACAGCGGTAATGAGTTCGAGGAATACCTCTTGTACAACCGTCTGTTTGG ACCAAGCTCGTGGGCGTACTGGGGGTTGCTCTTCTGTAACGCAGTGGCGATTCAGCCGCTCTGGTTCAAGAAGGTGCGGC AGAATATACCGGCCTTGCTGATTATCTCCTTGATTGTTAGCGTCGGTATGTGGCTTGAGCGTTACGTGATTATCGTGATT TCGCTCGAACGCGACTTCTTGCCGTCGTCATGGGATATTTATATTCCCACGATTTGGGACTGGTCGCTCTACATTGGCAC CTTCGGCCTCTTCTTCACGCTGCTCTTCCTCTTCATCCGTGTCTTGCCGATGATTAACATCTTTGAGATGCGGTTGTTCC TCTATCAGGAAACGGAGAAGGCAAAGCAGCGGGCAGGGCATGGCGCGCACGGCCACGGGCACGAGCAAAGCCCGGCGCAT GGTGCAGCGACAGCAGACTAA
Upstream 100 bases:
>100_bases ACTACGGCCTGTTGGGCTTCCTGAACACCGTCCCGCGCACGACATATCTGGCCCGTGTCCGCAATCCGTCTGAGGAACTA GAAAAGGTGGAAGGCTAGCG
Downstream 100 bases:
>100_bases AAGGAGTGAGGCGATGCGTAACGATGTGTACGGCGTGATGGCTGAGTTTCCCACGCCAGAGGCATTAATTGAAGCAACTC GCAAGGCTAAGGCAGCCGGC
Product: polysulfide reductase NrfD
Products: NA
Alternate protein names: Molybdopterin Oxidoredutase Membrane Subunit; Molybdopterin Oxidoreductase; Molybdopterin Oxidoreductase Membrane Subunit; NrfD Family Oxidoreductase Membrane Subunit; Polysulphide Reductase; Polysulphide Reductase NrfD Superfamily; Polysulphide Reductase Nrfd; Oxidoreductase Membrane Subunit; Oxidoredutase Membrane Subunit Nrfd Family; Anaerobic Dehydrogenase Membrane Anchor Subunit
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MAQAQPLRTRPQDDGEAYLLPGETYTSISAKIGDVPLTPPLKTPKGWLAGFSVAFFMLMIFFVSVTWLFIRGVGIWGINI PVGWGMDIINFVWWIGIGHAGTLISAILLLLNQGWRNSINRFAEAMTLFAVACAGLYPILHLGRPWLFYWLIPYPNTHGM WPQFRSALAWDVFAISTYATVSLVFWLVGLIPDFATLRDRAKNIWVKRLYGIAALGWRGSARHWHRYEMASILLAGLSTP LVVSVHSIISLDFAISQVPGWQVTVFPPYFVAGAVFAGFAMVLLLMIPVRTFYGFENYITLHHLDVMAKVMLTTGMIVVY GYFMEVFASLYSGNEFEEYLLYNRLFGPSSWAYWGLLFCNAVAIQPLWFKKVRQNIPALLIISLIVSVGMWLERYVIIVI SLERDFLPSSWDIYIPTIWDWSLYIGTFGLFFTLLFLFIRVLPMINIFEMRLFLYQETEKAKQRAGHGAHGHGHEQSPAH GAATAD
Sequences:
>Translated_486_residues MAQAQPLRTRPQDDGEAYLLPGETYTSISAKIGDVPLTPPLKTPKGWLAGFSVAFFMLMIFFVSVTWLFIRGVGIWGINI PVGWGMDIINFVWWIGIGHAGTLISAILLLLNQGWRNSINRFAEAMTLFAVACAGLYPILHLGRPWLFYWLIPYPNTHGM WPQFRSALAWDVFAISTYATVSLVFWLVGLIPDFATLRDRAKNIWVKRLYGIAALGWRGSARHWHRYEMASILLAGLSTP LVVSVHSIISLDFAISQVPGWQVTVFPPYFVAGAVFAGFAMVLLLMIPVRTFYGFENYITLHHLDVMAKVMLTTGMIVVY GYFMEVFASLYSGNEFEEYLLYNRLFGPSSWAYWGLLFCNAVAIQPLWFKKVRQNIPALLIISLIVSVGMWLERYVIIVI SLERDFLPSSWDIYIPTIWDWSLYIGTFGLFFTLLFLFIRVLPMINIFEMRLFLYQETEKAKQRAGHGAHGHGHEQSPAH GAATAD >Mature_485_residues AQAQPLRTRPQDDGEAYLLPGETYTSISAKIGDVPLTPPLKTPKGWLAGFSVAFFMLMIFFVSVTWLFIRGVGIWGINIP VGWGMDIINFVWWIGIGHAGTLISAILLLLNQGWRNSINRFAEAMTLFAVACAGLYPILHLGRPWLFYWLIPYPNTHGMW PQFRSALAWDVFAISTYATVSLVFWLVGLIPDFATLRDRAKNIWVKRLYGIAALGWRGSARHWHRYEMASILLAGLSTPL VVSVHSIISLDFAISQVPGWQVTVFPPYFVAGAVFAGFAMVLLLMIPVRTFYGFENYITLHHLDVMAKVMLTTGMIVVYG YFMEVFASLYSGNEFEEYLLYNRLFGPSSWAYWGLLFCNAVAIQPLWFKKVRQNIPALLIISLIVSVGMWLERYVIIVIS LERDFLPSSWDIYIPTIWDWSLYIGTFGLFFTLLFLFIRVLPMINIFEMRLFLYQETEKAKQRAGHGAHGHGHEQSPAHG AATAD
