| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523734
Identifier: 222523734
GI number: 222523734
Start: 537134
End: 538492
Strand: Direct
Name: 222523734
Synonym: Chy400_0440
Alternate gene names: NA
Gene position: 537134-538492 (Clockwise)
Preceding gene: 222523733
Following gene: 222523735
Centisome position: 10.19
GC content: 56.51
Gene sequence:
>1359_bases ATGGGTCTGCTCCGTTTCGCCGTCAAGACCTTTCGCCTCTCGCTGATGCGGGTAGGCGCCGGATGGATGTTTGCCCTGCT CACGTTCAACTTCAACCGGGTGTCAATTTCAGACCTCGGCGCAATGGCAGTGATTGTTACCACCCTGATTGGTCTGCACC ACTTCATCTCGTTCTTTCAGGTGTACTGGGGGCGATTCACCGACCGTTATCCGATCTTCGGTTTACGCCGCACACCTTAC GTTATTCTGTCGAACGTAGGCGCTGCCCTTATCTTCCTCGCCTTGCCAAGTATTGCGGTTGGCCTGGGTGAGCGTTCCAT TATTGCAACTATTGAAGCCTTCGCCCTCATCTTTTTGTTCGGTGTGCTGATGGCAATGAACGGTAGCTCGTCGAATGCGC TCATTGCCGAGGTCACCACACCGAAAGAGCGCGGGGCCGTCGTCGCCTTTATCTGGGCCACGGTGATTATCAGCGGTATC GTCTCGGCTGGTATCTCGCGCGTGATTATGCCGGTCTACTCACCGGAGGCTATGCAGCAGCTTTATAACCTGACCCCAAT TATCGTGACGGTCACCGTGTTGCTGGGTGTGATCGGGCTGGAGAAGCCGATCTCGAAGGAAGAGCATCGCAAGCTGCTGG AGCAGGCTCCTGAGAAGGGCGAAGCCGGGCCGCTGGAGACGTGGCGAGTTGCGACCGGTCTGATGAAGCGGAATCCCCAG GTGCGTGGCTTTTTCGCCTTCGTACTGCTGGCAATTCTCGGTATCTTCCTGCAAGATGCAATCCTCGAACCGTTCGGGGC TGAGGTGTTCGGCATGCCGCAAAAAGACACGGCTGCATTCCAGCAGGCCTGGGGTGCCGGTGCATTGCTCGGTATGCTCG GCATTGGTATTCTCTCCAGCATCTTCCCCATCCAGAAGAAGACTATCGCTACTCTCGGTGGCCTGGGGGTAGCCGGTGGG CTGGCAATGTTGATGATTTCGGCTCTTACCCTGCACCGCGAGATTATCAGCCCGGCACTGCTCATTATGGGGTTGGGCAT CGGTCTCTTCAACGTCGGCGCACTAGCGATGATGATGGAGATGACCGTCGAAGGGCAGACCGGTCTGTATATGGGGATGT GGGGTATGGCACAAGGCCTCGGCAATGGGTTTGCCAATGTGATCAGTGGTCTTGGCCATACGGTGATGATCGAAGGTGGT CTGGTCACGCCATCGGTTGGTTATGGACTGGTGTTCGGGTTGGAAGCTCTGCTGATGGTGCTGGCTATCGGCATTTTGCG CGGTATTTCGGTGCAGGAATTCAAGGGCCTGACCCGGCAGGAGATTACAACTGCGCTGGCAATGGATGCGGCATCATAG
Upstream 100 bases:
>100_bases TCTGCCAGAAGCAATGGGTAAGACGCCCTGAAAAAATGTAGTGCAAACTCTGTGCTACACGTTGGTTCGCCTTTGACAAA GAACTAGAAAGGTGTGCGCA
Downstream 100 bases:
>100_bases CTTGCAGCGCCTGGAGAGAAGAGACCCGGCATGCCGTTACCGATCACATTTGATCAAATTGCCGATGTGTACGATGCGCA ACGTGCGCATCCCGCCGAGG
Product: PUCC protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MGLLRFAVKTFRLSLMRVGAGWMFALLTFNFNRVSISDLGAMAVIVTTLIGLHHFISFFQVYWGRFTDRYPIFGLRRTPY VILSNVGAALIFLALPSIAVGLGERSIIATIEAFALIFLFGVLMAMNGSSSNALIAEVTTPKERGAVVAFIWATVIISGI VSAGISRVIMPVYSPEAMQQLYNLTPIIVTVTVLLGVIGLEKPISKEEHRKLLEQAPEKGEAGPLETWRVATGLMKRNPQ VRGFFAFVLLAILGIFLQDAILEPFGAEVFGMPQKDTAAFQQAWGAGALLGMLGIGILSSIFPIQKKTIATLGGLGVAGG LAMLMISALTLHREIISPALLIMGLGIGLFNVGALAMMMEMTVEGQTGLYMGMWGMAQGLGNGFANVISGLGHTVMIEGG LVTPSVGYGLVFGLEALLMVLAIGILRGISVQEFKGLTRQEITTALAMDAAS
Sequences:
