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The map label for this gene is yufP [H]

Identifier: 222523860

GI number: 222523860

Start: 679830

End: 680969

Strand: Direct

Name: yufP [H]

Synonym: Chy400_0568

Alternate gene names: 222523860

Gene position: 679830-680969 (Clockwise)

Preceding gene: 222523859

Following gene: 222523861

Centisome position: 12.9

GC content: 59.47

Gene sequence:

>1140_bases
ATGGCGCAGGCAGCCACCGAAACGGGTATTCGCCCATCGGCGCTCCGCCAGTTTTGGGAGCGCTGGTCGGGCATTCTCGT
GCCGATCCTTGCCGTTTTTACAGCCCTGGTGGTAGGGGCCTTCATTATCGGGATTACCGGTGCCGACTGGCAGGCAGCCT
ACATTGGGCTTTGGGAAGGCGCCTTCGGCTCGCCACGGGCATTTGCCGATACGGTTGTCCGTTCTACGCCATTCATCATC
TGTGGTCTGTGCGTAGCACTTGCTTTCAAGGCCGGCCTGTTTAACATCGGCGCCGAAGGGCAACTCTACGCCGGCGCGGT
TGCTGCTGTCGTTATCGGCACAACCTTGCAGATGCCGGCAATCTTTCACATTCCGGCAGCCTTGATTGCCGGTGCACTTG
GCGGTGCAGCCTGGGCAGCGATTGCCGGTTTCCTGAAGGCGCGCACCGGTGCACACGAGGTGATCAACACGATTATGTTG
AATTACATCGCGCTCCGGATGACCGACTGGCTGATTCGCAGCAAAACCCCCTACATTCTGGGTGATCCTGCCGACACCAC
CGGTGCCCGCTCGCGTTTGATTGCCGAAACGGCCCGTTTACCCGGCATTCAGGTTGGTAGCTCGACCATCCTCCACCTGG
GGATTCCCCTCGCCTTGATACTAGTCTTTGTCGTGGCCTGGTTGTTGTACCGAACGACGCTCGGCTTCGAGATGCGGACT
GCCGGTACCAACCCCAACGCCGCCCGCTACGCAGGCATCAGTGTCCCGCGCACGATTATTCTGGCAATGGCAATTGCCGG
TGGTCTGGCCGGTATCGCCGGATCAATCGAGGTGATTGGTGTGCGTGGAGCGCTCAGTGCCGACTTCTTTTCCGGCCTTG
GATTTGATGCGATTGCCGTGGCCCTATTGGCCCGTGCCAATCCGGTCGGTATCATCTTTTCGGGATTGCTCTGGGGTGGG
TTACTGACCGGTGCGCGTCTGATGCAGGTGCGCGCCAGCCTATCGATTGACGTGATCAAGATCGTGCAGGCACTCATTAT
CATGTTCGTGGCTGCCGATCAGATCGTGCGCTTTGTCTACCGTCTCCCCAAGCGCAAACCCGGCGAAGAGACCCAGCTCT
CGAAGGGATGGGGTGGCTAG

Upstream 100 bases:

>100_bases
AGAGCTTGGCCTGCTCATGGCCGGCGCAACCATAGATCGTTCGGTATCAGTTGAAGCGTAAACACTTTGTGACCGCAGGA
AAGCGGTCAGGGAGAGAAGC

Downstream 100 bases:

>100_bases
ACCGCAAGTACGTCGTCGGGGTGCATCCCGGCCATTGCTACCTCTGGAAAGAGCATAATCCTACAGCCAGTGACGGCGCT
CGCATGAGCGCCGTTCGCTA

Product: inner-membrane translocator

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MAQAATETGIRPSALRQFWERWSGILVPILAVFTALVVGAFIIGITGADWQAAYIGLWEGAFGSPRAFADTVVRSTPFII
CGLCVALAFKAGLFNIGAEGQLYAGAVAAVVIGTTLQMPAIFHIPAALIAGALGGAAWAAIAGFLKARTGAHEVINTIML
NYIALRMTDWLIRSKTPYILGDPADTTGARSRLIAETARLPGIQVGSSTILHLGIPLALILVFVVAWLLYRTTLGFEMRT
AGTNPNAARYAGISVPRTIILAMAIAGGLAGIAGSIEVIGVRGALSADFFSGLGFDAIAVALLARANPVGIIFSGLLWGG
LLTGARLMQVRASLSIDVIKIVQALIIMFVAADQIVRFVYRLPKRKPGEETQLSKGWGG

Sequences:

>Translated_379_residues
MAQAATETGIRPSALRQFWERWSGILVPILAVFTALVVGAFIIGITGADWQAAYIGLWEGAFGSPRAFADTVVRSTPFII
CGLCVALAFKAGLFNIGAEGQLYAGAVAAVVIGTTLQMPAIFHIPAALIAGALGGAAWAAIAGFLKARTGAHEVINTIML
NYIALRMTDWLIRSKTPYILGDPADTTGARSRLIAETARLPGIQVGSSTILHLGIPLALILVFVVAWLLYRTTLGFEMRT
AGTNPNAARYAGISVPRTIILAMAIAGGLAGIAGSIEVIGVRGALSADFFSGLGFDAIAVALLARANPVGIIFSGLLWGG
LLTGARLMQVRASLSIDVIKIVQALIIMFVAADQIVRFVYRLPKRKPGEETQLSKGWGG
>Mature_378_residues
AQAATETGIRPSALRQFWERWSGILVPILAVFTALVVGAFIIGITGADWQAAYIGLWEGAFGSPRAFADTVVRSTPFIIC
GLCVALAFKAGLFNIGAEGQLYAGAVAAVVIGTTLQMPAIFHIPAALIAGALGGAAWAAIAGFLKARTGAHEVINTIMLN
YIALRMTDWLIRSKTPYILGDPADTTGARSRLIAETARLPGIQVGSSTILHLGIPLALILVFVVAWLLYRTTLGFEMRTA
GTNPNAARYAGISVPRTIILAMAIAGGLAGIAGSIEVIGVRGALSADFFSGLGFDAIAVALLARANPVGIIFSGLLWGGL
LTGARLMQVRASLSIDVIKIVQALIIMFVAADQIVRFVYRLPKRKPGEETQLSKGWGG

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 39771; Mature: 39639

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQAATETGIRPSALRQFWERWSGILVPILAVFTALVVGAFIIGITGADWQAAYIGLWEG
CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
AFGSPRAFADTVVRSTPFIICGLCVALAFKAGLFNIGAEGQLYAGAVAAVVIGTTLQMPA
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCH
IFHIPAALIAGALGGAAWAAIAGFLKARTGAHEVINTIMLNYIALRMTDWLIRSKTPYIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
GDPADTTGARSRLIAETARLPGIQVGSSTILHLGIPLALILVFVVAWLLYRTTLGFEMRT
CCCCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
AGTNPNAARYAGISVPRTIILAMAIAGGLAGIAGSIEVIGVRGALSADFFSGLGFDAIAV
CCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCHHHHHH
ALLARANPVGIIFSGLLWGGLLTGARLMQVRASLSIDVIKIVQALIIMFVAADQIVRFVY
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
RLPKRKPGEETQLSKGWGG
HCCCCCCCCHHCCCCCCCC
>Mature Secondary Structure 
AQAATETGIRPSALRQFWERWSGILVPILAVFTALVVGAFIIGITGADWQAAYIGLWEG
CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
AFGSPRAFADTVVRSTPFIICGLCVALAFKAGLFNIGAEGQLYAGAVAAVVIGTTLQMPA
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCH
IFHIPAALIAGALGGAAWAAIAGFLKARTGAHEVINTIMLNYIALRMTDWLIRSKTPYIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
GDPADTTGARSRLIAETARLPGIQVGSSTILHLGIPLALILVFVVAWLLYRTTLGFEMRT
CCCCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
AGTNPNAARYAGISVPRTIILAMAIAGGLAGIAGSIEVIGVRGALSADFFSGLGFDAIAV
CCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCHHHHHH
ALLARANPVGIIFSGLLWGGLLTGARLMQVRASLSIDVIKIVQALIIMFVAADQIVRFVY
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
RLPKRKPGEETQLSKGWGG
HCCCCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]