Specific function: Unknown
COG id: COG5557
COG function: function code C; Polysulphide reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55181; Mature: 55049
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQAQPLRTRPQDDGEAYLLPGETYTSISAKIGDVPLTPPLKTPKGWLAGFSVAFFMLMI CCCCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH FFVSVTWLFIRGVGIWGINIPVGWGMDIINFVWWIGIGHAGTLISAILLLLNQGWRNSIN HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH RFAEAMTLFAVACAGLYPILHLGRPWLFYWLIPYPNTHGMWPQFRSALAWDVFAISTYAT HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH VSLVFWLVGLIPDFATLRDRAKNIWVKRLYGIAALGWRGSARHWHRYEMASILLAGLSTP HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCH LVVSVHSIISLDFAISQVPGWQVTVFPPYFVAGAVFAGFAMVLLLMIPVRTFYGFENYIT HHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEH LHHLDVMAKVMLTTGMIVVYGYFMEVFASLYSGNEFEEYLLYNRLFGPSSWAYWGLLFCN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHH AVAIQPLWFKKVRQNIPALLIISLIVSVGMWLERYVIIVISLERDFLPSSWDIYIPTIWD HHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCEEEEEEEH WSLYIGTFGLFFTLLFLFIRVLPMINIFEMRLFLYQETEKAKQRAGHGAHGHGHEQSPAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GAATAD CCCCCC >Mature Secondary Structure AQAQPLRTRPQDDGEAYLLPGETYTSISAKIGDVPLTPPLKTPKGWLAGFSVAFFMLMI CCCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH FFVSVTWLFIRGVGIWGINIPVGWGMDIINFVWWIGIGHAGTLISAILLLLNQGWRNSIN HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH RFAEAMTLFAVACAGLYPILHLGRPWLFYWLIPYPNTHGMWPQFRSALAWDVFAISTYAT HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH VSLVFWLVGLIPDFATLRDRAKNIWVKRLYGIAALGWRGSARHWHRYEMASILLAGLSTP HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCH LVVSVHSIISLDFAISQVPGWQVTVFPPYFVAGAVFAGFAMVLLLMIPVRTFYGFENYIT HHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEH LHHLDVMAKVMLTTGMIVVYGYFMEVFASLYSGNEFEEYLLYNRLFGPSSWAYWGLLFCN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHH AVAIQPLWFKKVRQNIPALLIISLIVSVGMWLERYVIIVISLERDFLPSSWDIYIPTIWD HHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCEEEEEEEH WSLYIGTFGLFFTLLFLFIRVLPMINIFEMRLFLYQETEKAKQRAGHGAHGHGHEQSPAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GAATAD CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA