| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is rsbX [H]
Identifier: 222523786
GI number: 222523786
Start: 587974
End: 588552
Strand: Direct
Name: rsbX [H]
Synonym: Chy400_0494
Alternate gene names: 222523786
Gene position: 587974-588552 (Clockwise)
Preceding gene: 222523785
Following gene: 222523787
Centisome position: 11.16
GC content: 52.33
Gene sequence:
>579_bases ATGAAACTCTCGTGGGGAGCAGCGCTGCGCCCAAAAGCAGGCCAACACATCAGCGGCGACGCTTATCTGGTCTTACCCTA TGCTGACAATCAACTGTTAGCTGCCGTTATTGATGGACTTGGCGGTGGCGAGGCGGCTGCTGAAGCAGCCCAGCGCGCTG TTGCCGTTCTGGAACGATATCCAACGCTTGAATTAACCGAGTTGATGCGCCAGGCTGACCGGGCACTTGTCGGTAGCCGT GGCGCGGTGATGGCGCTACTTCGTCTCAATGCCGATCAACATACTGCCGAATTTGTGGGTGTTGGGAACGTTGGCGCGCA GGTGTATAGCGATCTGCTGATAAAACCTATCTCAAAAAACGGGATTGTCGGTTATCGCCTGCCACAACTCCTGCGCCTGA GTTATACCTACAATTCTGGCGATACCTTCGTTTTATACAGTGACGGTATATCAAGTCGCTTTACTACCGAGATGCCGCCT GATTTACATCAGTCACCACAACACATTGCCGATGAGATTCTGCATCGCTTTGGCAAGGATAGCGATGATGCAACTGTGGT TGTGGTACGCAGTGAATAA
Upstream 100 bases:
>100_bases GCGTCGGTTAATGGATGATTTTCACATCCAATCAACACCAGGTCTTGGAACAACAGTACGTGCAGTGAAGTGGCGGACAA CACGCCGATAATGAGGAACT
Downstream 100 bases:
>100_bases CGGAAATTACCGACTCAGCCTATGAATCCCACACTCAGTCAATGGCTGCACACCCGGCAGACAGCTATCCTCGACAACTG GCCAGATCGAAACGAAGCCA
Product: protein serine/threonine phosphatase
Products: NA
Alternate protein names: Sigma-B negative effector [H]
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MKLSWGAALRPKAGQHISGDAYLVLPYADNQLLAAVIDGLGGGEAAAEAAQRAVAVLERYPTLELTELMRQADRALVGSR GAVMALLRLNADQHTAEFVGVGNVGAQVYSDLLIKPISKNGIVGYRLPQLLRLSYTYNSGDTFVLYSDGISSRFTTEMPP DLHQSPQHIADEILHRFGKDSDDATVVVVRSE
Sequences:
>Translated_192_residues MKLSWGAALRPKAGQHISGDAYLVLPYADNQLLAAVIDGLGGGEAAAEAAQRAVAVLERYPTLELTELMRQADRALVGSR GAVMALLRLNADQHTAEFVGVGNVGAQVYSDLLIKPISKNGIVGYRLPQLLRLSYTYNSGDTFVLYSDGISSRFTTEMPP DLHQSPQHIADEILHRFGKDSDDATVVVVRSE >Mature_192_residues MKLSWGAALRPKAGQHISGDAYLVLPYADNQLLAAVIDGLGGGEAAAEAAQRAVAVLERYPTLELTELMRQADRALVGSR GAVMALLRLNADQHTAEFVGVGNVGAQVYSDLLIKPISKNGIVGYRLPQLLRLSYTYNSGDTFVLYSDGISSRFTTEMPP DLHQSPQHIADEILHRFGKDSDDATVVVVRSE
Specific function: Negative regulator of sigma-B activity. Dephosphorylates rsbS. Plays a role both in maintaining low sigma-B activity during growth and in reestablishing prestress sigma-B activity after induction. Could have a negative feedback role by indirectly communic
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001932 - InterPro: IPR010822 [H]
Pfam domain/function: PF07228 SpoIIE [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 20736; Mature: 20736
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSWGAALRPKAGQHISGDAYLVLPYADNQLLAAVIDGLGGGEAAAEAAQRAVAVLERY CCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC PTLELTELMRQADRALVGSRGAVMALLRLNADQHTAEFVGVGNVGAQVYSDLLIKPISKN CCHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCHHHEEECCCHHHHHHHHHHHCCCCCC GIVGYRLPQLLRLSYTYNSGDTFVLYSDGISSRFTTEMPPDLHQSPQHIADEILHRFGKD CEEEECCHHHEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC SDDATVVVVRSE CCCCEEEEEECC >Mature Secondary Structure MKLSWGAALRPKAGQHISGDAYLVLPYADNQLLAAVIDGLGGGEAAAEAAQRAVAVLERY CCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC PTLELTELMRQADRALVGSRGAVMALLRLNADQHTAEFVGVGNVGAQVYSDLLIKPISKN CCHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCHHHEEECCCHHHHHHHHHHHCCCCCC GIVGYRLPQLLRLSYTYNSGDTFVLYSDGISSRFTTEMPPDLHQSPQHIADEILHRFGKD CEEEECCHHHEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC SDDATVVVVRSE CCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2170324; 9384377; 3027048; 1592822; 8468294; 8824586; 9658013 [H]