>Translated_452_residues MGLLRFAVKTFRLSLMRVGAGWMFALLTFNFNRVSISDLGAMAVIVTTLIGLHHFISFFQVYWGRFTDRYPIFGLRRTPY VILSNVGAALIFLALPSIAVGLGERSIIATIEAFALIFLFGVLMAMNGSSSNALIAEVTTPKERGAVVAFIWATVIISGI VSAGISRVIMPVYSPEAMQQLYNLTPIIVTVTVLLGVIGLEKPISKEEHRKLLEQAPEKGEAGPLETWRVATGLMKRNPQ VRGFFAFVLLAILGIFLQDAILEPFGAEVFGMPQKDTAAFQQAWGAGALLGMLGIGILSSIFPIQKKTIATLGGLGVAGG LAMLMISALTLHREIISPALLIMGLGIGLFNVGALAMMMEMTVEGQTGLYMGMWGMAQGLGNGFANVISGLGHTVMIEGG LVTPSVGYGLVFGLEALLMVLAIGILRGISVQEFKGLTRQEITTALAMDAAS >Mature_451_residues GLLRFAVKTFRLSLMRVGAGWMFALLTFNFNRVSISDLGAMAVIVTTLIGLHHFISFFQVYWGRFTDRYPIFGLRRTPYV ILSNVGAALIFLALPSIAVGLGERSIIATIEAFALIFLFGVLMAMNGSSSNALIAEVTTPKERGAVVAFIWATVIISGIV SAGISRVIMPVYSPEAMQQLYNLTPIIVTVTVLLGVIGLEKPISKEEHRKLLEQAPEKGEAGPLETWRVATGLMKRNPQV RGFFAFVLLAILGIFLQDAILEPFGAEVFGMPQKDTAAFQQAWGAGALLGMLGIGILSSIFPIQKKTIATLGGLGVAGGL AMLMISALTLHREIISPALLIMGLGIGLFNVGALAMMMEMTVEGQTGLYMGMWGMAQGLGNGFANVISGLGHTVMIEGGL VTPSVGYGLVFGLEALLMVLAIGILRGISVQEFKGLTRQEITTALAMDAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pucC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR004896 [H]
Pfam domain/function: PF03209 PUCC [H]
EC number: NA
Molecular weight: Translated: 48205; Mature: 48074
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLRFAVKTFRLSLMRVGAGWMFALLTFNFNRVSISDLGAMAVIVTTLIGLHHFISFFQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH VYWGRFTDRYPIFGLRRTPYVILSNVGAALIFLALPSIAVGLGERSIIATIEAFALIFLF HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH GVLMAMNGSSSNALIAEVTTPKERGAVVAFIWATVIISGIVSAGISRVIMPVYSPEAMQQ HHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LYNLTPIIVTVTVLLGVIGLEKPISKEEHRKLLEQAPEKGEAGPLETWRVATGLMKRNPQ HHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC VRGFFAFVLLAILGIFLQDAILEPFGAEVFGMPQKDTAAFQQAWGAGALLGMLGIGILSS HHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH IFPIQKKTIATLGGLGVAGGLAMLMISALTLHREIISPALLIMGLGIGLFNVGALAMMME HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MTVEGQTGLYMGMWGMAQGLGNGFANVISGLGHTVMIEGGLVTPSVGYGLVFGLEALLMV HHCCCCCCCEEHHHHHHHHHCCHHHHHHHCCCCEEEEECCEECCCHHHHHHHHHHHHHHH LAIGILRGISVQEFKGLTRQEITTALAMDAAS HHHHHHHCCCHHHHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure GLLRFAVKTFRLSLMRVGAGWMFALLTFNFNRVSISDLGAMAVIVTTLIGLHHFISFFQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH VYWGRFTDRYPIFGLRRTPYVILSNVGAALIFLALPSIAVGLGERSIIATIEAFALIFLF HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH GVLMAMNGSSSNALIAEVTTPKERGAVVAFIWATVIISGIVSAGISRVIMPVYSPEAMQQ HHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LYNLTPIIVTVTVLLGVIGLEKPISKEEHRKLLEQAPEKGEAGPLETWRVATGLMKRNPQ HHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC VRGFFAFVLLAILGIFLQDAILEPFGAEVFGMPQKDTAAFQQAWGAGALLGMLGIGILSS HHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH IFPIQKKTIATLGGLGVAGGLAMLMISALTLHREIISPALLIMGLGIGLFNVGALAMMME HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MTVEGQTGLYMGMWGMAQGLGNGFANVISGLGHTVMIEGGLVTPSVGYGLVFGLEALLMV HHCCCCCCCEEHHHHHHHHHCCHHHHHHHCCCCEEEEECCEECCCHHHHHHHHHHHHHHH LAIGILRGISVQEFKGLTRQEITTALAMDAAS HHHHHHHCCCHHHHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA