| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523833
Identifier: 222523833
GI number: 222523833
Start: 646576
End: 647529
Strand: Direct
Name: 222523833
Synonym: Chy400_0541
Alternate gene names: NA
Gene position: 646576-647529 (Clockwise)
Preceding gene: 222523831
Following gene: 222523834
Centisome position: 12.27
GC content: 48.74
Gene sequence:
>954_bases ATGAAAAACCTTTCTGGTTCACAATCTATCGAGCGCGTGGCTCCCCTCAGTGCCCGTTCCTTACAGGCACTGATCCGCAC AATGCGACCACGGCAATGGATCAAAAATATCTTCGTCTTTGCTGCAATTGCTTTTTCGGAAGGACGCCTCTGGTATACCG AGCCTGTTCAGTTACTGCGGGTTATTGGGGCATTTATCGCTTTTTGTATGGCGGCCAGTGCAATTTACCTGATTAACGAT CTGGTAGACATTGAAAAAGACCGTGCCCATCCCAAGAAACGCCATCGTCCACTGGCAGCCGGTATTCTTAGTCCCACGCT AGCGATGGTTACTGCGGCAATCCTGATCATCGCAGTTTTTCCGTTTGCATTCTGGCTCGATGGTGATCTTGATTTTATGC TGGTATTGGCTATCTATATCGCCGTCCAGGGCTTTCTCTACAGTTACTGGCTAAAGAATGTTGTCATTTTTGATATTCTG ATTATTGCGGCGGGCTTCATTTTACGGGCAGTTGCCGGTGCGGTGGTGATTGATATTGTTATTACACCCTGGCTGATTGT CTGTATGGGATTGCTGGCCCTCTTCCTCGGCATTGGTAAGCGCCGACACGAGCTAAAATTGCTTGAAGATGGTGCCGGTA ATCATCGCCGTATTCTGGACGAATACTCCATCCCGTTGCTTGATCAGATGCAGGCTATTGTGACTGCCAGTATTGTGATG GCATATAGCATGACGGCTTTCTCGGCACCGGTTGCACCCCAAAAACCGTTTCCGATGTTGATGATCACCATTCCGTTTGT CGTGTATGCCATCTTTCGTTACCTGTACCTGATCCATCAACGTGACGGTGGAGGTGCACCCGAAGACCTGGTGTTGCAAG ATCGGCCACTGGCCCTGAGTATTGTATTATGGGGCGTCACTGTATTGGGTGTTTTAGTACTGTTTCCATCGTAA
Upstream 100 bases:
>100_bases TCGCTGCTGTTTCATGCAGGTAGTGGCAGCTTTTGACGATTGACGCGCTCGTGGGGTACAATCAGGCAAGGTCTGGACTG ATGAGGATGTAACGATATCC
Downstream 100 bases:
>100_bases ACGGCTGTGTATACCTTCATCAAATTTGGTGGCTCGGTTATTACCGATAAGACAGGGCGCGAAGCTGCTGATCTGGTGGT GATCGAACGCCTGGCACACG
Product: UbiA prenyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MKNLSGSQSIERVAPLSARSLQALIRTMRPRQWIKNIFVFAAIAFSEGRLWYTEPVQLLRVIGAFIAFCMAASAIYLIND LVDIEKDRAHPKKRHRPLAAGILSPTLAMVTAAILIIAVFPFAFWLDGDLDFMLVLAIYIAVQGFLYSYWLKNVVIFDIL IIAAGFILRAVAGAVVIDIVITPWLIVCMGLLALFLGIGKRRHELKLLEDGAGNHRRILDEYSIPLLDQMQAIVTASIVM AYSMTAFSAPVAPQKPFPMLMITIPFVVYAIFRYLYLIHQRDGGGAPEDLVLQDRPLALSIVLWGVTVLGVLVLFPS
Sequences:
>Translated_317_residues MKNLSGSQSIERVAPLSARSLQALIRTMRPRQWIKNIFVFAAIAFSEGRLWYTEPVQLLRVIGAFIAFCMAASAIYLIND LVDIEKDRAHPKKRHRPLAAGILSPTLAMVTAAILIIAVFPFAFWLDGDLDFMLVLAIYIAVQGFLYSYWLKNVVIFDIL IIAAGFILRAVAGAVVIDIVITPWLIVCMGLLALFLGIGKRRHELKLLEDGAGNHRRILDEYSIPLLDQMQAIVTASIVM AYSMTAFSAPVAPQKPFPMLMITIPFVVYAIFRYLYLIHQRDGGGAPEDLVLQDRPLALSIVLWGVTVLGVLVLFPS >Mature_317_residues MKNLSGSQSIERVAPLSARSLQALIRTMRPRQWIKNIFVFAAIAFSEGRLWYTEPVQLLRVIGAFIAFCMAASAIYLIND LVDIEKDRAHPKKRHRPLAAGILSPTLAMVTAAILIIAVFPFAFWLDGDLDFMLVLAIYIAVQGFLYSYWLKNVVIFDIL IIAAGFILRAVAGAVVIDIVITPWLIVCMGLLALFLGIGKRRHELKLLEDGAGNHRRILDEYSIPLLDQMQAIVTASIVM AYSMTAFSAPVAPQKPFPMLMITIPFVVYAIFRYLYLIHQRDGGGAPEDLVLQDRPLALSIVLWGVTVLGVLVLFPS
Specific function: Possible permease/transporter [H]
COG id: COG0382
COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: NA
Molecular weight: Translated: 35240; Mature: 35240
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLSGSQSIERVAPLSARSLQALIRTMRPRQWIKNIFVFAAIAFSEGRLWYTEPVQLLR CCCCCCCHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHH VIGAFIAFCMAASAIYLINDLVDIEKDRAHPKKRHRPLAAGILSPTLAMVTAAILIIAVF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH PFAFWLDGDLDFMLVLAIYIAVQGFLYSYWLKNVVIFDILIIAAGFILRAVAGAVVIDIV HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITPWLIVCMGLLALFLGIGKRRHELKLLEDGAGNHRRILDEYSIPLLDQMQAIVTASIVM HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH AYSMTAFSAPVAPQKPFPMLMITIPFVVYAIFRYLYLIHQRDGGGAPEDLVLQDRPLALS HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHH IVLWGVTVLGVLVLFPS HHHHHHHHHHHHHHCCC >Mature Secondary Structure MKNLSGSQSIERVAPLSARSLQALIRTMRPRQWIKNIFVFAAIAFSEGRLWYTEPVQLLR CCCCCCCHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHH VIGAFIAFCMAASAIYLINDLVDIEKDRAHPKKRHRPLAAGILSPTLAMVTAAILIIAVF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH PFAFWLDGDLDFMLVLAIYIAVQGFLYSYWLKNVVIFDILIIAAGFILRAVAGAVVIDIV HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITPWLIVCMGLLALFLGIGKRRHELKLLEDGAGNHRRILDEYSIPLLDQMQAIVTASIVM HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH AYSMTAFSAPVAPQKPFPMLMITIPFVVYAIFRYLYLIHQRDGGGAPEDLVLQDRPLALS HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHH IVLWGVTVLGVLVLFPS HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]